GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
lrhA Links RegulonDB EcoCyc	lrhA	LrhA DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
lrhA		0.89	4.3e-10	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
flhDC Show fit	5.03		flhC Links RegulonDB EcoCyc Show fit flhD Links RegulonDB EcoCyc Show fit	FlhC transcriptional dual regulator FlhD transcriptional dual regulator
lrhA Show fit	3.84		lrhA Links RegulonDB EcoCyc Show fit	LrhA DNA-binding transcriptional dual regulator

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	3.8	GO:1902680	positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)
0.0	5.0	GO:0097659	transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	3.8	GO:0000987	bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding(GO:0000986) core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)