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GSE67402: E.coli regulatory changes under long-term starvation

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Results for UidR

Z-value: 0.37

Transcription factors associated with UidR

Gene Symbol Gene ID Gene Info
uidR
uidR UidR DNA-binding transcriptional repressor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
uidR-0.193.5e-01Click!

Activity profile of UidR motif

Sorted Z-values of UidR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
uidABC 3.17
uidB
uidC
uidA
glucuronide:H+ symporter
outer membrane-associated protein
β-D-glucuronidase
uidR 2.68
uidR
UidR DNA-binding transcriptional repressor

Network of associatons between targets according to the STRING database.

First level regulatory network of UidR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 3.2 GO:1901658 glycosyl compound catabolic process(GO:1901658)
0.0 2.7 GO:1903507 negative regulation of transcription, DNA-templated(GO:0045892) negative regulation of RNA biosynthetic process(GO:1902679) negative regulation of nucleic acid-templated transcription(GO:1903507)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.2 GO:0043227 membrane-bounded organelle(GO:0043227) intracellular membrane-bounded organelle(GO:0043231)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 3.2 GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553)
0.1 2.7 GO:0000976 transcription regulatory region sequence-specific DNA binding(GO:0000976)