Project
GSE67402: E.coli regulatory changes under long-term starvation
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Results for Zur
Z-value: 1.26
Transcription factors associated with Zur
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
zur
|
zur | Zur transcriptional repressor |
Activity profile of Zur motif
Sorted Z-values of Zur motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| ykgMO | 20.60 |
ykgM
ykgO
|
predicted ribosomal protein predicted ribosomal protein |
|
| zinT | 18.10 |
zinT
|
cadmium-induced cadmium binding protein |
|
| znuA | 11.14 |
znuA
|
Zn2+ ABC transporter - periplasmic binding protein |
|
| znuCB | 3.50 |
znuC
znuB
|
Zn2+ ABC transporter - ATP binding subunit Zn2+ ABC transporter - membrane subunit |
Network of associatons between targets according to the STRING database.
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 6.0 | 18.1 | GO:0046686 | response to cadmium ion(GO:0046686) |
| 2.8 | 11.1 | GO:0072511 | divalent metal ion transport(GO:0070838) divalent inorganic cation transport(GO:0072511) |
| 0.9 | 3.5 | GO:0010043 | response to zinc ion(GO:0010043) |
| 0.9 | 20.6 | GO:0009267 | cellular response to starvation(GO:0009267) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 3.5 | GO:0043190 | ATP-binding cassette (ABC) transporter complex(GO:0043190) ATPase dependent transmembrane transport complex(GO:0098533) ATPase complex(GO:1904949) |
| 0.3 | 29.2 | GO:0042597 | periplasmic space(GO:0042597) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.2 | 3.5 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
| 0.3 | 29.2 | GO:0008270 | zinc ion binding(GO:0008270) |