Project
GSE80451: E.coli grown aerobically and anaerobically
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Results for FhlA
Z-value: 0.20
Transcription factors associated with FhlA
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
fhlA
|
fhlA | FhlA transcriptional activator |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| fhlA | 0.83 | 8.3e-02 | Click! |
Activity profile of FhlA motif
Sorted Z-values of FhlA motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| hycABCDEFGHI | 0.20 |
hycD
hycE
hycF
hycG
hycA
hycB
hycC
hycH
hycI
|
hydrogenase 3, membrane subunit hydrogenase 3, large subunit formate hydrogenlyase complex iron-sulfur protein hydrogenase 3 and formate hydrogenlyase complex, HycG subunit regulator of the transcriptional regulator FhlA hydrogenase 3, Fe-S subunit hydrogenase 3, membrane subunit protein required for maturation of hydrogenase 3 hydrogenase 3 maturation protease |
|
| hypABCDE | 0.09 |
hypE
hypD
hypA
hypC
hypB
|
hydrogenase maturation protein, carbamoyl dehydratase HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor accessory protein for nickel incorporation into hydrogenase 3 HypC, protein involved in hydrogenase 3 maturation accessory protein for nickel incorporation into hydrogenase isoenzymes |
|
| hypABCDE-fhlA | 0.08 |
fhlA
hypE
hypD
hypA
hypC
hypB
|
FhlA transcriptional activator hydrogenase maturation protein, carbamoyl dehydratase HypD, scaffold protein for assembly of the Fe-(CN)2CO cofactor accessory protein for nickel incorporation into hydrogenase 3 HypC, protein involved in hydrogenase 3 maturation accessory protein for nickel incorporation into hydrogenase isoenzymes |
|
| hydN-hypF | 0.06 |
hypF
hydN
|
hydrogenase maturation protein, carbamoyltransferase putative electron transport protein HydN |
Network of associatons between targets according to the STRING database.
First level regulatory network of FhlA
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0018249 | protein dehydration(GO:0018249) peptidyl-S-carbamoyl-L-cysteine dehydration(GO:0046892) |
| 0.0 | 0.2 | GO:0016485 | protein processing(GO:0016485) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0070025 | carbon monoxide binding(GO:0070025) |
| 0.0 | 0.2 | GO:0016151 | nickel cation binding(GO:0016151) |
| 0.0 | 0.1 | GO:0016743 | carboxyl- or carbamoyltransferase activity(GO:0016743) |