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GSE67402: E.coli regulatory changes under long-term starvation
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Results for ArsR
Z-value: 0.33
Transcription factors associated with ArsR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
arsR
|
arsR | ArsR DNA-binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| arsR | -0.15 | 4.5e-01 | Click! |
Activity profile of ArsR motif
Sorted Z-values of ArsR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arsRBC | 5.48 |
arsB
arsR
arsC
|
arsenite/antimonite:H+ antiporter ArsR DNA-binding transcriptional repressor arsenate reductase |
Network of associatons between targets according to the STRING database.
First level regulatory network of ArsR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 5.5 | GO:0015698 | inorganic anion transport(GO:0015698) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 5.5 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 5.5 | GO:0015103 | inorganic anion transmembrane transporter activity(GO:0015103) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.1 | 5.5 | REACTOME METABOLISM OF PROTEINS | Genes involved in Metabolism of proteins |