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GSE67402: E.coli regulatory changes under long-term starvation
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Results for RelB
Z-value: 0.42
Transcription factors associated with RelB
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
relB
|
relB | RelB Qin prophage; antitoxin of the RelE-RelB toxin-antitoxin system and DNA binding transcriptional repressor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| relB | 0.23 | 2.6e-01 | Click! |
Activity profile of RelB motif
Sorted Z-values of RelB motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| relBE-hokD | 7.36 |
relB
hokD
relE
|
RelB Qin prophage; antitoxin of the RelE-RelB toxin-antitoxin system and DNA binding transcriptional repressor Qin prophage; small toxic polypeptide Qin prophage; toxin of the RelE-RelB toxin-antitoxin system and cofactor to enhance the repressor activity of RelB |
Network of associatons between targets according to the STRING database.
First level regulatory network of RelB
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.9 | 7.4 | GO:0006402 | mRNA catabolic process(GO:0006402) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 7.4 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.5 | 7.4 | GO:0004521 | endoribonuclease activity(GO:0004521) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 2.5 | 7.4 | PID IL12 2PATHWAY | IL12-mediated signaling events |