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GSE80451: E.coli grown aerobically and anaerobically

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Results for TorR

Z-value: 0.31

Transcription factors associated with TorR

Gene Symbol Gene ID Gene Info
torR
torR TorR transcriptional dual regulator

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
torR-0.276.6e-01Click!

Activity profile of TorR motif

Sorted Z-values of TorR motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
tnaC 0.83
tnaC
tryptophanase operon leader peptide
hdeAB-yhiD 0.18
yhiD
hdeB
hdeA
inner membrane protein YhiD
HdeB monomer
HdeA monomer, chaperone active form
torR 0.13
torR
TorR transcriptional dual regulator
tnaCAB 0.11
tnaA
tnaC
tnaB
tryptophanase
tryptophanase operon leader peptide
tryptophan:H+ symporter TnaB
gadAX 0.02
gadX
gadA
GadX DNA-binding transcriptional dual regulator
glutamate decarboxylase A subunit

Network of associatons between targets according to the STRING database.

First level regulatory network of TorR

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238) regulation of tryptophan metabolic process(GO:0090357)
0.0 0.2 GO:0071468 cellular response to acidic pH(GO:0071468)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)