GSE80451: E.coli grown aerobically and anaerobically

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
gadW Links RegulonDB EcoCyc	gadW	GadW DNA-binding transcriptional dual regulator

Gene	Promoter	Pearson corr. coef.	P-value	Plot
gadW		0.99	2.0e-03	Click!
gadX		0.98	2.4e-03	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
slp-dctR Show fit	1.23		slp Links RegulonDB EcoCyc Show fit dctR Links RegulonDB EcoCyc Show fit	starvation lipoprotein predicted DNA-binding transcriptional regulator
gadBC Show fit	1.04		gadB Links RegulonDB EcoCyc Show fit gadC Links RegulonDB EcoCyc Show fit	glutamate decarboxylase B subunit glutamic acid:4-aminobutyrate antiporter
gadW Show fit	0.52		gadW Links RegulonDB EcoCyc Show fit	GadW DNA-binding transcriptional dual regulator
gadAX Show fit	0.15		gadX Links RegulonDB EcoCyc Show fit gadA Links RegulonDB EcoCyc Show fit	GadX DNA-binding transcriptional dual regulator glutamate decarboxylase A subunit
gadXW Show fit	0.05		gadW Links RegulonDB EcoCyc Show fit gadX Links RegulonDB EcoCyc Show fit	GadW DNA-binding transcriptional dual regulator GadX DNA-binding transcriptional dual regulator

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	1.2	GO:0031329	regulation of cellular catabolic process(GO:0031329) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.3	1.2	GO:0051454	pH elevation(GO:0045852) intracellular pH elevation(GO:0051454)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.2	GO:0019867	outer membrane(GO:0019867)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.0	GO:0015297	antiporter activity(GO:0015297)
0.0	0.1	GO:0001216	transcriptional activator activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding(GO:0001140) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)