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GSE80451: E.coli grown aerobically and anaerobically

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Results for LrhA

Z-value: 0.83

Transcription factors associated with LrhA

Gene Symbol Gene ID Gene Info
lrhA
lrhA LrhA DNA-binding transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
lrhA0.991.3e-03Click!

Activity profile of LrhA motif

Sorted Z-values of LrhA motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
fimE 2.22
fimE
regulator for fimA
lrhA 2.19
lrhA
LrhA DNA-binding transcriptional dual regulator
flhDC 2.07
flhC
flhD
FlhC transcriptional dual regulator
FlhD transcriptional dual regulator

Network of associatons between targets according to the STRING database.

First level regulatory network of LrhA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.2 GO:0015074 DNA integration(GO:0015074)
0.0 2.2 GO:1902680 positive regulation of transcription, DNA-templated(GO:0045893) positive regulation of RNA metabolic process(GO:0051254) positive regulation of RNA biosynthetic process(GO:1902680) positive regulation of nucleic acid-templated transcription(GO:1903508)
0.0 2.1 GO:0097659 transcription, DNA-templated(GO:0006351) nucleic acid-templated transcription(GO:0097659)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.2 GO:0000987 bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding(GO:0000986) core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)