Project

GSE80451: E.coli grown aerobically and anaerobically

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Results for GatR

Z-value: 0.30

Transcription factors associated with GatR

Gene Symbol Gene ID Gene Info
gatR DNA-binding transcriptional repressor GatR N-terminal fragment

Activity profile of GatR motif

Sorted Z-values of GatR motif

Promoter Log-likelihood Transcript Gene Gene Info
gatYZABCD 0.88 tagatose-1,6-bisphosphate aldolase 2 subunit GatY
tagatose-1,6-bisphosphate aldolase 2 subunit GatZ
L-galactitol-1-phosphate 5-dehydrogenase
galactitol PTS permease - GatA subunit
galactitol PTS permease - GatB subunit
galactitol PTS permease - GatC subunit

Network of associatons between targets according to the STRING database.

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 GO:0006059 hexitol metabolic process(GO:0006059) hexitol catabolic process(GO:0019407)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 GO:0090563 protein-phosphocysteine-sugar phosphotransferase activity(GO:0090563)