GSE67402: E.coli regulatory changes under long-term starvation

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
paaX Links RegulonDB EcoCyc	paaX	PaaX DNA-binding transcriptional repressor

Promoter	Log-likelihood	Transcript	Gene	Gene Info
paaABCDEFGHIJK Show fit	18.28		paaB Links RegulonDB EcoCyc Show fit paaC Links RegulonDB EcoCyc Show fit paaA Links RegulonDB EcoCyc Show fit paaF Links RegulonDB EcoCyc Show fit paaG Links RegulonDB EcoCyc Show fit paaD Links RegulonDB EcoCyc Show fit paaE Links RegulonDB EcoCyc Show fit paaJ Links RegulonDB EcoCyc Show fit paaK Links RegulonDB EcoCyc Show fit paaH Links RegulonDB EcoCyc Show fit paaI Links RegulonDB EcoCyc Show fit	ring 1,2-phenylacetyl-CoA epoxidase subunit ring 1,2-phenylacetyl-CoA epoxidase, structural subunit ring 1,2-phenylacetyl-CoA epoxidase, monooxygenase subunit predicted 2,3-dehydroadipyl-CoA hydratase predicted ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming) phenylacetate degradation protein ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit β-ketoadipyl-CoA thiolase phenylacetate-CoA ligase 3-hydroxyadipyl-CoA dehydrogenase (NAD+) phenylacetyl-CoA thioesterase
paaZ Show fit	14.98		paaZ Links RegulonDB EcoCyc Show fit	oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
8.3	33.3	GO:0042178	xenobiotic catabolic process(GO:0042178)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	18.3	GO:0005829	cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.7	33.3	GO:0004300	enoyl-CoA hydratase activity(GO:0004300)