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GSE67402: E.coli regulatory changes under long-term starvation

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Results for MqsA

Z-value: 0.93

Transcription factors associated with MqsA

Gene Symbol Gene ID Gene Info
mqsA
mqsA MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
mqsA0.634.0e-04Click!

Activity profile of MqsA motif

Sorted Z-values of MqsA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
mqsRA 25.43
mqsR
mqsA
mRNA interferase, toxin of the MqsR-MqsA toxin-antitoxin system
MqsA antitoxin of the MqsRA toxin-antitoxin system and DNA-binding transcriptional repressor
cspD 15.83
cspD
DNA replication inhibitor

Network of associatons between targets according to the STRING database.

First level regulatory network of MqsA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
6.4 25.4 GO:0043487 regulation of RNA stability(GO:0043487) regulation of mRNA stability(GO:0043488)
4.0 15.8 GO:0008156 negative regulation of DNA replication(GO:0008156) negative regulation of DNA metabolic process(GO:0051053)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 15.8 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 25.4 GO:0004521 endoribonuclease activity(GO:0004521)
1.4 15.8 GO:0003697 single-stranded DNA binding(GO:0003697)