GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
deoR Links RegulonDB EcoCyc	deoR	DeoR DNA-binding transcriptional repressor

Promoter	Log-likelihood	Transcript	Gene	Gene Info
deoCABD Show fit	3.40		deoA Links RegulonDB EcoCyc Show fit deoB Links RegulonDB EcoCyc Show fit deoC Links RegulonDB EcoCyc Show fit deoD Links RegulonDB EcoCyc Show fit	thymidine phosphorylase / uracil phosphorylase phosphopentomutase deoxyribose-phosphate aldolase purine nucleoside phosphorylase
tsx Show fit	1.17		tsx Links RegulonDB EcoCyc Show fit	nucleoside channel; receptor of phage T6 and colicin K

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	3.4	GO:0009264	deoxyribonucleotide catabolic process(GO:0009264)
0.4	1.2	GO:0051806	entry into host cell(GO:0030260) entry into host(GO:0044409) entry into cell of other organism involved in symbiotic interaction(GO:0051806) entry into other organism involved in symbiotic interaction(GO:0051828)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	1.2	GO:0046930	pore complex(GO:0046930)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.1	3.4	GO:0004731	purine-nucleoside phosphorylase activity(GO:0004731)
0.2	0.8	GO:0005337	nucleoside transmembrane transporter activity(GO:0005337) nucleobase-containing compound transmembrane transporter activity(GO:0015932)