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GSE67402: E.coli regulatory changes under long-term starvation
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Results for ChbR
Z-value: 0.18
Transcription factors associated with ChbR
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
chbR
|
chbR | ChbR DNA-binding transcriptional dual regulator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| chbR | 0.41 | 3.5e-02 | Click! |
Activity profile of ChbR motif
Sorted Z-values of ChbR motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chbBCARFG | 1.48 |
chbG
chbF
chbC
chbB
chbA
chbR
|
chito-oligosaccharide mono-deacetylase monoacetylchitobiose-6-phosphate hydrolase chitobiose PTS permease - ChbC subunit chitobiose PTS permease - ChbB subunit chitobiose PTS permease - ChbA subunit ChbR DNA-binding transcriptional dual regulator |
Network of associatons between targets according to the STRING database.
First level regulatory network of ChbR
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.5 | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system(GO:0009401) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.5 | 1.5 | GO:0008706 | 6-phospho-beta-glucosidase activity(GO:0008706) |