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GSE67402: E.coli regulatory changes under long-term starvation

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Results for CspA

Z-value: 0.86

Transcription factors associated with CspA

Gene Symbol Gene ID Gene Info
cspA
cspA CspA DNA-binding transcriptional activator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
cspA0.843.1e-08Click!

Activity profile of CspA motif

Sorted Z-values of CspA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
gyrA 23.47
gyrA
DNA gyrase, subunit A
hns 12.13
hns
H-NS DNA-binding transcriptional dual regulator

Network of associatons between targets according to the STRING database.

First level regulatory network of CspA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
7.8 23.5 GO:0006265 DNA topological change(GO:0006265)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 35.6 GO:0016020 membrane(GO:0016020)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
7.8 23.5 GO:0003916 DNA topoisomerase activity(GO:0003916)
1.7 12.1 GO:0003681 bent DNA binding(GO:0003681)