GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Alx4 Links NCBI RGD Ensembl	ENSRNOG00000000008	ALX homeobox 4

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Alx4	rn6_v1_chr3_+_82548959_82548959	-0.26	6.7e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_-_88670430 Show fit	0.79	ENSRNOT00000025547	Hcrt Links NCBI RGD Ensembl Show fit	hypocretin neuropeptide precursor
chr4_+_148782479 Show fit	0.37	ENSRNOT00000018133	LOC500300 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC6835
chr12_-_2174131 Show fit	0.30	ENSRNOT00000001313	Pcp2 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 2
chr7_-_28711761 Show fit	0.28	ENSRNOT00000006249	Parpbp Links NCBI RGD Ensembl Show fit	PARP1 binding protein
chr15_+_37790141 Show fit	0.26	ENSRNOT00000076392 ENSRNOT00000091953	Il17d Links NCBI RGD Ensembl Show fit	interleukin 17D
chr2_+_58724855 Show fit	0.25	ENSRNOT00000089609	Capsl Links NCBI RGD Ensembl Show fit	calcyphosine-like
chr17_-_61332391 Show fit	0.23	ENSRNOT00000034599	LOC100362965 Links NCBI RGD Ensembl Show fit	SNRPN upstream reading frame protein-like
chr2_+_145174876 Show fit	0.20	ENSRNOT00000040631	Mab21l1 Links NCBI RGD Ensembl Show fit	mab-21 like 1
chr5_-_17061361 Show fit	0.19	ENSRNOT00000089318	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chr6_+_8886591 Show fit	0.16	ENSRNOT00000091510 ENSRNOT00000089174	Six3 Links NCBI RGD Ensembl Show fit	SIX homeobox 3
chr8_+_22559098 Show fit	0.16	ENSRNOT00000041091	LOC691141 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691141
chr5_+_50381244 Show fit	0.15	ENSRNOT00000012385	Cga Links NCBI RGD Ensembl Show fit	glycoprotein hormones, alpha polypeptide
chr5_-_17061837 Show fit	0.14	ENSRNOT00000011892	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chr5_-_134927235 Show fit	0.14	ENSRNOT00000016751	Uqcrh Links NCBI RGD Ensembl Show fit	ubiquinol-cytochrome c reductase hinge protein
chr2_+_158097843 Show fit	0.14	ENSRNOT00000016541	Ptx3 Links NCBI RGD Ensembl Show fit	pentraxin 3
chr3_+_159368273 Show fit	0.14	ENSRNOT00000041688	Sgk2 Links NCBI RGD Ensembl Show fit	serum/glucocorticoid regulated kinase 2
chrX_+_144994139 Show fit	0.13	ENSRNOT00000071783	LOC102546596 Links NCBI RGD Ensembl Show fit	pre-mRNA-splicing factor CWC22 homolog
chr10_+_69412017 Show fit	0.13	ENSRNOT00000009448	Ccl2 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 2
chr11_+_36851038 Show fit	0.12	ENSRNOT00000002221 ENSRNOT00000061047	Pcp4 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4
chr10_+_43601689 Show fit	0.12	ENSRNOT00000029238	Mrpl22 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L22
chr10_-_91047177 Show fit	0.11	ENSRNOT00000003986	C1ql1 Links NCBI RGD Ensembl Show fit	complement C1q like 1
chr13_-_50514151 Show fit	0.11	ENSRNOT00000003951	Ren Links NCBI RGD Ensembl Show fit	renin
chr14_-_115052450 Show fit	0.10	ENSRNOT00000067998	Acyp2 Links NCBI RGD Ensembl Show fit	acylphosphatase 2
chr20_+_44680449 Show fit	0.10	ENSRNOT00000000728	Traf3ip2 Links NCBI RGD Ensembl Show fit	Traf3 interacting protein 2
chr15_+_108318664 Show fit	0.10	ENSRNOT00000057469	Ubac2 Links NCBI RGD Ensembl Show fit	UBA domain containing 2
chr12_+_50407843 Show fit	0.10	ENSRNOT00000073763	Cryba4 Links NCBI RGD Ensembl Show fit	crystallin, beta A4
chr6_-_104290579 Show fit	0.09	ENSRNOT00000066014	Erh Links NCBI RGD Ensembl Show fit	enhancer of rudimentary homolog (Drosophila)
chr4_+_169147243 Show fit	0.09	ENSRNOT00000011580	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr10_+_64174931 Show fit	0.09	ENSRNOT00000035948	RGD1565611 Links NCBI RGD Ensembl Show fit	RGD1565611
chr3_-_102826379 Show fit	0.09	ENSRNOT00000073423	Olr769 Links NCBI RGD Ensembl Show fit	olfactory receptor 769
chr4_-_157304653 Show fit	0.09	ENSRNOT00000051613	Lrrc23 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 23
chr9_+_20241062 Show fit	0.08	ENSRNOT00000071593	LOC100911585 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing protein 23-like
chr14_+_5928737 Show fit	0.08	ENSRNOT00000071877 ENSRNOT00000040985 ENSRNOT00000074889	Mpa2l Links NCBI RGD Ensembl Show fit	macrophage activation 2 like
chr1_+_150310319 Show fit	0.08	ENSRNOT00000042081	Olr34 Links NCBI RGD Ensembl Show fit	olfactory receptor 34
chr4_+_117962319 Show fit	0.08	ENSRNOT00000057441	Tgfa Links NCBI RGD Ensembl Show fit	transforming growth factor alpha
chr20_-_10013190 Show fit	0.08	ENSRNOT00000084726 ENSRNOT00000089112	Rsph1 Links NCBI RGD Ensembl Show fit	radial spoke head 1 homolog
chr9_+_61692154 Show fit	0.08	ENSRNOT00000082300	Hspe1 Links NCBI RGD Ensembl Show fit	heat shock protein family E member 1
chr20_+_4966817 Show fit	0.08	ENSRNOT00000081527 ENSRNOT00000081265	Lsm2 Links NCBI RGD Ensembl Show fit	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr15_-_29369504 Show fit	0.08	ENSRNOT00000060297	AABR07017624.1 Links NCBI RGD Ensembl Show fit
chr19_+_26142720 Show fit	0.08	ENSRNOT00000005270	RGD1564093 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2310036O22
chr8_+_71914867 Show fit	0.08	ENSRNOT00000023372	Dapk2 Links NCBI RGD Ensembl Show fit	death-associated protein kinase 2
chr11_+_36555416 Show fit	0.07	ENSRNOT00000064981	Sh3bgr Links NCBI RGD Ensembl Show fit	SH3 domain binding glutamate-rich protein
chr20_+_42966140 Show fit	0.07	ENSRNOT00000000707	Marcks Links NCBI RGD Ensembl Show fit	myristoylated alanine rich protein kinase C substrate
chr10_-_29026002 Show fit	0.07	ENSRNOT00000005070	Pttg1 Links NCBI RGD Ensembl Show fit	pituitary tumor-transforming 1
chr4_+_88328061 Show fit	0.07	ENSRNOT00000084775	Vom1r87 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 87
chr8_+_117117430 Show fit	0.07	ENSRNOT00000073247	Gpx1 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 1
chr10_-_105668593 Show fit	0.07	ENSRNOT00000016622	St6galnac2 Links NCBI RGD Ensembl Show fit	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
chr10_-_34961608 Show fit	0.07	ENSRNOT00000033056	LOC103689931 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A/B
chrX_-_14972675 Show fit	0.07	ENSRNOT00000079664	Slc38a5 Links NCBI RGD Ensembl Show fit	solute carrier family 38, member 5
chr2_+_88217188 Show fit	0.07	ENSRNOT00000014267	Car1 Links NCBI RGD Ensembl Show fit	carbonic anhydrase I
chr11_+_46184871 Show fit	0.07	ENSRNOT00000048417	Tfg Links NCBI RGD Ensembl Show fit	Trk-fused gene
chrX_-_77559348 Show fit	0.07	ENSRNOT00000047823	Fndc3c1 Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 3C1
chr11_-_87403367 Show fit	0.07	ENSRNOT00000057751	Thap7 Links NCBI RGD Ensembl Show fit	THAP domain containing 7
chr2_+_187447501 Show fit	0.07	ENSRNOT00000038589	Iqgap3 Links NCBI RGD Ensembl Show fit	IQ motif containing GTPase activating protein 3
chr2_-_185852759 Show fit	0.06	ENSRNOT00000049461	Mab21l2 Links NCBI RGD Ensembl Show fit	mab-21 like 2
chrM_+_7758 Show fit	0.06	ENSRNOT00000046201	Mt-atp8 Links NCBI RGD Ensembl Show fit	mitochondrially encoded ATP synthase 8
chr19_-_37938857 Show fit	0.06	ENSRNOT00000026730	Slc12a4 Links NCBI RGD Ensembl Show fit	solute carrier family 12 member 4
chr17_-_43776460 Show fit	0.06	ENSRNOT00000089055	Hist2h3c2 Links NCBI RGD Ensembl Show fit	histone cluster 2, H3c2
chr3_-_82368357 Show fit	0.06	ENSRNOT00000000052	Cd82 Links NCBI RGD Ensembl Show fit	Cd82 molecule
chr4_+_155321553 Show fit	0.06	ENSRNOT00000089614	Mfap5 Links NCBI RGD Ensembl Show fit	microfibrillar associated protein 5
chrX_+_106523278 Show fit	0.06	ENSRNOT00000070802	MGC109340 Links NCBI RGD Ensembl Show fit	similar to Microsomal signal peptidase 23 kDa subunit (SPase 22 kDa subunit) (SPC22/23)
chr18_+_68408890 Show fit	0.06	ENSRNOT00000039702	Ccdc68 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 68
chr4_+_144382945 Show fit	0.06	ENSRNOT00000007601	Cav3 Links NCBI RGD Ensembl Show fit	caveolin 3
chr7_+_2459141 Show fit	0.06	ENSRNOT00000075681	Naca Links NCBI RGD Ensembl Show fit	nascent polypeptide-associated complex alpha subunit
chr5_-_38923095 Show fit	0.06	ENSRNOT00000009146	AABR07047593.1 Links NCBI RGD Ensembl Show fit
chr6_+_49825469 Show fit	0.06	ENSRNOT00000006921	Fam150b Links NCBI RGD Ensembl Show fit	family with sequence similarity 150, member B
chr2_+_188583664 Show fit	0.06	ENSRNOT00000045477	Dpm3 Links NCBI RGD Ensembl Show fit	dolichyl-phosphate mannosyltransferase subunit 3
chr6_-_7058314 Show fit	0.06	ENSRNOT00000045996	Haao Links NCBI RGD Ensembl Show fit	3-hydroxyanthranilate 3,4-dioxygenase
chr7_+_2458833 Show fit	0.06	ENSRNOT00000085092	Naca Links NCBI RGD Ensembl Show fit	nascent polypeptide-associated complex alpha subunit
chr6_+_47940183 Show fit	0.06	ENSRNOT00000011951	Adi1 Links NCBI RGD Ensembl Show fit	acireductone dioxygenase 1
chr2_+_80269661 Show fit	0.06	ENSRNOT00000015975	AABR07008940.1 Links NCBI RGD Ensembl Show fit
chr3_+_7884822 Show fit	0.06	ENSRNOT00000019157	Med27 Links NCBI RGD Ensembl Show fit	mediator complex subunit 27
chr4_+_6827429 Show fit	0.06	ENSRNOT00000071737	Rheb Links NCBI RGD Ensembl Show fit	Ras homolog enriched in brain
chr14_+_82769642 Show fit	0.06	ENSRNOT00000065393	Ctbp1 Links NCBI RGD Ensembl Show fit	C-terminal binding protein 1
chr1_+_213636093 Show fit	0.06	ENSRNOT00000019642	Psmd13 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 13
chr15_-_95514259 Show fit	0.06	ENSRNOT00000038433	Slitrk6 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 6
chr9_+_100829552 Show fit	0.06	ENSRNOT00000024695	Bok Links NCBI RGD Ensembl Show fit	BOK, BCL2 family apoptosis regulator
chr8_+_126975833 Show fit	0.06	ENSRNOT00000088348	AABR07071701.1 Links NCBI RGD Ensembl Show fit
chr5_-_22769907 Show fit	0.05	ENSRNOT00000047805 ENSRNOT00000076167 ENSRNOT00000076507 ENSRNOT00000076113 ENSRNOT00000083779	Asph Links NCBI RGD Ensembl Show fit	aspartate-beta-hydroxylase
chr10_-_40381886 Show fit	0.05	ENSRNOT00000050213	LOC100912427 Links NCBI RGD Ensembl Show fit	nuclease-sensitive element-binding protein 1-like
chr3_+_22964230 Show fit	0.05	ENSRNOT00000041813	LOC100362149 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr2_+_188784222 Show fit	0.05	ENSRNOT00000028095	Pmvk Links NCBI RGD Ensembl Show fit	phosphomevalonate kinase
chr1_-_141504111 Show fit	0.05	ENSRNOT00000040164	Snrpep2 Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide E pseudogene 2
chr3_-_111087347 Show fit	0.05	ENSRNOT00000018277	Rhov Links NCBI RGD Ensembl Show fit	ras homolog family member V
chr1_+_229416489 Show fit	0.05	ENSRNOT00000028617	Olr336 Links NCBI RGD Ensembl Show fit	olfactory receptor 336
chrY_-_1305026 Show fit	0.05	ENSRNOT00000092901	Usp9y Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 9, Y-linked
chr4_+_169161585 Show fit	0.05	ENSRNOT00000079785	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr3_-_4341771 Show fit	0.05	ENSRNOT00000034694	LOC684988 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S13
chr10_+_83476107 Show fit	0.05	ENSRNOT00000075733	Phb Links NCBI RGD Ensembl Show fit	prohibitin
chr1_-_148443358 Show fit	0.05	ENSRNOT00000072973	Vbp1 Links NCBI RGD Ensembl Show fit	VHL binding protein 1
chr5_-_99033107 Show fit	0.05	ENSRNOT00000041306	Hspa8 Links NCBI RGD Ensembl Show fit	heat shock protein family A (Hsp70) member 8
chr2_-_123972356 Show fit	0.05	ENSRNOT00000023348	Il21 Links NCBI RGD Ensembl Show fit	interleukin 21
chr13_+_56096834 Show fit	0.05	ENSRNOT00000035129	Dennd1b Links NCBI RGD Ensembl Show fit	DENN domain containing 1B
chr8_+_100260049 Show fit	0.05	ENSRNOT00000011090	AABR07071101.1 Links NCBI RGD Ensembl Show fit
chr1_-_107373807 Show fit	0.05	ENSRNOT00000056024	Svip Links NCBI RGD Ensembl Show fit	small VCP interacting protein
chr17_+_44794130 Show fit	0.05	ENSRNOT00000077571	Hist1h2ac Links NCBI RGD Ensembl Show fit	histone cluster 1, H2ac
chr3_+_3389612 Show fit	0.05	ENSRNOT00000041984	Rpl8 Links NCBI RGD Ensembl Show fit	ribosomal protein L8
chr20_+_19325121 Show fit	0.05	ENSRNOT00000058151	Phyhipl Links NCBI RGD Ensembl Show fit	phytanoyl-CoA 2-hydroxylase interacting protein-like
chr9_-_1012450 Show fit	0.05	ENSRNOT00000051449	LOC100359951 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr20_+_3176107 Show fit	0.05	ENSRNOT00000001036	RT1-S3 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus S3
chr2_-_147392062 Show fit	0.05	ENSRNOT00000021535	Tm4sf1 Links NCBI RGD Ensembl Show fit	transmembrane 4 L six family member 1
chr4_+_29535852 Show fit	0.05	ENSRNOT00000087619	NEWGENE_621351 Links NCBI RGD Ensembl Show fit	collagen, type I, alpha 2
chr18_+_70739492 Show fit	0.05	ENSRNOT00000085601	Acaa2 Links NCBI RGD Ensembl Show fit	acetyl-CoA acyltransferase 2
chr2_+_93758919 Show fit	0.04	ENSRNOT00000077782	Fabp12 Links NCBI RGD Ensembl Show fit	fatty acid binding protein 12
chr2_+_239415046 Show fit	0.04	ENSRNOT00000072196	Cxxc4 Links NCBI RGD Ensembl Show fit	CXXC finger protein 4
chr12_+_4310334 Show fit	0.04	ENSRNOT00000041244	Vom2r60 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 60
chr13_-_102857551 Show fit	0.04	ENSRNOT00000080309	Mark1 Links NCBI RGD Ensembl Show fit	microtubule affinity regulating kinase 1
chr4_-_115208026 Show fit	0.04	ENSRNOT00000084388 ENSRNOT00000066678	Dguok Links NCBI RGD Ensembl Show fit	deoxyguanosine kinase
chr4_+_6946634 Show fit	0.04	ENSRNOT00000040373	Wdr86 Links NCBI RGD Ensembl Show fit	WD repeat domain 86
chr1_-_225594958 Show fit	0.04	ENSRNOT00000027492	Scgb1d2 Links NCBI RGD Ensembl Show fit	secretoglobin, family 1D, member 2
chr11_-_62067655 Show fit	0.04	ENSRNOT00000093382	Zbtb20 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 20
chrX_+_29504349 Show fit	0.04	ENSRNOT00000005981	Tceanc Links NCBI RGD Ensembl Show fit	transcription elongation factor A N-terminal and central domain containing
chr16_+_2537248 Show fit	0.04	ENSRNOT00000017995	Asb14 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 14
chr5_+_28485619 Show fit	0.04	ENSRNOT00000093341 ENSRNOT00000093129	LOC100912373 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100912373
chr3_+_173799833 Show fit	0.04	ENSRNOT00000081235	Phactr3 Links NCBI RGD Ensembl Show fit	phosphatase and actin regulator 3
chr20_-_5020150 Show fit	0.04	ENSRNOT00000001146	Sapcd1 Links NCBI RGD Ensembl Show fit	suppressor APC domain containing 1
chr2_+_187951344 Show fit	0.04	ENSRNOT00000027123	Ssr2 Links NCBI RGD Ensembl Show fit	signal sequence receptor, beta
chr15_-_37830131 Show fit	0.04	ENSRNOT00000075861	Eef1akmt1 Links NCBI RGD Ensembl Show fit	eukaryotic translation elongation factor 1 alpha lysine methyltransferase 1
chr10_+_106812739 Show fit	0.04	ENSRNOT00000074225	Syngr2 Links NCBI RGD Ensembl Show fit	synaptogyrin 2
chr13_-_80862963 Show fit	0.04	ENSRNOT00000004864	Fmo3 Links NCBI RGD Ensembl Show fit	flavin containing monooxygenase 3
chr5_+_145311375 Show fit	0.04	ENSRNOT00000019224	Smim12 Links NCBI RGD Ensembl Show fit	small integral membrane protein 12
chr14_-_6900733 Show fit	0.04	ENSRNOT00000061224	Dmp1 Links NCBI RGD Ensembl Show fit	dentin matrix acidic phosphoprotein 1
chr20_+_8484311 Show fit	0.04	ENSRNOT00000050041	LOC100364116 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr9_+_10941613 Show fit	0.04	ENSRNOT00000070794	Sema6b Links NCBI RGD Ensembl Show fit	semaphorin 6B
chr10_-_86393141 Show fit	0.04	ENSRNOT00000009485	Mien1 Links NCBI RGD Ensembl Show fit	migration and invasion enhancer 1
chr2_-_170301348 Show fit	0.04	ENSRNOT00000088131	Si Links NCBI RGD Ensembl Show fit	sucrase-isomaltase
chrX_-_121731543 Show fit	0.04	ENSRNOT00000018788	Klhl13 Links NCBI RGD Ensembl Show fit	kelch-like family member 13
chr2_-_158156444 Show fit	0.04	ENSRNOT00000088559	Veph1 Links NCBI RGD Ensembl Show fit	ventricular zone expressed PH domain-containing 1
chr1_-_89014189 Show fit	0.04	ENSRNOT00000028413	Lin37 Links NCBI RGD Ensembl Show fit	lin-37 DREAM MuvB core complex component
chr11_-_17684903 Show fit	0.04	ENSRNOT00000051213	Tmprss15 Links NCBI RGD Ensembl Show fit	transmembrane protease, serine 15
chr9_-_95362014 Show fit	0.04	ENSRNOT00000051065	Hjurp Links NCBI RGD Ensembl Show fit	Holliday junction recognition protein
chr2_-_143104412 Show fit	0.04	ENSRNOT00000058116	Ufm1 Links NCBI RGD Ensembl Show fit	ubiquitin-fold modifier 1
chr16_-_36161089 Show fit	0.04	ENSRNOT00000017888	Scrg1 Links NCBI RGD Ensembl Show fit	stimulator of chondrogenesis 1
chr2_+_122877286 Show fit	0.04	ENSRNOT00000033080	Arse Links NCBI RGD Ensembl Show fit	arylsulfatase E
chr6_+_56846789 Show fit	0.04	ENSRNOT00000032108	Agmo Links NCBI RGD Ensembl Show fit	alkylglycerol monooxygenase
chr16_-_7758189 Show fit	0.04	ENSRNOT00000026588	Hacl1 Links NCBI RGD Ensembl Show fit	2-hydroxyacyl-CoA lyase 1
chr10_-_83898527 Show fit	0.04	ENSRNOT00000009815	Atp5g1 Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
chr1_-_189238776 Show fit	0.04	ENSRNOT00000020817	Pdilt Links NCBI RGD Ensembl Show fit	protein disulfide isomerase-like, testis expressed
chr13_+_76962504 Show fit	0.04	ENSRNOT00000076581	Rfwd2 Links NCBI RGD Ensembl Show fit	ring finger and WD repeat domain 2
chr7_-_143967484 Show fit	0.04	ENSRNOT00000081758	Sp7 Links NCBI RGD Ensembl Show fit	Sp7 transcription factor
chr3_-_94808861 Show fit	0.04	ENSRNOT00000038464	Prrg4 Links NCBI RGD Ensembl Show fit	proline rich and Gla domain 4
chr4_-_77489535 Show fit	0.04	ENSRNOT00000008728	Pdia4 Links NCBI RGD Ensembl Show fit	protein disulfide isomerase family A, member 4
chr15_+_33606124 Show fit	0.04	ENSRNOT00000065210	AC115371.1 Links NCBI RGD Ensembl Show fit
chr4_-_147719072 Show fit	0.04	ENSRNOT00000014493	Rpl32 Links NCBI RGD Ensembl Show fit	ribosomal protein L32
chr4_-_155051429 Show fit	0.04	ENSRNOT00000020094	Klrg1 Links NCBI RGD Ensembl Show fit	killer cell lectin like receptor G1
chr8_-_121973125 Show fit	0.03	ENSRNOT00000012114	Pdcd6ip Links NCBI RGD Ensembl Show fit	programmed cell death 6 interacting protein
chrX_+_110789269 Show fit	0.03	ENSRNOT00000086014	Rnf128 Links NCBI RGD Ensembl Show fit	ring finger protein 128, E3 ubiquitin protein ligase
chr6_-_127319362 Show fit	0.03	ENSRNOT00000012256	Ddx24 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 24
chrX_+_112311251 Show fit	0.03	ENSRNOT00000086698	AABR07040855.1 Links NCBI RGD Ensembl Show fit
chr1_-_102699442 Show fit	0.03	ENSRNOT00000056109	Tph1 Links NCBI RGD Ensembl Show fit	tryptophan hydroxylase 1
chr11_+_64472072 Show fit	0.03	ENSRNOT00000042756	RGD1563835 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27
chrX_-_63291107 Show fit	0.03	ENSRNOT00000092019	Eif2s3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2 subunit gamma
chr18_+_55466373 Show fit	0.03	ENSRNOT00000074629	LOC102555392 Links NCBI RGD Ensembl Show fit	interferon-inducible GTPase 1-like
chr17_-_89163113 Show fit	0.03	ENSRNOT00000050445	LOC100360843 Links NCBI RGD Ensembl Show fit	ribosomal protein S19-like
chr1_+_60884761 Show fit	0.03	ENSRNOT00000088689	LOC100365363 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor, F4-like
chr3_-_165537940 Show fit	0.03	ENSRNOT00000071119 ENSRNOT00000070964	Sall4 Links NCBI RGD Ensembl Show fit	spalt-like transcription factor 4
chr12_+_45026886 Show fit	0.03	ENSRNOT00000001500	Pebp1 Links NCBI RGD Ensembl Show fit	phosphatidylethanolamine binding protein 1
chr5_+_165724027 Show fit	0.03	ENSRNOT00000018000	Casz1 Links NCBI RGD Ensembl Show fit	castor zinc finger 1
chr1_+_88113445 Show fit	0.03	ENSRNOT00000056955	Ggn Links NCBI RGD Ensembl Show fit	gametogenetin
chr1_+_85213652 Show fit	0.03	ENSRNOT00000092044	Nccrp1 Links NCBI RGD Ensembl Show fit	non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
chr6_+_101532518 Show fit	0.03	ENSRNOT00000075054	Gphn Links NCBI RGD Ensembl Show fit	gephyrin
chr3_-_95007712 Show fit	0.03	ENSRNOT00000017409	Eif3m Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 3, subunit M
chr2_-_181900856 Show fit	0.03	ENSRNOT00000082156	Lrat Links NCBI RGD Ensembl Show fit	lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
chr2_+_202200797 Show fit	0.03	ENSRNOT00000042263 ENSRNOT00000071938	Spag17 Links NCBI RGD Ensembl Show fit	sperm associated antigen 17
chr12_+_1460538 Show fit	0.03	ENSRNOT00000001444	Rfc3 Links NCBI RGD Ensembl Show fit	replication factor C subunit 3
chr1_+_23906717 Show fit	0.03	ENSRNOT00000022798	Tcf21 Links NCBI RGD Ensembl Show fit	transcription factor 21
chr18_+_55666027 Show fit	0.03	ENSRNOT00000045950	RGD1305184 Links NCBI RGD Ensembl Show fit	similar to CDNA sequence BC023105
chr9_+_8054466 Show fit	0.03	ENSRNOT00000081513	Adgre4 Links NCBI RGD Ensembl Show fit	adhesion G protein-coupled receptor E4
chr18_-_3676188 Show fit	0.03	ENSRNOT00000073811	Ankrd29 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 29
chr4_-_100252755 Show fit	0.03	ENSRNOT00000017301	Vamp8 Links NCBI RGD Ensembl Show fit	vesicle-associated membrane protein 8
chr2_-_102838745 Show fit	0.03	ENSRNOT00000082084	Cyp7b1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 7, subfamily b, polypeptide 1
chr2_+_54466280 Show fit	0.03	ENSRNOT00000033112	C6 Links NCBI RGD Ensembl Show fit	complement C6
chr1_+_185863043 Show fit	0.03	ENSRNOT00000079072	Sox6 Links NCBI RGD Ensembl Show fit	SRY box 6
chrX_+_74205842 Show fit	0.03	ENSRNOT00000077003	Chic1 Links NCBI RGD Ensembl Show fit	cysteine-rich hydrophobic domain 1
chr4_+_88423412 Show fit	0.03	ENSRNOT00000040163	Vom1r88 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 88
chr10_+_3227160 Show fit	0.03	ENSRNOT00000088075	Ntan1 Links NCBI RGD Ensembl Show fit	N-terminal asparagine amidase
chr10_-_88266210 Show fit	0.03	ENSRNOT00000090702 ENSRNOT00000020603	Hap1 Links NCBI RGD Ensembl Show fit	huntingtin-associated protein 1
chr12_+_46042413 Show fit	0.03	ENSRNOT00000046882	Ccdc60 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 60
chr17_+_15814132 Show fit	0.03	ENSRNOT00000032997	Susd3 Links NCBI RGD Ensembl Show fit	sushi domain containing 3
chr7_-_49741540 Show fit	0.03	ENSRNOT00000006523	Myf6 Links NCBI RGD Ensembl Show fit	myogenic factor 6
chr10_+_31561895 Show fit	0.03	ENSRNOT00000048485	Havcr2 Links NCBI RGD Ensembl Show fit	hepatitis A virus cellular receptor 2
chr6_-_125590049 Show fit	0.03	ENSRNOT00000006371	Tc2n Links NCBI RGD Ensembl Show fit	tandem C2 domains, nuclear
chr10_+_5199226 Show fit	0.03	ENSRNOT00000003544	Dexi Links NCBI RGD Ensembl Show fit	dexamethasone-induced transcript
chrX_-_138118696 Show fit	0.03	ENSRNOT00000084130	Frmd7 Links NCBI RGD Ensembl Show fit	FERM domain containing 7
chr16_-_49453394 Show fit	0.03	ENSRNOT00000041617	Lrp2bp Links NCBI RGD Ensembl Show fit	Lrp2 binding protein
chr1_-_185569190 Show fit	0.03	ENSRNOT00000090773	RGD1311703 Links NCBI RGD Ensembl Show fit	similar to sid2057p
chr4_-_146954159 Show fit	0.03	ENSRNOT00000010397	Tamm41 Links NCBI RGD Ensembl Show fit	TAM41 mitochondrial translocator assembly and maintenance homolog
chr19_+_29320701 Show fit	0.03	ENSRNOT00000049600	Polr2m Links NCBI RGD Ensembl Show fit	polymerase (RNA) II (DNA directed) polypeptide M
chr5_+_10178302 Show fit	0.03	ENSRNOT00000009679	Sntg1 Links NCBI RGD Ensembl Show fit	syntrophin, gamma 1
chr1_-_80271001 Show fit	0.03	ENSRNOT00000034266	Cd3eap Links NCBI RGD Ensembl Show fit	CD3e molecule associated protein
chr16_+_39145230 Show fit	0.03	ENSRNOT00000092942	Adam21 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 21
chr20_-_11721838 Show fit	0.03	ENSRNOT00000001636	Ube2g2 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2G 2
chr5_-_161981441 Show fit	0.03	ENSRNOT00000020316	Pdpn Links NCBI RGD Ensembl Show fit	podoplanin
chr2_+_30685840 Show fit	0.03	ENSRNOT00000031385	Ccdc125 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 125
chr1_-_67065797 Show fit	0.03	ENSRNOT00000048152	Vom1r46 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 46
chr10_-_34961349 Show fit	0.03	ENSRNOT00000004885	LOC103689931 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A/B
chr4_+_8066907 Show fit	0.03	ENSRNOT00000080811	Srpk2 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 2
chr6_+_137323713 Show fit	0.03	ENSRNOT00000029017	Pld4 Links NCBI RGD Ensembl Show fit	phospholipase D family, member 4
chr8_-_107490093 Show fit	0.03	ENSRNOT00000046832	LOC684466 Links NCBI RGD Ensembl Show fit	similar to Fas apoptotic inhibitory molecule 1 (rFAIM)
chr14_-_84334066 Show fit	0.03	ENSRNOT00000006160	Mtfp1 Links NCBI RGD Ensembl Show fit	mitochondrial fission process 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.8	GO:0051970	negative regulation of transmission of nerve impulse(GO:0051970)
0.1	0.3	GO:0051867	general adaptation syndrome, behavioral process(GO:0051867)
0.1	0.2	GO:0014016	neuroblast differentiation(GO:0014016)
0.0	0.1	GO:0052203	modulation of catalytic activity in other organism involved in symbiotic interaction(GO:0052203) modulation by host of symbiont catalytic activity(GO:0052422) regulation of exo-alpha-sialidase activity(GO:1903015)
0.0	0.1	GO:0002434	immune complex clearance(GO:0002434)
0.0	0.1	GO:1901227	negative regulation of transcription from RNA polymerase II promoter involved in heart development(GO:1901227)
0.0	0.2	GO:0016056	rhodopsin mediated signaling pathway(GO:0016056)
0.0	0.1	GO:0016598	protein arginylation(GO:0016598)
0.0	0.1	GO:1904009	cellular response to monosodium glutamate(GO:1904009)
0.0	0.3	GO:2000042	negative regulation of double-strand break repair via homologous recombination(GO:2000042)
0.0	0.1	GO:2000424	regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)
0.0	0.1	GO:0009609	response to symbiotic bacterium(GO:0009609)
0.0	0.1	GO:0061743	motor learning(GO:0061743)
0.0	0.1	GO:0002018	angiotensin maturation(GO:0002003) renin-angiotensin regulation of aldosterone production(GO:0002018)
0.0	0.1	GO:1903334	positive regulation of protein folding(GO:1903334)
0.0	0.1	GO:0035995	detection of muscle stretch(GO:0035995)
0.0	0.1	GO:0045917	positive regulation of complement activation(GO:0045917) positive regulation of protein activation cascade(GO:2000259)
0.0	0.1	GO:1904708	granulosa cell apoptotic process(GO:1904700) regulation of granulosa cell apoptotic process(GO:1904708)
0.0	0.1	GO:0019287	isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0	0.2	GO:0070862	negative regulation of protein exit from endoplasmic reticulum(GO:0070862) negative regulation of retrograde protein transport, ER to cytosol(GO:1904153)
0.0	0.1	GO:0042264	peptidyl-aspartic acid hydroxylation(GO:0042264)
0.0	0.0	GO:0032759	antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) TRAIL production(GO:0032639) regulation of TRAIL production(GO:0032679) positive regulation of TRAIL production(GO:0032759)
0.0	0.0	GO:0031587	positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0031587)
0.0	0.1	GO:0019805	quinolinate biosynthetic process(GO:0019805)
0.0	0.1	GO:1903756	regulation of transcription from RNA polymerase II promoter by histone modification(GO:1903756) negative regulation of transcription from RNA polymerase II promoter by histone modification(GO:1903758)
0.0	0.0	GO:0070173	regulation of enamel mineralization(GO:0070173)
0.0	0.1	GO:0031584	activation of phospholipase D activity(GO:0031584) regulation of protein kinase C activity(GO:1900019) positive regulation of protein kinase C activity(GO:1900020)
0.0	0.0	GO:0044837	assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837)
0.0	0.1	GO:0060005	vestibular reflex(GO:0060005)
0.0	0.0	GO:0046552	eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate commitment(GO:0046552)
0.0	0.0	GO:0014707	branchiomeric skeletal muscle development(GO:0014707)
0.0	0.0	GO:1903595	pancreatic amylase secretion(GO:0036395) regulation of pancreatic amylase secretion(GO:1902276) positive regulation of histamine secretion by mast cell(GO:1903595)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0032280	symmetric synapse(GO:0032280)
0.0	0.1	GO:0044299	C-fiber(GO:0044299)
0.0	0.1	GO:0033185	dolichol-phosphate-mannose synthase complex(GO:0033185)
0.0	0.1	GO:0044307	germinal vesicle(GO:0042585) dendritic branch(GO:0044307)
0.0	0.0	GO:1990836	lysosomal matrix(GO:1990836)
0.0	0.1	GO:1990726	Lsm1-7-Pat1 complex(GO:1990726)
0.0	0.0	GO:0032398	MHC class Ib protein complex(GO:0032398)
0.0	0.1	GO:0097413	Lewy body(GO:0097413)
0.0	0.1	GO:0005750	mitochondrial respiratory chain complex III(GO:0005750)
0.0	0.1	GO:0005787	signal peptidase complex(GO:0005787)
0.0	0.0	GO:0035577	azurophil granule membrane(GO:0035577)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0001515	opioid peptide activity(GO:0001515)
0.0	0.8	GO:0005184	neuropeptide hormone activity(GO:0005184)
0.0	0.1	GO:0031871	proteinase activated receptor binding(GO:0031871)
0.0	0.1	GO:0001849	complement component C1q binding(GO:0001849)
0.0	0.1	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.0	0.1	GO:0004574	oligo-1,6-glucosidase activity(GO:0004574)
0.0	0.1	GO:0008121	ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0	0.1	GO:0031727	CCR2 chemokine receptor binding(GO:0031727)
0.0	0.0	GO:0031686	A1 adenosine receptor binding(GO:0031686)
0.0	0.0	GO:0019136	deoxynucleoside kinase activity(GO:0019136)
0.0	0.1	GO:0032027	myosin light chain binding(GO:0032027)
0.0	0.0	GO:0008396	oxysterol 7-alpha-hydroxylase activity(GO:0008396)
0.0	0.1	GO:0016714	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen(GO:0016714)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME GLYCOPROTEIN HORMONES	Genes involved in Glycoprotein hormones
0.0	0.1	REACTOME DIGESTION OF DIETARY CARBOHYDRATE	Genes involved in Digestion of dietary carbohydrate