Project
GSE67402: E.coli regulatory changes under long-term starvation
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Results for AlaS
Z-value: 0.61
Transcription factors associated with AlaS
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
alaS
|
alaS | alanine—tRNA ligase DNA-binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| alaS | 0.99 | 7.6e-21 | Click! |
Activity profile of AlaS motif
Sorted Z-values of AlaS motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| alaS | 19.04 |
alaS
|
alanine-tRNA ligase |
Network of associatons between targets according to the STRING database.
First level regulatory network of AlaS
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.1 | 19.0 | GO:0006400 | tRNA modification(GO:0006400) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 19.0 | GO:0016020 | membrane(GO:0016020) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 3.8 | 19.0 | GO:0001141 | transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding(GO:0001141) bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding(GO:0001217) |