Project
GSE67402: E.coli regulatory changes under long-term starvation
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Results for GutM
Z-value: 0.25
Transcription factors associated with GutM
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
gutM
|
gutM | GutM DNA-binding transcriptional activator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| gutM | 0.82 | 2.1e-07 | Click! |
Activity profile of GutM motif
Sorted Z-values of GutM motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| srlAEBD-gutM-srlR-gutQ | 2.96 |
srlB
srlA
srlE
srlD
gutQ
srlR
gutM
|
sorbitol PTS permease - SrlB subunit sorbitol PTS permease - SrlA subunit sorbitol PTS permease - SrlE subunit sorbitol-6-phosphate dehydrogenase D-arabinose 5-phosphate isomerase GutR DNA-binding transcriptional repressor GutM DNA-binding transcriptional activator |
Network of associatons between targets according to the STRING database.
First level regulatory network of GutM
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 3.0 | GO:0019407 | hexitol metabolic process(GO:0006059) hexitol catabolic process(GO:0019407) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 3.0 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 3.0 | GO:0019146 | arabinose-5-phosphate isomerase activity(GO:0019146) |