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GSE67402: E.coli regulatory changes under long-term starvation

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Results for IdnR

Z-value: 0.83

Transcription factors associated with IdnR

Gene Symbol Gene ID Gene Info
idnR
idnR IdnR transcriptional regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
idnR-0.881.0e-09Click!

Activity profile of IdnR motif

Sorted Z-values of IdnR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
idnK 14.25
idnK
D-gluconate kinase, thermosensitive
gntK 10.74
gntK
D-gluconate kinase, thermostable
gntKU 9.10
gntK
gntU
D-gluconate kinase, thermostable
gluconate transporter GntU

Network of associatons between targets according to the STRING database.

First level regulatory network of IdnR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
6.8 34.1 GO:0019521 D-gluconate metabolic process(GO:0019521) D-gluconate catabolic process(GO:0046177)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 8.2 GO:0005887 integral component of plasma membrane(GO:0005887)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
11.4 34.1 GO:0046316 gluconokinase activity(GO:0046316)