GSE80451: E.coli grown aerobically and anaerobically
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
gadE | -0.52 | 3.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
purA Show fit | 0.98 |
adenylosuccinate synthetase |
||
cyoABCDE Show fit | 0.94 |
cytochrome bo terminal oxidase subunit II cytochrome bo terminal oxidase subunit III cytochrome bo terminal oxidase subunit I heme O synthase cytochrome bo terminal oxidase subunit IV |
||
gltBDF Show fit | 0.62 |
glutamate synthase, large subunit glutamate synthase, small subunit periplasmic protein |
||
gadX Show fit | 0.48 |
GadX DNA-binding transcriptional dual regulator |
||
gadXW Show fit | 0.33 |
GadW DNA-binding transcriptional dual regulator GadX DNA-binding transcriptional dual regulator |
||
gadE-mdtEF Show fit | 0.33 |
MdtEF-TolC multidrug efflux pump - permease subunit MdtEF-TolC multidrug efflux pump - membrane fusion protein GadE DNA-binding transcriptional activator |
||
gnd Show fit | 0.18 |
6-phosphogluconate dehydrogenase, decarboxylating |
||
hdeAB-yhiD Show fit | 0.15 |
inner membrane protein YhiD HdeB monomer HdeA monomer, chaperone active form |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.0 | GO:0046040 | IMP metabolic process(GO:0046040) |
0.2 | 0.9 | GO:1902600 | aerobic electron transport chain(GO:0019646) hydrogen ion transmembrane transport(GO:1902600) |
0.0 | 0.8 | GO:0051254 | positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508) |
0.2 | 0.6 | GO:0019676 | ammonia assimilation cycle(GO:0019676) |
0.0 | 0.3 | GO:0006855 | drug transmembrane transport(GO:0006855) |
0.0 | 0.2 | GO:0046177 | D-gluconate metabolic process(GO:0019521) D-gluconate catabolic process(GO:0046177) |
0.0 | 0.1 | GO:0071468 | cellular response to acidic pH(GO:0071468) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 0.9 | GO:0070069 | cytochrome complex(GO:0070069) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | GO:0016879 | ligase activity, forming carbon-nitrogen bonds(GO:0016879) |
0.2 | 0.9 | GO:0004659 | prenyltransferase activity(GO:0004659) ubiquinone binding(GO:0048039) |
0.1 | 0.8 | GO:0001140 | transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding(GO:0001140) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216) |
0.1 | 0.6 | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors(GO:0016638) |
0.0 | 0.3 | GO:0015238 | drug transmembrane transporter activity(GO:0015238) |
0.0 | 0.1 | GO:0051087 | chaperone binding(GO:0051087) |