GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Dbp Links NCBI RGD Ensembl	ENSRNOG00000021027	D-box binding PAR bZIP transcription factor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Dbp	rn6_v1_chr1_+_101688297_101688297	-0.38	5.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr8_+_40009691 Show fit	0.45	ENSRNOT00000042679	Vsig2 Links NCBI RGD Ensembl Show fit	V-set and immunoglobulin domain containing 2
chr12_-_40822159 Show fit	0.42	ENSRNOT00000001826	Hectd4 Links NCBI RGD Ensembl Show fit	HECT domain E3 ubiquitin protein ligase 4
chr13_-_111948753 Show fit	0.42	ENSRNOT00000048074	Hsd11b1 Links NCBI RGD Ensembl Show fit	hydroxysteroid 11-beta dehydrogenase 1
chr20_-_22459025 Show fit	0.42	ENSRNOT00000000792	Egr2 Links NCBI RGD Ensembl Show fit	early growth response 2
chr9_-_28732919 Show fit	0.41	ENSRNOT00000083915	Rims1 Links NCBI RGD Ensembl Show fit	regulating synaptic membrane exocytosis 1
chr6_+_52631092 Show fit	0.39	ENSRNOT00000014054	Atxn7l1 Links NCBI RGD Ensembl Show fit	ataxin 7-like 1
chr10_-_90240509 Show fit	0.36	ENSRNOT00000028407	Atxn7l3 Links NCBI RGD Ensembl Show fit	ataxin 7-like 3
chr17_+_43632397 Show fit	0.32	ENSRNOT00000013790	Hist1h2ah Links NCBI RGD Ensembl Show fit	histone cluster 1, H2ah
chr7_+_99954492 Show fit	0.30	ENSRNOT00000005885	Trib1 Links NCBI RGD Ensembl Show fit	tribbles pseudokinase 1
chr15_+_51756978 Show fit	0.30	ENSRNOT00000024067	Egr3 Links NCBI RGD Ensembl Show fit	early growth response 3
chr7_+_48867664 Show fit	0.29	ENSRNOT00000005862	Ppfia2 Links NCBI RGD Ensembl Show fit	PTPRF interacting protein alpha 2
chr13_-_109580271 Show fit	0.29	ENSRNOT00000088326	Flvcr1 Links NCBI RGD Ensembl Show fit	feline leukemia virus subgroup C cellular receptor 1
chr1_-_267203986 Show fit	0.28	ENSRNOT00000027574	Sh3pxd2a Links NCBI RGD Ensembl Show fit	SH3 and PX domains 2A
chr12_-_46889082 Show fit	0.28	ENSRNOT00000001525	Pla2g1b Links NCBI RGD Ensembl Show fit	phospholipase A2 group IB
chr11_+_69484293 Show fit	0.28	ENSRNOT00000049292	Kalrn Links NCBI RGD Ensembl Show fit	kalirin, RhoGEF kinase
chr11_-_30051103 Show fit	0.27	ENSRNOT00000046486	Tiam1 Links NCBI RGD Ensembl Show fit	T-cell lymphoma invasion and metastasis 1
chr16_+_74237001 Show fit	0.26	ENSRNOT00000026039	Polb Links NCBI RGD Ensembl Show fit	DNA polymerase beta
chr1_+_198932870 Show fit	0.26	ENSRNOT00000055003	Fbrs Links NCBI RGD Ensembl Show fit	fibrosin
chr9_+_119542328 Show fit	0.25	ENSRNOT00000082005	Lpin2 Links NCBI RGD Ensembl Show fit	lipin 2
chr9_+_14560504 Show fit	0.24	ENSRNOT00000091532	Nfya Links NCBI RGD Ensembl Show fit	nuclear transcription factor Y subunit alpha
chr10_-_61744976 Show fit	0.23	ENSRNOT00000079926 ENSRNOT00000092314 ENSRNOT00000034298	Sgsm2 Links NCBI RGD Ensembl Show fit	small G protein signaling modulator 2
chr11_+_57430166 Show fit	0.22	ENSRNOT00000093201	Phldb2 Links NCBI RGD Ensembl Show fit	pleckstrin homology-like domain, family B, member 2
chr3_-_158328881 Show fit	0.22	ENSRNOT00000044466	Ptprt Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, T
chr6_+_126874193 Show fit	0.22	ENSRNOT00000011775	Unc79 Links NCBI RGD Ensembl Show fit	unc-79 homolog (C. elegans)
chr2_-_173087648 Show fit	0.22	ENSRNOT00000091079	Iqcj Links NCBI RGD Ensembl Show fit	IQ motif containing J
chr3_+_80676820 Show fit	0.21	ENSRNOT00000084809	Ambra1 Links NCBI RGD Ensembl Show fit	autophagy and beclin 1 regulator 1
chr18_+_30864216 Show fit	0.21	ENSRNOT00000027015	Pcdhga7 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily A, 7
chr18_-_32670665 Show fit	0.20	ENSRNOT00000019409	Nr3c1 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 3, group C, member 1
chr14_+_63095720 Show fit	0.19	ENSRNOT00000006071	Ppargc1a Links NCBI RGD Ensembl Show fit	PPARG coactivator 1 alpha
chr3_+_175426752 Show fit	0.19	ENSRNOT00000085718	Ss18l1 Links NCBI RGD Ensembl Show fit	SS18L1, nBAF chromatin remodeling complex subunit
chr7_+_23403891 Show fit	0.18	ENSRNOT00000037918	Syn3 Links NCBI RGD Ensembl Show fit	synapsin III
chr5_+_43603043 Show fit	0.18	ENSRNOT00000009899	Epha7 Links NCBI RGD Ensembl Show fit	Eph receptor A7
chr8_-_39551700 Show fit	0.18	ENSRNOT00000091894 ENSRNOT00000076025	Pknox2 Links NCBI RGD Ensembl Show fit	PBX/knotted 1 homeobox 2
chr3_-_120087136 Show fit	0.17	ENSRNOT00000078994	Kcnip3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 3
chr10_+_74959285 Show fit	0.17	ENSRNOT00000010296	Rnf43 Links NCBI RGD Ensembl Show fit	ring finger protein 43
chr7_+_41475163 Show fit	0.17	ENSRNOT00000037844	Dusp6 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 6
chr9_-_52238564 Show fit	0.17	ENSRNOT00000005073	Col5a2 Links NCBI RGD Ensembl Show fit	collagen type V alpha 2 chain
chr1_+_190671696 Show fit	0.17	ENSRNOT00000084934	AABR07005633.1 Links NCBI RGD Ensembl Show fit
chr4_+_168599331 Show fit	0.16	ENSRNOT00000086719	Crebl2 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein-like 2
chr7_+_3216497 Show fit	0.16	ENSRNOT00000008909	Mmp19 Links NCBI RGD Ensembl Show fit	matrix metallopeptidase 19
chr18_-_18079560 Show fit	0.16	ENSRNOT00000072093	AABR07031533.1 Links NCBI RGD Ensembl Show fit
chr3_-_120076788 Show fit	0.16	ENSRNOT00000047158	Kcnip3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 3
chr14_-_84751886 Show fit	0.16	ENSRNOT00000078838	Mtmr3 Links NCBI RGD Ensembl Show fit	myotubularin related protein 3
chr20_+_25990656 Show fit	0.15	ENSRNOT00000081254	Lrrtm3 Links NCBI RGD Ensembl Show fit	leucine rich repeat transmembrane neuronal 3
chr14_+_39663421 Show fit	0.15	ENSRNOT00000003197	Gabra2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor alpha2 subunit
chr10_-_31359699 Show fit	0.15	ENSRNOT00000081280	Cyfip2 Links NCBI RGD Ensembl Show fit	cytoplasmic FMR1 interacting protein 2
chr7_+_80750725 Show fit	0.15	ENSRNOT00000079962	Oxr1 Links NCBI RGD Ensembl Show fit	oxidation resistance 1
chr17_-_89881919 Show fit	0.15	ENSRNOT00000090982	LOC100910957 Links NCBI RGD Ensembl Show fit	acyl-CoA-binding domain-containing protein 5-like
chr4_+_113935492 Show fit	0.14	ENSRNOT00000035329	LOC103692170 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 142
chr14_+_17531398 Show fit	0.14	ENSRNOT00000050038	Cdkl2 Links NCBI RGD Ensembl Show fit	cyclin dependent kinase like 2
chr6_-_135939534 Show fit	0.13	ENSRNOT00000052237	Diras3 Links NCBI RGD Ensembl Show fit	DIRAS family GTPase 3
chr2_+_66940057 Show fit	0.13	ENSRNOT00000043050	Cdh9 Links NCBI RGD Ensembl Show fit	cadherin 9
chr13_+_34483876 Show fit	0.13	ENSRNOT00000092998	Clasp1 Links NCBI RGD Ensembl Show fit	cytoplasmic linker associated protein 1
chr2_-_49128501 Show fit	0.13	ENSRNOT00000073847	Parp8 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 8
chr7_-_114573900 Show fit	0.13	ENSRNOT00000011219	Ptk2 Links NCBI RGD Ensembl Show fit	protein tyrosine kinase 2
chr14_+_84876781 Show fit	0.13	ENSRNOT00000065188	Ascc2 Links NCBI RGD Ensembl Show fit	activating signal cointegrator 1 complex subunit 2
chr2_-_210454737 Show fit	0.13	ENSRNOT00000079993	Ahcyl1 Links NCBI RGD Ensembl Show fit	adenosylhomocysteinase-like 1
chr14_-_114692764 Show fit	0.12	ENSRNOT00000008210	Sptbn1 Links NCBI RGD Ensembl Show fit	spectrin, beta, non-erythrocytic 1
chr3_+_43255567 Show fit	0.12	ENSRNOT00000044419	Gpd2 Links NCBI RGD Ensembl Show fit	glycerol-3-phosphate dehydrogenase 2
chr5_+_119727839 Show fit	0.12	ENSRNOT00000014354	Cachd1 Links NCBI RGD Ensembl Show fit	cache domain containing 1
chr11_+_42259761 Show fit	0.12	ENSRNOT00000047310	Epha6 Links NCBI RGD Ensembl Show fit	Eph receptor A6
chr3_+_116899878 Show fit	0.12	ENSRNOT00000090802 ENSRNOT00000066101	Sema6d Links NCBI RGD Ensembl Show fit	semaphorin 6D
chr7_-_123767797 Show fit	0.11	ENSRNOT00000012699	Tcf20 Links NCBI RGD Ensembl Show fit	transcription factor 20
chr7_-_143966863 Show fit	0.11	ENSRNOT00000018828	Sp7 Links NCBI RGD Ensembl Show fit	Sp7 transcription factor
chr2_-_188645196 Show fit	0.11	ENSRNOT00000083793	Efna3 Links NCBI RGD Ensembl Show fit	ephrin A3
chr5_+_139394794 Show fit	0.11	ENSRNOT00000045954	Scmh1 Links NCBI RGD Ensembl Show fit	sex comb on midleg homolog 1 (Drosophila)
chr3_+_8537350 Show fit	0.11	ENSRNOT00000079640	Sptan1 Links NCBI RGD Ensembl Show fit	spectrin, alpha, non-erythrocytic 1
chrX_+_39711201 Show fit	0.11	ENSRNOT00000080512 ENSRNOT00000009802	Cnksr2 Links NCBI RGD Ensembl Show fit	connector enhancer of kinase suppressor of Ras 2
chr15_-_33250546 Show fit	0.11	ENSRNOT00000017857	RGD1565222 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4931414P19
chr15_-_77736892 Show fit	0.10	ENSRNOT00000057924	Pcdh9 Links NCBI RGD Ensembl Show fit	protocadherin 9
chr4_-_68819872 Show fit	0.10	ENSRNOT00000033265 ENSRNOT00000081884	Clec5a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 5, member A
chr17_+_35435079 Show fit	0.10	ENSRNOT00000074800	Exoc2 Links NCBI RGD Ensembl Show fit	exocyst complex component 2
chr2_-_196526886 Show fit	0.10	ENSRNOT00000077325	Setdb1 Links NCBI RGD Ensembl Show fit	SET domain, bifurcated 1
chr17_-_9952898 Show fit	0.10	ENSRNOT00000060928	Nsd1 Links NCBI RGD Ensembl Show fit	nuclear receptor binding SET domain protein 1
chr2_-_118989127 Show fit	0.10	ENSRNOT00000014871	Gnb4 Links NCBI RGD Ensembl Show fit	G protein subunit beta 4
chr4_+_77554269 Show fit	0.09	ENSRNOT00000037248	Zfp282 Links NCBI RGD Ensembl Show fit	zinc finger protein 282
chr4_+_157513414 Show fit	0.09	ENSRNOT00000078769	Pianp Links NCBI RGD Ensembl Show fit	PILR alpha associated neural protein
chr8_-_120446455 Show fit	0.09	ENSRNOT00000085161 ENSRNOT00000042854 ENSRNOT00000037199	Arpp21 Links NCBI RGD Ensembl Show fit	cAMP regulated phosphoprotein 21
chr15_+_23792931 Show fit	0.09	ENSRNOT00000092091	Samd4a Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 4A
chr16_+_11032531 Show fit	0.09	ENSRNOT00000078390	Wapl Links NCBI RGD Ensembl Show fit	WAPL cohesin release factor
chr1_-_89042176 Show fit	0.09	ENSRNOT00000080842	Kmt2b Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2B
chr2_+_50099576 Show fit	0.09	ENSRNOT00000089218	Hcn1 Links NCBI RGD Ensembl Show fit	hyperpolarization-activated cyclic nucleotide-gated potassium channel 1
chr4_+_123307624 Show fit	0.09	ENSRNOT00000085466	Iqsec1 Links NCBI RGD Ensembl Show fit	IQ motif and Sec7 domain 1
chr15_+_102164751 Show fit	0.09	ENSRNOT00000076400	Gpc6 Links NCBI RGD Ensembl Show fit	glypican 6
chr7_-_2972521 Show fit	0.09	ENSRNOT00000061995	Zc3h10 Links NCBI RGD Ensembl Show fit	zinc finger CCCH type containing 10
chr18_+_30581530 Show fit	0.09	ENSRNOT00000048166	Pcdhb20 Links NCBI RGD Ensembl Show fit	protocadherin beta 20
chr10_+_19366793 Show fit	0.08	ENSRNOT00000050610	Fam196b Links NCBI RGD Ensembl Show fit	family with sequence similarity 196, member B
chrX_+_62727755 Show fit	0.08	ENSRNOT00000077055	Pcyt1b Links NCBI RGD Ensembl Show fit	phosphate cytidylyltransferase 1, choline, beta
chr6_+_12362813 Show fit	0.08	ENSRNOT00000022370	Ston1 Links NCBI RGD Ensembl Show fit	stonin 1
chr1_-_72311856 Show fit	0.07	ENSRNOT00000021286	Epn1 Links NCBI RGD Ensembl Show fit	Epsin 1
chr3_-_150064438 Show fit	0.07	ENSRNOT00000086933	E2f1 Links NCBI RGD Ensembl Show fit	E2F transcription factor 1
chr10_-_1461216 Show fit	0.07	ENSRNOT00000083125 ENSRNOT00000084447 ENSRNOT00000078421	Parn Links NCBI RGD Ensembl Show fit	poly(A)-specific ribonuclease
chr10_+_56512615 Show fit	0.07	ENSRNOT00000021883	Neurl4 Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 4
chr2_+_104744461 Show fit	0.07	ENSRNOT00000016083 ENSRNOT00000082627	Cp Links NCBI RGD Ensembl Show fit	ceruloplasmin
chr6_+_93461713 Show fit	0.07	ENSRNOT00000031595	Arid4a Links NCBI RGD Ensembl Show fit	AT-rich interaction domain 4A
chr15_+_344685 Show fit	0.07	ENSRNOT00000065542 ENSRNOT00000066928	Kcnma1 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily M alpha 1
chr15_+_96821832 Show fit	0.07	ENSRNOT00000012785	Slitrk5 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 5
chr2_-_189818224 Show fit	0.07	ENSRNOT00000020575	Ints3 Links NCBI RGD Ensembl Show fit	integrator complex subunit 3
chr3_+_95707386 Show fit	0.07	ENSRNOT00000005882	Pax6 Links NCBI RGD Ensembl Show fit	paired box 6
chr15_-_93307420 Show fit	0.07	ENSRNOT00000012195	Slitrk1 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 1
chr1_+_266844480 Show fit	0.07	ENSRNOT00000027482	Taf5 Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 5
chr2_+_102685513 Show fit	0.06	ENSRNOT00000033940	Bhlhe22 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e22
chr11_-_66807694 Show fit	0.06	ENSRNOT00000083152	Golgb1 Links NCBI RGD Ensembl Show fit	golgin B1
chr10_+_34489940 Show fit	0.06	ENSRNOT00000085975	Zfp62 Links NCBI RGD Ensembl Show fit	zinc finger protein 62
chrX_+_15988604 Show fit	0.06	ENSRNOT00000003800	Usp27x Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 27, X-linked
chr1_-_134870255 Show fit	0.06	ENSRNOT00000055829	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chr7_+_18440742 Show fit	0.06	ENSRNOT00000011513	Myo1f Links NCBI RGD Ensembl Show fit	myosin IF
chr8_-_122311431 Show fit	0.06	ENSRNOT00000033126	Fbxl2 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 2
chr12_+_7081895 Show fit	0.06	ENSRNOT00000047163	Hmgb1 Links NCBI RGD Ensembl Show fit	high mobility group box 1
chr4_+_81311490 Show fit	0.06	ENSRNOT00000016265	Snx10 Links NCBI RGD Ensembl Show fit	sorting nexin 10
chr10_-_110182291 Show fit	0.06	ENSRNOT00000015178 ENSRNOT00000054936	Csnk1d Links NCBI RGD Ensembl Show fit	casein kinase 1, delta
chr10_+_65767930 Show fit	0.05	ENSRNOT00000039954	Vtn Links NCBI RGD Ensembl Show fit	vitronectin
chr8_-_96203677 Show fit	0.05	ENSRNOT00000074515	Syncrip Links NCBI RGD Ensembl Show fit	synaptotagmin binding, cytoplasmic RNA interacting protein
chr19_+_37252843 Show fit	0.05	ENSRNOT00000021145	E2f4 Links NCBI RGD Ensembl Show fit	E2F transcription factor 4
chr4_-_42188289 Show fit	0.05	ENSRNOT00000081688	Rbmxl1b Links NCBI RGD Ensembl Show fit	RNA binding motif protein, X-linked-like 1B
chr6_+_48452369 Show fit	0.05	ENSRNOT00000044310	Myt1l Links NCBI RGD Ensembl Show fit	myelin transcription factor 1-like
chr16_+_83824430 Show fit	0.05	ENSRNOT00000032918	Irs2 Links NCBI RGD Ensembl Show fit	insulin receptor substrate 2
chr1_-_188895223 Show fit	0.05	ENSRNOT00000032796	Gpr139 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 139
chr2_+_41467064 Show fit	0.05	ENSRNOT00000073231	AABR07008066.2 Links NCBI RGD Ensembl Show fit
chr12_-_5822874 Show fit	0.05	ENSRNOT00000075920	Fry Links NCBI RGD Ensembl Show fit	FRY microtubule binding protein
chr18_-_29015552 Show fit	0.05	ENSRNOT00000028713	Nrg2 Links NCBI RGD Ensembl Show fit	neuregulin 2
chr2_+_41442241 Show fit	0.05	ENSRNOT00000067546	Pde4d Links NCBI RGD Ensembl Show fit	phosphodiesterase 4D
chr14_+_34455934 Show fit	0.05	ENSRNOT00000085991 ENSRNOT00000002981	Clock Links NCBI RGD Ensembl Show fit	clock circadian regulator
chr8_+_117282390 Show fit	0.05	ENSRNOT00000074772	Usp19 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 19
chr2_-_63166509 Show fit	0.05	ENSRNOT00000018246	Cdh6 Links NCBI RGD Ensembl Show fit	cadherin 6
chr8_+_44990014 Show fit	0.05	ENSRNOT00000044608	Hspa8 Links NCBI RGD Ensembl Show fit	heat shock protein family A (Hsp70) member 8
chr15_+_4240203 Show fit	0.05	ENSRNOT00000010178	Mss51 Links NCBI RGD Ensembl Show fit	MSS51 mitochondrial translational activator
chr8_+_4440876 Show fit	0.05	ENSRNOT00000049325 ENSRNOT00000076529 ENSRNOT00000076748	Pdgfd Links NCBI RGD Ensembl Show fit	platelet derived growth factor D
chr9_-_15582556 Show fit	0.05	ENSRNOT00000020516	RGD1561662 Links NCBI RGD Ensembl Show fit	similar to AI661453 protein
chr5_+_154489590 Show fit	0.05	ENSRNOT00000035788	Id3 Links NCBI RGD Ensembl Show fit	inhibitor of DNA binding 3, HLH protein
chr2_+_34546988 Show fit	0.05	ENSRNOT00000072577	Adamts6 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 6
chr4_-_176922424 Show fit	0.05	ENSRNOT00000055540	Abcc9 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily C member 9
chr7_-_68549763 Show fit	0.05	ENSRNOT00000078014	Slc16a7 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 7
chr10_+_77762900 Show fit	0.05	ENSRNOT00000003308	Mmd Links NCBI RGD Ensembl Show fit	monocyte to macrophage differentiation-associated
chr2_-_140334912 Show fit	0.05	ENSRNOT00000015067	Elf2 Links NCBI RGD Ensembl Show fit	E74-like factor 2
chr10_+_95770154 Show fit	0.04	ENSRNOT00000030300	Helz Links NCBI RGD Ensembl Show fit	helicase with zinc finger
chr2_+_58462949 Show fit	0.04	ENSRNOT00000080618	Nadk2 Links NCBI RGD Ensembl Show fit	NAD kinase 2, mitochondrial
chr9_+_3896337 Show fit	0.04	ENSRNOT00000079166	LOC103693189 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase type IVA 1
chr6_-_117972898 Show fit	0.04	ENSRNOT00000032968	AABR07065265.1 Links NCBI RGD Ensembl Show fit
chr9_+_100104000 Show fit	0.04	ENSRNOT00000074160	Capn10 Links NCBI RGD Ensembl Show fit	calpain 10
chr13_-_67926222 Show fit	0.04	ENSRNOT00000076697	Hmcn1 Links NCBI RGD Ensembl Show fit	hemicentin 1
chr2_-_196527127 Show fit	0.04	ENSRNOT00000028709	Setdb1 Links NCBI RGD Ensembl Show fit	SET domain, bifurcated 1
chr9_+_18564927 Show fit	0.04	ENSRNOT00000061014	Runx2 Links NCBI RGD Ensembl Show fit	runt-related transcription factor 2
chr6_+_22696397 Show fit	0.04	ENSRNOT00000011630	Alk Links NCBI RGD Ensembl Show fit	anaplastic lymphoma receptor tyrosine kinase
chr1_+_260798239 Show fit	0.04	ENSRNOT00000036791	Lcor Links NCBI RGD Ensembl Show fit	ligand dependent nuclear receptor corepressor
chrX_+_32745873 Show fit	0.04	ENSRNOT00000005559	Grpr Links NCBI RGD Ensembl Show fit	gastrin releasing peptide receptor
chr11_-_83867203 Show fit	0.04	ENSRNOT00000002394	Chrd Links NCBI RGD Ensembl Show fit	chordin
chr15_+_33074441 Show fit	0.04	ENSRNOT00000075610	Mmp14 Links NCBI RGD Ensembl Show fit	matrix metallopeptidase 14
chr5_-_146787676 Show fit	0.04	ENSRNOT00000008887	Zscan20 Links NCBI RGD Ensembl Show fit	zinc finger and SCAN domain containing 20
chr20_+_7330250 Show fit	0.04	ENSRNOT00000090993	LOC499407 Links NCBI RGD Ensembl Show fit	LRRGT00097
chr7_-_24667301 Show fit	0.03	ENSRNOT00000009154	Tmem263 Links NCBI RGD Ensembl Show fit	transmembrane protein 263
chr11_+_57108956 Show fit	0.03	ENSRNOT00000035485	Cd96 Links NCBI RGD Ensembl Show fit	CD96 molecule
chr9_-_119190698 Show fit	0.03	ENSRNOT00000021534	Tgif1 Links NCBI RGD Ensembl Show fit	TGFB-induced factor homeobox 1
chr3_+_160231914 Show fit	0.03	ENSRNOT00000014411	Kcnk15 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 15
chr19_-_43528851 Show fit	0.03	ENSRNOT00000036972	Mlkl Links NCBI RGD Ensembl Show fit	mixed lineage kinase domain like pseudokinase
chrX_+_112270986 Show fit	0.03	ENSRNOT00000091441 ENSRNOT00000082652	Vsig1 Links NCBI RGD Ensembl Show fit	V-set and immunoglobulin domain containing 1
chr20_+_25990304 Show fit	0.03	ENSRNOT00000033980	Lrrtm3 Links NCBI RGD Ensembl Show fit	leucine rich repeat transmembrane neuronal 3
chr5_+_60850852 Show fit	0.03	ENSRNOT00000016720	Trmt10b Links NCBI RGD Ensembl Show fit	tRNA methyltransferase 10B
chr12_-_38274036 Show fit	0.03	ENSRNOT00000063990	Kntc1 Links NCBI RGD Ensembl Show fit	kinetochore associated 1
chrX_+_84064427 Show fit	0.03	ENSRNOT00000046364	Zfp711 Links NCBI RGD Ensembl Show fit	zinc finger protein 711
chr16_-_6405117 Show fit	0.03	ENSRNOT00000047737	Cacna1d Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 D
chr2_-_29121104 Show fit	0.03	ENSRNOT00000020543	Tnpo1 Links NCBI RGD Ensembl Show fit	transportin 1
chr14_+_2050483 Show fit	0.02	ENSRNOT00000000047	Slc26a1 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 1
chr13_-_51201331 Show fit	0.02	ENSRNOT00000005272 ENSRNOT00000078990	Tmem183a Links NCBI RGD Ensembl Show fit	transmembrane protein 183A
chr19_+_9895121 Show fit	0.02	ENSRNOT00000033953	Prss54 Links NCBI RGD Ensembl Show fit	protease, serine, 54
chr4_-_180505916 Show fit	0.02	ENSRNOT00000086465	AABR07062512.1 Links NCBI RGD Ensembl Show fit
chr7_+_60099120 Show fit	0.02	ENSRNOT00000007338	LOC100911101 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing protein 10-like
chr1_+_23409408 Show fit	0.02	ENSRNOT00000022362	Eya4 Links NCBI RGD Ensembl Show fit	EYA transcriptional coactivator and phosphatase 4
chr1_+_265157379 Show fit	0.02	ENSRNOT00000022426	Btrc Links NCBI RGD Ensembl Show fit	beta-transducin repeat containing E3 ubiquitin protein ligase
chr16_-_6404578 Show fit	0.02	ENSRNOT00000051371	Cacna1d Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 D
chr7_+_12820840 Show fit	0.02	ENSRNOT00000012317	Rnf126 Links NCBI RGD Ensembl Show fit	ring finger protein 126
chr2_+_54191538 Show fit	0.01	ENSRNOT00000019524	Plcxd3 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-specific phospholipase C, X domain containing 3
chr5_-_12526962 Show fit	0.01	ENSRNOT00000092104	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr13_-_1946508 Show fit	0.01	ENSRNOT00000043890	Dsel Links NCBI RGD Ensembl Show fit	dermatan sulfate epimerase-like
chr4_+_102426224 Show fit	0.01	ENSRNOT00000073768	LOC103694107 Links NCBI RGD Ensembl Show fit	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 pseudogene
chr7_+_60087429 Show fit	0.01	ENSRNOT00000073117	Lrrc10 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing 10
chr3_+_8643936 Show fit	0.01	ENSRNOT00000077797	Set Links NCBI RGD Ensembl Show fit	SET nuclear proto-oncogene
chr13_+_60619309 Show fit	0.01	ENSRNOT00000082129	AABR07021204.1 Links NCBI RGD Ensembl Show fit
chr17_-_80807181 Show fit	0.01	ENSRNOT00000040052 ENSRNOT00000090064	Cubn Links NCBI RGD Ensembl Show fit	cubilin
chr8_+_87211819 Show fit	0.01	ENSRNOT00000086093	LOC100363289 Links NCBI RGD Ensembl Show fit	LRRGT00022-like
chr17_+_34704616 Show fit	0.01	ENSRNOT00000090706 ENSRNOT00000083674 ENSRNOT00000077110	Exoc2 Links NCBI RGD Ensembl Show fit	exocyst complex component 2
chr16_+_71787966 Show fit	0.01	ENSRNOT00000080084	Htra4 Links NCBI RGD Ensembl Show fit	HtrA serine peptidase 4
chr5_-_117612123 Show fit	0.01	ENSRNOT00000065112	Dock7 Links NCBI RGD Ensembl Show fit	dedicator of cytokinesis 7
chr5_-_150506871 Show fit	0.01	ENSRNOT00000086131	Trnau1ap Links NCBI RGD Ensembl Show fit	tRNA selenocysteine 1 associated protein 1
chr2_-_154542557 Show fit	0.01	ENSRNOT00000013392	Slc33a1 Links NCBI RGD Ensembl Show fit	solute carrier family 33 member 1
chr6_+_137997335 Show fit	0.01	ENSRNOT00000006872	Tmem121 Links NCBI RGD Ensembl Show fit	transmembrane protein 121
chr2_-_188736462 Show fit	0.01	ENSRNOT00000028030	Flad1 Links NCBI RGD Ensembl Show fit	flavin adenine dinucleotide synthetase 1
chr15_-_60743064 Show fit	0.01	ENSRNOT00000013333	Akap11 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 11
chr20_-_27757149 Show fit	0.01	ENSRNOT00000088287	Dse Links NCBI RGD Ensembl Show fit	dermatan sulfate epimerase
chr15_+_47373120 Show fit	0.01	ENSRNOT00000070815	Rp1l1 Links NCBI RGD Ensembl Show fit	RP1 like 1
chr18_+_61258911 Show fit	0.00	ENSRNOT00000082403	Zfp532 Links NCBI RGD Ensembl Show fit	zinc finger protein 532
chr19_+_46733633 Show fit	0.00	ENSRNOT00000016307	Clec3a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 3, member A
chr16_+_69089955 Show fit	0.00	ENSRNOT00000017324	Brf2 Links NCBI RGD Ensembl Show fit	BRF2, RNA polymerase III transcription initiation factor 50 subunit
chr1_-_7443863 Show fit	0.00	ENSRNOT00000088558	Phactr2 Links NCBI RGD Ensembl Show fit	phosphatase and actin regulator 2
chr17_-_27969433 Show fit	0.00	ENSRNOT00000073967	Nrn1 Links NCBI RGD Ensembl Show fit	neuritin 1
chr18_+_61261418 Show fit	0.00	ENSRNOT00000064250	Zfp532 Links NCBI RGD Ensembl Show fit	zinc finger protein 532
chr1_-_82610350 Show fit	0.00	ENSRNOT00000028177	Cyp2s1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 2, subfamily s, polypeptide 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0006713	glucocorticoid catabolic process(GO:0006713)
0.1	0.4	GO:0031632	positive regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031632)
0.1	0.5	GO:0021593	rhombomere morphogenesis(GO:0021593)
0.1	0.5	GO:0098989	NMDA selective glutamate receptor signaling pathway(GO:0098989)
0.1	0.2	GO:0034499	late endosome to Golgi transport(GO:0034499)
0.1	0.3	GO:0045658	regulation of neutrophil differentiation(GO:0045658)
0.1	0.2	GO:0071250	cellular response to nitrite(GO:0071250) response to nitrite(GO:0080033) response to resveratrol(GO:1904638) regulation of progesterone biosynthetic process(GO:2000182)
0.1	0.3	GO:0051964	negative regulation of synapse assembly(GO:0051964)
0.1	0.2	GO:1900170	negative regulation of glucocorticoid mediated signaling pathway(GO:1900170)
0.0	0.3	GO:0072675	osteoclast fusion(GO:0072675)
0.0	0.3	GO:0006287	base-excision repair, gap-filling(GO:0006287)
0.0	0.3	GO:1903224	regulation of endodermal cell differentiation(GO:1903224)
0.0	0.4	GO:1903690	negative regulation of wound healing, spreading of epidermal cells(GO:1903690)
0.0	0.1	GO:0090309	positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.0	0.3	GO:0015886	heme transport(GO:0015886)
0.0	0.1	GO:0071921	establishment of sister chromatid cohesion(GO:0034085) cohesin loading(GO:0071921) regulation of cohesin loading(GO:0071922)
0.0	0.1	GO:0000414	regulation of histone H3-K36 methylation(GO:0000414)
0.0	0.1	GO:0019563	glycerol catabolic process(GO:0019563)
0.0	0.1	GO:0060082	eye blink reflex(GO:0060082)
0.0	0.1	GO:1902630	regulation of membrane hyperpolarization(GO:1902630)
0.0	0.3	GO:0046643	positive regulation of T cell differentiation in thymus(GO:0033089) regulation of gamma-delta T cell differentiation(GO:0045586) regulation of gamma-delta T cell activation(GO:0046643) positive regulation of thymocyte aggregation(GO:2000400)
0.0	0.1	GO:0035711	T cell mediated immune response to tumor cell(GO:0002424) regulation of T cell mediated immune response to tumor cell(GO:0002840) negative regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0017055) regulation of mismatch repair(GO:0032423) positive regulation of toll-like receptor 9 signaling pathway(GO:0034165) T-helper 1 cell activation(GO:0035711) positive regulation of glycogen catabolic process(GO:0045819) negative regulation of apoptotic cell clearance(GO:2000426)
0.0	0.2	GO:0051388	positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
0.0	0.1	GO:0071930	negative regulation of transcription involved in G1/S transition of mitotic cell cycle(GO:0071930)
0.0	0.1	GO:0033353	S-adenosylmethionine cycle(GO:0033353)
0.0	0.3	GO:0002227	innate immune response in mucosa(GO:0002227)
0.0	0.1	GO:0086024	adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
0.0	0.4	GO:0016578	histone deubiquitination(GO:0016578)
0.0	0.0	GO:0061740	protein targeting to lysosome involved in chaperone-mediated autophagy(GO:0061740) regulation of lysosomal membrane permeability(GO:0097213) positive regulation of lysosomal membrane permeability(GO:0097214)
0.0	0.0	GO:0035696	monocyte extravasation(GO:0035696)
0.0	0.2	GO:1902993	positive regulation of beta-amyloid formation(GO:1902004) positive regulation of amyloid precursor protein catabolic process(GO:1902993)
0.0	0.1	GO:1902083	negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083)
0.0	0.2	GO:0001554	luteolysis(GO:0001554)
0.0	0.1	GO:0001927	exocyst assembly(GO:0001927) entry of bacterium into host cell(GO:0035635) regulation of entry of bacterium into host cell(GO:2000535)
0.0	0.0	GO:0090648	response to environmental enrichment(GO:0090648)
0.0	0.1	GO:0010748	negative regulation of plasma membrane long-chain fatty acid transport(GO:0010748)
0.0	0.0	GO:0031989	bombesin receptor signaling pathway(GO:0031989)
0.0	0.1	GO:1904428	negative regulation of tubulin deacetylation(GO:1904428)
0.0	0.3	GO:0048266	behavioral response to pain(GO:0048266)
0.0	0.1	GO:1900042	positive regulation of interleukin-2 secretion(GO:1900042)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0098831	presynaptic active zone cytoplasmic component(GO:0098831)
0.0	0.2	GO:0005588	collagen type V trimer(GO:0005588)
0.0	0.2	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.0	0.1	GO:0031592	centrosomal corona(GO:0031592)
0.0	0.1	GO:0098855	HCN channel complex(GO:0098855)
0.0	0.4	GO:0000124	SAGA complex(GO:0000124)
0.0	0.2	GO:0032437	cuticular plate(GO:0032437)
0.0	0.1	GO:0009331	glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0	0.3	GO:0060091	kinocilium(GO:0060091)
0.0	0.2	GO:0045180	basal cortex(GO:0045180)
0.0	0.1	GO:0098888	extrinsic component of presynaptic membrane(GO:0098888)
0.0	0.1	GO:0070876	SOSS complex(GO:0070876)
0.0	0.0	GO:1990836	lysosomal matrix(GO:1990836)
0.0	0.2	GO:0071565	nBAF complex(GO:0071565)
0.0	0.1	GO:0035189	Rb-E2F complex(GO:0035189)
0.0	0.0	GO:0008282	ATP-sensitive potassium channel complex(GO:0008282)
0.0	0.1	GO:0005726	perichromatin fibrils(GO:0005726)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0003845	11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
0.0	0.1	GO:0052590	sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity(GO:0052590) sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity(GO:0052591)
0.0	0.1	GO:0042799	histone methyltransferase activity (H4-K20 specific)(GO:0042799)
0.0	0.3	GO:0015232	heme transporter activity(GO:0015232)
0.0	0.1	GO:0016802	adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0	0.2	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0	0.3	GO:0047498	calcium-dependent phospholipase A2 activity(GO:0047498)
0.0	0.2	GO:0008503	benzodiazepine receptor activity(GO:0008503)
0.0	0.3	GO:0016176	superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0	0.5	GO:0030676	Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0	0.2	GO:0005004	GPI-linked ephrin receptor activity(GO:0005004)
0.0	0.2	GO:1990239	steroid hormone binding(GO:1990239)
0.0	0.5	GO:0071837	HMG box domain binding(GO:0071837)
0.0	0.2	GO:0045294	alpha-catenin binding(GO:0045294) delta-catenin binding(GO:0070097)
0.0	0.1	GO:0060072	large conductance calcium-activated potassium channel activity(GO:0060072)
0.0	0.1	GO:0004105	choline-phosphate cytidylyltransferase activity(GO:0004105)
0.0	0.0	GO:0008281	sulfonylurea receptor activity(GO:0008281)
0.0	0.3	GO:0055106	ubiquitin-protein transferase regulator activity(GO:0055106)
0.0	0.3	GO:0008195	phosphatidate phosphatase activity(GO:0008195)
0.0	0.1	GO:0043515	kinetochore binding(GO:0043515)
0.0	0.0	GO:0004946	bombesin receptor activity(GO:0004946)
0.0	0.1	GO:0005006	epidermal growth factor-activated receptor activity(GO:0005006)
0.0	0.0	GO:0031686	A1 adenosine receptor binding(GO:0031686)
0.0	0.4	GO:1990841	promoter-specific chromatin binding(GO:1990841)
0.0	0.1	GO:0004322	ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0	0.1	GO:0005003	ephrin receptor activity(GO:0005003)
0.0	0.2	GO:0017017	MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0	0.1	GO:0010858	calcium-dependent protein kinase regulator activity(GO:0010858)
0.0	0.1	GO:1990380	Lys48-specific deubiquitinase activity(GO:1990380)
0.0	0.1	GO:0008432	JUN kinase binding(GO:0008432)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	PID ARF6 DOWNSTREAM PATHWAY	Arf6 downstream pathway
0.0	0.7	ST DIFFERENTIATION PATHWAY IN PC12 CELLS	Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.
0.0	0.4	PID EPHA FWDPATHWAY	EPHA forward signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE	Genes involved in Dopamine Neurotransmitter Release Cycle
0.0	0.2	REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA	Genes involved in Activation of Chaperone Genes by ATF6-alpha
0.0	0.3	REACTOME BASE FREE SUGAR PHOSPHATE REMOVAL VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY	Genes involved in Base-free sugar-phosphate removal via the single-nucleotide replacement pathway
0.0	0.3	REACTOME ACYL CHAIN REMODELLING OF PI	Genes involved in Acyl chain remodelling of PI
0.0	0.3	REACTOME SYNTHESIS OF PE	Genes involved in Synthesis of PE
0.0	0.4	REACTOME STEROID HORMONES	Genes involved in Steroid hormones
0.0	0.2	REACTOME ERKS ARE INACTIVATED	Genes involved in ERKs are inactivated
0.0	0.4	REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION	Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression