GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Dlx1 Links NCBI RGD Ensembl	ENSRNOG00000001520	distal-less homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Dlx1	rn6_v1_chr3_+_58164931_58164931	-0.65	2.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr8_-_104155775 Show fit	0.54	ENSRNOT00000042885	LOC102550734 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L31-like
chrM_+_9870 Show fit	0.37	ENSRNOT00000044582	Mt-nd4l Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH 4L dehydrogenase
chr5_+_6373583 Show fit	0.36	ENSRNOT00000084749	AABR07046778.1 Links NCBI RGD Ensembl Show fit
chr2_+_187447501 Show fit	0.34	ENSRNOT00000038589	Iqgap3 Links NCBI RGD Ensembl Show fit	IQ motif containing GTPase activating protein 3
chr7_-_145062956 Show fit	0.24	ENSRNOT00000055274	RGD1563200 Links NCBI RGD Ensembl Show fit	similar to CDNA sequence BC048502
chr10_-_44746549 Show fit	0.24	ENSRNOT00000003841	Fam183b Links NCBI RGD Ensembl Show fit	family with sequence similarity 183, member B
chrM_+_3904 Show fit	0.22	ENSRNOT00000040993	Mt-nd2 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 2
chr10_+_55627025 Show fit	0.21	ENSRNOT00000091016	Aurkb Links NCBI RGD Ensembl Show fit	aurora kinase B
chrX_+_20520034 Show fit	0.21	ENSRNOT00000093170	FAM120C Links NCBI RGD Ensembl Show fit	family with sequence similarity 120C
chr2_-_219262901 Show fit	0.20	ENSRNOT00000037068	Gpr88 Links NCBI RGD Ensembl Show fit	G-protein coupled receptor 88
chr1_+_196095214 Show fit	0.17	ENSRNOT00000080741	LOC691716 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S15a
chr7_+_140608434 Show fit	0.17	ENSRNOT00000001163	AC114446.1 Links NCBI RGD Ensembl Show fit
chrM_+_9451 Show fit	0.16	ENSRNOT00000041241	Mt-nd3 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 3
chrM_+_11736 Show fit	0.16	ENSRNOT00000048767	Mt-nd5 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 5
chrX_+_84064427 Show fit	0.16	ENSRNOT00000046364	Zfp711 Links NCBI RGD Ensembl Show fit	zinc finger protein 711
chr13_+_96303703 Show fit	0.16	ENSRNOT00000084718 ENSRNOT00000029723	Efcab2 Links NCBI RGD Ensembl Show fit	EF-hand calcium binding domain 2
chr2_+_58724855 Show fit	0.16	ENSRNOT00000089609	Capsl Links NCBI RGD Ensembl Show fit	calcyphosine-like
chr20_+_4593389 Show fit	0.15	ENSRNOT00000001174	Slc44a4 Links NCBI RGD Ensembl Show fit	solute carrier family 44, member 4
chr7_-_76035096 Show fit	0.15	ENSRNOT00000072255	AABR07057530.1 Links NCBI RGD Ensembl Show fit
chr15_-_44442875 Show fit	0.15	ENSRNOT00000017939	Gnrh1 Links NCBI RGD Ensembl Show fit	gonadotropin releasing hormone 1
chr8_-_96547568 Show fit	0.14	ENSRNOT00000078343	RGD1560775 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4930579C12 gene
chr1_+_211582077 Show fit	0.14	ENSRNOT00000023619	Pwwp2b Links NCBI RGD Ensembl Show fit	PWWP domain containing 2B
chr1_-_48891130 Show fit	0.14	ENSRNOT00000083884	AC135026.1 Links NCBI RGD Ensembl Show fit
chr8_-_17696989 Show fit	0.14	ENSRNOT00000083752	AABR07069336.1 Links NCBI RGD Ensembl Show fit
chr20_+_46044892 Show fit	0.13	ENSRNOT00000057187	Ak9 Links NCBI RGD Ensembl Show fit	adenylate kinase 9
chr3_-_40477754 Show fit	0.13	ENSRNOT00000091168	AABR07052166.1 Links NCBI RGD Ensembl Show fit
chr1_-_198104109 Show fit	0.13	ENSRNOT00000026186	Sult1a1 Links NCBI RGD Ensembl Show fit	sulfotransferase family 1A member 1
chr15_-_42794279 Show fit	0.13	ENSRNOT00000023385	Ephx2 Links NCBI RGD Ensembl Show fit	epoxide hydrolase 2
chr5_-_17061837 Show fit	0.13	ENSRNOT00000011892	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chr4_+_148782479 Show fit	0.13	ENSRNOT00000018133	LOC500300 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC6835
chr4_+_69386698 Show fit	0.13	ENSRNOT00000091655	Trbv13-2 Links NCBI RGD Ensembl Show fit	T cell receptor beta, variable 13-2
chr2_-_147819335 Show fit	0.13	ENSRNOT00000057909	Ankub1 Links NCBI RGD Ensembl Show fit	ankyrin repeat and ubiquitin domain containing 1
chr2_+_178117466 Show fit	0.13	ENSRNOT00000065115 ENSRNOT00000084198	LOC499643 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ25371
chr4_+_70977556 Show fit	0.13	ENSRNOT00000031984	LOC680112 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680112
chrX_-_70978952 Show fit	0.13	ENSRNOT00000076910	Slc7a3 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 3
chr10_+_55626741 Show fit	0.13	ENSRNOT00000008492	Aurkb Links NCBI RGD Ensembl Show fit	aurora kinase B
chr5_-_17061361 Show fit	0.13	ENSRNOT00000089318	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chrX_-_106607352 Show fit	0.12	ENSRNOT00000082858	AABR07040624.1 Links NCBI RGD Ensembl Show fit
chr4_-_176528110 Show fit	0.12	ENSRNOT00000049569	Slco1a2 Links NCBI RGD Ensembl Show fit	solute carrier organic anion transporter family, member 1A2
chr6_-_91581262 Show fit	0.12	ENSRNOT00000034507	AABR07064716.1 Links NCBI RGD Ensembl Show fit
chr11_-_13999862 Show fit	0.12	ENSRNOT00000045835	Lipi Links NCBI RGD Ensembl Show fit	lipase I
chr10_-_66229311 Show fit	0.12	ENSRNOT00000016897	Lgals5 Links NCBI RGD Ensembl Show fit	lectin, galactose binding, soluble 5
chr2_-_256154584 Show fit	0.12	ENSRNOT00000072487	AABR07013776.1 Links NCBI RGD Ensembl Show fit
chr15_-_59215803 Show fit	0.12	ENSRNOT00000032301	Lacc1 Links NCBI RGD Ensembl Show fit	laccase domain containing 1
chr1_+_80777014 Show fit	0.11	ENSRNOT00000079758	Gm19345 Links NCBI RGD Ensembl Show fit	predicted gene, 19345
chr13_-_83457888 Show fit	0.11	ENSRNOT00000076289 ENSRNOT00000004065	Sft2d2 Links NCBI RGD Ensembl Show fit	SFT2 domain containing 2
chr5_-_134927235 Show fit	0.11	ENSRNOT00000016751	Uqcrh Links NCBI RGD Ensembl Show fit	ubiquinol-cytochrome c reductase hinge protein
chr10_+_56445647 Show fit	0.11	ENSRNOT00000056870	Tmem256 Links NCBI RGD Ensembl Show fit	transmembrane protein 256
chr19_+_15081590 Show fit	0.11	ENSRNOT00000024187	Ces1f Links NCBI RGD Ensembl Show fit	carboxylesterase 1F
chr15_+_36809361 Show fit	0.11	ENSRNOT00000076667	Parp4 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 4
chr7_-_54855557 Show fit	0.11	ENSRNOT00000039475	Glipr1l1 Links NCBI RGD Ensembl Show fit	GLI pathogenesis-related 1 like 1
chr10_-_34242985 Show fit	0.11	ENSRNOT00000046438	RGD1559575 Links NCBI RGD Ensembl Show fit	similar to novel protein
chr18_-_6587080 Show fit	0.11	ENSRNOT00000040815	LOC103694404 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L39
chr3_-_4341771 Show fit	0.11	ENSRNOT00000034694	LOC684988 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S13
chr1_+_86972244 Show fit	0.11	ENSRNOT00000036907	Rinl Links NCBI RGD Ensembl Show fit	Ras and Rab interactor-like
chr1_+_185863043 Show fit	0.11	ENSRNOT00000079072	Sox6 Links NCBI RGD Ensembl Show fit	SRY box 6
chr15_+_11298478 Show fit	0.11	ENSRNOT00000007672	Lrrc3b Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 3B
chr15_+_87722221 Show fit	0.10	ENSRNOT00000082688	Scel Links NCBI RGD Ensembl Show fit	sciellin
chr17_+_11683862 Show fit	0.10	ENSRNOT00000024766	Msx2 Links NCBI RGD Ensembl Show fit	msh homeobox 2
chr1_+_98414226 Show fit	0.10	ENSRNOT00000090785	Siglecl1 Links NCBI RGD Ensembl Show fit	SIGLEC family like 1
chr10_-_13004441 Show fit	0.10	ENSRNOT00000004848	Cldn9 Links NCBI RGD Ensembl Show fit	claudin 9
chr4_+_31333970 Show fit	0.10	ENSRNOT00000064866	LOC100911994 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 132-like
chr8_+_70994563 Show fit	0.10	ENSRNOT00000051504 ENSRNOT00000077163	Spg21 Links NCBI RGD Ensembl Show fit	spastic paraplegia 21 homolog (human)
chr3_+_172374957 Show fit	0.10	ENSRNOT00000035916	Gnas Links NCBI RGD Ensembl Show fit	GNAS complex locus
chr3_+_94530586 Show fit	0.10	ENSRNOT00000067860	Cstf3 Links NCBI RGD Ensembl Show fit	cleavage stimulation factor subunit 3
chr20_+_8484311 Show fit	0.10	ENSRNOT00000050041	LOC100364116 Links NCBI RGD Ensembl Show fit	ribosomal protein S20-like
chr17_+_24416651 Show fit	0.10	ENSRNOT00000024458	Cd83 Links NCBI RGD Ensembl Show fit	CD83 molecule
chr2_-_149444548 Show fit	0.10	ENSRNOT00000018600	P2ry12 Links NCBI RGD Ensembl Show fit	purinergic receptor P2Y12
chr11_+_38727048 Show fit	0.10	ENSRNOT00000081537	LOC103690343 Links NCBI RGD Ensembl Show fit	zinc finger protein 260-like
chr4_-_51844331 Show fit	0.09	ENSRNOT00000003593	Gpr37 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 37
chr3_-_143192408 Show fit	0.09	ENSRNOT00000006885	LOC689081 Links NCBI RGD Ensembl Show fit	similar to cystatin E2
chr12_+_41463922 Show fit	0.09	ENSRNOT00000089378	Cfap73 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 73
chr11_-_71136673 Show fit	0.09	ENSRNOT00000042240	Fyttd1 Links NCBI RGD Ensembl Show fit	forty-two-three domain containing 1
chr13_+_89386023 Show fit	0.09	ENSRNOT00000086223	Fcgr3a Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor IIIa
chr2_-_27287605 Show fit	0.09	ENSRNOT00000034041	Ankdd1b Links NCBI RGD Ensembl Show fit	ankyrin repeat and death domain containing 1B
chr20_+_2004052 Show fit	0.09	ENSRNOT00000001008	Mog Links NCBI RGD Ensembl Show fit	myelin oligodendrocyte glycoprotein
chr1_-_102741581 Show fit	0.09	ENSRNOT00000016254	LOC691143 Links NCBI RGD Ensembl Show fit	similar to Serum amyloid A-3 protein precursor
chr5_+_36566783 Show fit	0.09	ENSRNOT00000077650	Fbxl4 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 4
chr4_-_176909075 Show fit	0.09	ENSRNOT00000067489	Abcc9 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily C member 9
chr4_-_164453171 Show fit	0.09	ENSRNOT00000077539 ENSRNOT00000083610 ENSRNOT00000079975	Ly49s6 Links NCBI RGD Ensembl Show fit	Ly49 stimulatory receptor 6
chr8_+_76426335 Show fit	0.09	ENSRNOT00000085496	Gtf2a2 Links NCBI RGD Ensembl Show fit	general transcription factor2A subunit 2
chr1_-_78180216 Show fit	0.09	ENSRNOT00000071576	C5ar2 Links NCBI RGD Ensembl Show fit	complement component 5a receptor 2
chr1_+_252409268 Show fit	0.09	ENSRNOT00000026219	Lipm Links NCBI RGD Ensembl Show fit	lipase, family member M
chrM_+_7006 Show fit	0.08	ENSRNOT00000043693	Mt-co2 Links NCBI RGD Ensembl Show fit	mitochondrially encoded cytochrome c oxidase II
chrM_+_7919 Show fit	0.08	ENSRNOT00000046108	Mt-atp6 Links NCBI RGD Ensembl Show fit	mitochondrially encoded ATP synthase 6
chrX_+_118197217 Show fit	0.08	ENSRNOT00000090922	Htr2c Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 2C
chr5_-_12172009 Show fit	0.08	ENSRNOT00000061903	Pcmtd1 Links NCBI RGD Ensembl Show fit	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
chr18_+_16330615 Show fit	0.08	ENSRNOT00000049689	RGD1559877 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L29 (P23)
chr3_-_90751055 Show fit	0.08	ENSRNOT00000040741	LOC499843 Links NCBI RGD Ensembl Show fit	LRRGT00091
chr2_+_153803349 Show fit	0.08	ENSRNOT00000088565	Mme Links NCBI RGD Ensembl Show fit	membrane metallo-endopeptidase
chrM_+_14136 Show fit	0.08	ENSRNOT00000042098	Mt-cyb Links NCBI RGD Ensembl Show fit	mitochondrially encoded cytochrome b
chr8_+_2604962 Show fit	0.08	ENSRNOT00000009993	Casp1 Links NCBI RGD Ensembl Show fit	caspase 1
chr8_-_109560747 Show fit	0.08	ENSRNOT00000087334	Ppp2r3a Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B'', alpha
chr7_-_29949603 Show fit	0.08	ENSRNOT00000009419	LOC103692829 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L9 pseudogene
chr9_+_95161157 Show fit	0.08	ENSRNOT00000071200	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr9_-_14550625 Show fit	0.08	ENSRNOT00000078227	Oard1 Links NCBI RGD Ensembl Show fit	O-acyl-ADP-ribose deacylase 1
chr18_+_87637608 Show fit	0.08	ENSRNOT00000070851	LOC102550729 Links NCBI RGD Ensembl Show fit	zinc finger protein 120-like
chr11_-_29710849 Show fit	0.08	ENSRNOT00000029345	Krtap11-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 11-1
chr1_-_57518458 Show fit	0.08	ENSRNOT00000002040	Pdcd2 Links NCBI RGD Ensembl Show fit	programmed cell death 2
chr11_+_36851038 Show fit	0.08	ENSRNOT00000002221 ENSRNOT00000061047	Pcp4 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4
chr20_-_27117663 Show fit	0.08	ENSRNOT00000000434	Pbld1 Links NCBI RGD Ensembl Show fit	phenazine biosynthesis-like protein domain containing 1
chr2_+_187951344 Show fit	0.08	ENSRNOT00000027123	Ssr2 Links NCBI RGD Ensembl Show fit	signal sequence receptor, beta
chr1_+_207508414 Show fit	0.08	ENSRNOT00000054896	Nps Links NCBI RGD Ensembl Show fit	neuropeptide S
chrM_+_2740 Show fit	0.08	ENSRNOT00000047550	Mt-nd1 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 1
chrM_+_8599 Show fit	0.08	ENSRNOT00000049683	Mt-cox3 Links NCBI RGD Ensembl Show fit	mitochondrially encoded cytochrome C oxidase III
chr10_+_88227360 Show fit	0.08	ENSRNOT00000041033	Eif1 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 1
chr2_+_88344527 Show fit	0.07	ENSRNOT00000059467	RGD1565641 Links NCBI RGD Ensembl Show fit	RGD1565641
chrX_+_14019961 Show fit	0.07	ENSRNOT00000004785	Sytl5 Links NCBI RGD Ensembl Show fit	synaptotagmin-like 5
chr7_+_144052061 Show fit	0.07	ENSRNOT00000020103 ENSRNOT00000091378	Amhr2 Links NCBI RGD Ensembl Show fit	anti-Mullerian hormone receptor type 2
chr14_-_18704059 Show fit	0.07	ENSRNOT00000081455	Mthfd2l Links NCBI RGD Ensembl Show fit	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
chr3_-_114251647 Show fit	0.07	ENSRNOT00000024245	Duoxa1 Links NCBI RGD Ensembl Show fit	dual oxidase maturation factor 1
chr3_-_148493225 Show fit	0.07	ENSRNOT00000012141	Pdrg1 Links NCBI RGD Ensembl Show fit	p53 and DNA damage regulated 1
chr9_+_66058047 Show fit	0.07	ENSRNOT00000071819	Cdk15 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 15
chr1_+_15834779 Show fit	0.07	ENSRNOT00000079069 ENSRNOT00000083012	Bclaf1 Links NCBI RGD Ensembl Show fit	BCL2-associated transcription factor 1
chr1_-_276228574 Show fit	0.07	ENSRNOT00000021746	Gucy2g Links NCBI RGD Ensembl Show fit	guanylate cyclase 2G
chr2_+_66940057 Show fit	0.07	ENSRNOT00000043050	Cdh9 Links NCBI RGD Ensembl Show fit	cadherin 9
chr3_-_57646572 Show fit	0.07	ENSRNOT00000076202	Mettl8 Links NCBI RGD Ensembl Show fit	methyltransferase like 8
chrX_+_28593405 Show fit	0.07	ENSRNOT00000071708	Tmsb4x Links NCBI RGD Ensembl Show fit	thymosin beta 4, X-linked
chr7_-_143324536 Show fit	0.07	ENSRNOT00000011644	Krt5 Links NCBI RGD Ensembl Show fit	keratin 5
chr4_+_2053712 Show fit	0.07	ENSRNOT00000045086	Rnf32 Links NCBI RGD Ensembl Show fit	ring finger protein 32
chr17_+_21600432 Show fit	0.07	ENSRNOT00000060340	RGD1562963 Links NCBI RGD Ensembl Show fit	similar to chromosome 6 open reading frame 52
chr3_+_47578384 Show fit	0.07	ENSRNOT00000082769	Psmd14 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 14
chr5_-_127983515 Show fit	0.07	ENSRNOT00000043054	Fam159a Links NCBI RGD Ensembl Show fit	family with sequence similarity 159, member A
chr18_-_40452456 Show fit	0.07	ENSRNOT00000004747	Mospd4 Links NCBI RGD Ensembl Show fit	motile sperm domain containing 4
chr18_+_81821127 Show fit	0.07	ENSRNOT00000058199	Fbxo15 Links NCBI RGD Ensembl Show fit	F-box protein 15
chr5_-_157268903 Show fit	0.07	ENSRNOT00000022716	Pla2g5 Links NCBI RGD Ensembl Show fit	phospholipase A2, group V
chr2_+_127489771 Show fit	0.07	ENSRNOT00000093581	Intu Links NCBI RGD Ensembl Show fit	inturned planar cell polarity protein
chr14_+_3204390 Show fit	0.07	ENSRNOT00000088078	Glmn Links NCBI RGD Ensembl Show fit	glomulin, FKBP associated protein
chr19_+_15081158 Show fit	0.07	ENSRNOT00000074070	Ces1f Links NCBI RGD Ensembl Show fit	carboxylesterase 1F
chr1_+_61268248 Show fit	0.07	ENSRNOT00000082730	LOC102552527 Links NCBI RGD Ensembl Show fit	zinc finger protein 420-like
chr1_+_116604550 Show fit	0.07	ENSRNOT00000083587	Ube3a Links NCBI RGD Ensembl Show fit	ubiquitin protein ligase E3A
chr1_-_71373605 Show fit	0.07	ENSRNOT00000034854	Galp Links NCBI RGD Ensembl Show fit	galanin-like peptide
chr3_+_154437571 Show fit	0.07	ENSRNOT00000019331	AABR07054456.1 Links NCBI RGD Ensembl Show fit
chr4_+_6827429 Show fit	0.07	ENSRNOT00000071737	Rheb Links NCBI RGD Ensembl Show fit	Ras homolog enriched in brain
chr11_+_88095170 Show fit	0.07	ENSRNOT00000041557	Ccdc116 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 116
chr2_+_145174876 Show fit	0.06	ENSRNOT00000040631	Mab21l1 Links NCBI RGD Ensembl Show fit	mab-21 like 1
chr11_-_54545230 Show fit	0.06	ENSRNOT00000002676	Retnla Links NCBI RGD Ensembl Show fit	resistin like alpha
chr3_-_153114520 Show fit	0.06	ENSRNOT00000008254	Dsn1 Links NCBI RGD Ensembl Show fit	DSN1 homolog, MIS12 kinetochore complex component
chr14_+_108415068 Show fit	0.06	ENSRNOT00000083763	Pus10 Links NCBI RGD Ensembl Show fit	pseudouridylate synthase 10
chr2_-_27296777 Show fit	0.06	ENSRNOT00000080748	Ankdd1b Links NCBI RGD Ensembl Show fit	ankyrin repeat and death domain containing 1B
chrX_-_37705263 Show fit	0.06	ENSRNOT00000043666	Map3k15 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase 15
chr9_-_30251388 Show fit	0.06	ENSRNOT00000035033	Sdhaf4 Links NCBI RGD Ensembl Show fit	succinate dehydrogenase complex assembly factor 4
chr14_+_18983853 Show fit	0.06	ENSRNOT00000003836	Rassf6 Links NCBI RGD Ensembl Show fit	Ras association domain family member 6
chr1_-_282492912 Show fit	0.06	ENSRNOT00000047883	AABR07007130.1 Links NCBI RGD Ensembl Show fit
chr7_-_28711761 Show fit	0.06	ENSRNOT00000006249	Parpbp Links NCBI RGD Ensembl Show fit	PARP1 binding protein
chr2_+_202200797 Show fit	0.06	ENSRNOT00000042263 ENSRNOT00000071938	Spag17 Links NCBI RGD Ensembl Show fit	sperm associated antigen 17
chrX_-_45284341 Show fit	0.06	ENSRNOT00000045436	Obp1f Links NCBI RGD Ensembl Show fit	odorant binding protein I f
chr1_-_38538987 Show fit	0.06	ENSRNOT00000090406 ENSRNOT00000071275	LOC102551340 Links NCBI RGD Ensembl Show fit	zinc finger protein 728-like
chr18_+_45023932 Show fit	0.06	ENSRNOT00000039379	Fam170a Links NCBI RGD Ensembl Show fit	family with sequence similarity 170, member A
chr6_+_93385457 Show fit	0.06	ENSRNOT00000010300	Actr10 Links NCBI RGD Ensembl Show fit	actin-related protein 10 homolog
chr5_+_126668689 Show fit	0.06	ENSRNOT00000036072	Cyb5rl Links NCBI RGD Ensembl Show fit	cytochrome b5 reductase-like
chr20_+_48503973 Show fit	0.06	ENSRNOT00000064081	Cdc40 Links NCBI RGD Ensembl Show fit	cell division cycle 40
chr5_+_78384444 Show fit	0.06	ENSRNOT00000034978	LOC500475 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein 4933430I17
chr7_-_55604403 Show fit	0.06	ENSRNOT00000088732	Atxn7l3b Links NCBI RGD Ensembl Show fit	ataxin 7-like 3B
chr4_+_181103774 Show fit	0.06	ENSRNOT00000084207 ENSRNOT00000055473 ENSRNOT00000077619	Arntl2 Links NCBI RGD Ensembl Show fit	aryl hydrocarbon receptor nuclear translocator-like 2
chrX_+_45213228 Show fit	0.06	ENSRNOT00000088538	LOC103690319 Links NCBI RGD Ensembl Show fit	odorant-binding protein
chr8_-_133128290 Show fit	0.06	ENSRNOT00000008783	Ccr1l1 Links NCBI RGD Ensembl Show fit	chemokine (C-C motif) receptor 1-like 1
chr19_-_49448072 Show fit	0.06	ENSRNOT00000014997	Cmc2 Links NCBI RGD Ensembl Show fit	C-x(9)-C motif containing 2
chr6_+_76349362 Show fit	0.06	ENSRNOT00000043224	Aldoart2 Links NCBI RGD Ensembl Show fit	aldolase 1 A retrogene 2
chr1_-_94404211 Show fit	0.06	ENSRNOT00000019463	Uri1 Links NCBI RGD Ensembl Show fit	URI1, prefoldin-like chaperone
chr16_+_71889235 Show fit	0.06	ENSRNOT00000038266	Adam32 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 32
chr10_+_91126689 Show fit	0.06	ENSRNOT00000004046	Nmt1 Links NCBI RGD Ensembl Show fit	N-myristoyltransferase 1
chr10_+_74413989 Show fit	0.06	ENSRNOT00000036098	Ska2 Links NCBI RGD Ensembl Show fit	spindle and kinetochore associated complex subunit 2
chr17_-_52477575 Show fit	0.06	ENSRNOT00000081290	Gli3 Links NCBI RGD Ensembl Show fit	GLI family zinc finger 3
chr10_-_56506446 Show fit	0.06	ENSRNOT00000021357	Acap1 Links NCBI RGD Ensembl Show fit	ArfGAP with coiled-coil, ankyrin repeat and PH domains 1
chr10_-_44147035 Show fit	0.06	ENSRNOT00000041113	Olr1424 Links NCBI RGD Ensembl Show fit	olfactory receptor 1424
chr4_-_89695928 Show fit	0.06	ENSRNOT00000039316	Gprin3 Links NCBI RGD Ensembl Show fit	GPRIN family member 3
chr8_-_21384131 Show fit	0.06	ENSRNOT00000071010	Zfp560 Links NCBI RGD Ensembl Show fit	zinc finger protein 560
chr1_+_222861777 Show fit	0.06	ENSRNOT00000090872	Pla2g16 Links NCBI RGD Ensembl Show fit	phospholipase A2, group XVI
chr14_-_6533524 Show fit	0.06	ENSRNOT00000079795	Abcg3l1 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily G (WHITE), member 3-like 1
chr1_-_224698514 Show fit	0.06	ENSRNOT00000024234	Slc22a25 Links NCBI RGD Ensembl Show fit	solute carrier family 22, member 25
chr1_+_61374379 Show fit	0.06	ENSRNOT00000015343	Zfp53 Links NCBI RGD Ensembl Show fit	zinc finger protein 53
chr7_+_29909120 Show fit	0.06	ENSRNOT00000049362	AABR07056556.1 Links NCBI RGD Ensembl Show fit
chr13_-_47916185 Show fit	0.06	ENSRNOT00000087793	Dyrk3 Links NCBI RGD Ensembl Show fit	dual specificity tyrosine phosphorylation regulated kinase 3
chr8_+_22559098 Show fit	0.06	ENSRNOT00000041091	LOC691141 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691141
chr15_+_33885106 Show fit	0.06	ENSRNOT00000024483	Dhrs2 Links NCBI RGD Ensembl Show fit	dehydrogenase/reductase 2
chr10_+_39850818 Show fit	0.06	ENSRNOT00000012671	Fnip1 Links NCBI RGD Ensembl Show fit	folliculin interacting protein 1
chr18_-_36579403 Show fit	0.06	ENSRNOT00000025284	Lars Links NCBI RGD Ensembl Show fit	leucyl-tRNA synthetase
chr10_-_51778939 Show fit	0.06	ENSRNOT00000078675 ENSRNOT00000057562	Myocd Links NCBI RGD Ensembl Show fit	myocardin
chr2_+_184243976 Show fit	0.06	ENSRNOT00000042146	Dear Links NCBI RGD Ensembl Show fit	dual endothelin 1, angiotensin II receptor
chr17_+_45467015 Show fit	0.06	ENSRNOT00000081408	Gpx5 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 5
chr12_-_17186679 Show fit	0.06	ENSRNOT00000001730	Uncx Links NCBI RGD Ensembl Show fit	UNC homeobox
chr5_+_50381244 Show fit	0.06	ENSRNOT00000012385	Cga Links NCBI RGD Ensembl Show fit	glycoprotein hormones, alpha polypeptide
chr7_-_107203897 Show fit	0.06	ENSRNOT00000086263	Lrrc6 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 6
chr13_+_111890894 Show fit	0.06	ENSRNOT00000007341	LOC100125367 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC100125367
chr2_+_243425007 Show fit	0.05	ENSRNOT00000082894	Trmt10a Links NCBI RGD Ensembl Show fit	tRNA methyltransferase 10A
chr7_+_15422479 Show fit	0.05	ENSRNOT00000066520	Zfp563 Links NCBI RGD Ensembl Show fit	zinc finger protein 563
chr18_-_26656879 Show fit	0.05	ENSRNOT00000086729	Epb41l4a Links NCBI RGD Ensembl Show fit	erythrocyte membrane protein band 4.1 like 4A
chr8_+_122076759 Show fit	0.05	ENSRNOT00000012545	Clasp2 Links NCBI RGD Ensembl Show fit	cytoplasmic linker associated protein 2
chr12_+_46042413 Show fit	0.05	ENSRNOT00000046882	Ccdc60 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 60
chr4_+_112662609 Show fit	0.05	ENSRNOT00000009104	Gcfc2 Links NCBI RGD Ensembl Show fit	GC-rich sequence DNA-binding factor 2
chr16_+_72010106 Show fit	0.05	ENSRNOT00000058330	Adam5 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 5
chr8_-_72204730 Show fit	0.05	ENSRNOT00000023810	Fbxl22 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 22
chr3_-_2309179 Show fit	0.05	ENSRNOT00000012375	Noxa1 Links NCBI RGD Ensembl Show fit	NADPH oxidase activator 1
chr3_+_10036461 Show fit	0.05	ENSRNOT00000073731	Qrfp Links NCBI RGD Ensembl Show fit	pyroglutamylated RFamide peptide
chrX_-_121731543 Show fit	0.05	ENSRNOT00000018788	Klhl13 Links NCBI RGD Ensembl Show fit	kelch-like family member 13
chr2_-_90568486 Show fit	0.05	ENSRNOT00000059380	LOC100910852 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100910852
chr3_-_133131192 Show fit	0.05	ENSRNOT00000055630	Tasp1 Links NCBI RGD Ensembl Show fit	taspase 1
chr9_-_121972055 Show fit	0.05	ENSRNOT00000089735	AABR07068851.1 Links NCBI RGD Ensembl Show fit	clusterin-like protein 1
chr13_-_45127815 Show fit	0.05	ENSRNOT00000005127	Dars Links NCBI RGD Ensembl Show fit	aspartyl-tRNA synthetase

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0051867	general adaptation syndrome, behavioral process(GO:0051867)
0.1	0.3	GO:0043988	histone H3-S28 phosphorylation(GO:0043988)
0.0	0.0	GO:0043179	rhythmic excitation(GO:0043179)
0.0	0.1	GO:0009216	purine deoxyribonucleoside diphosphate metabolic process(GO:0009182) purine deoxyribonucleoside triphosphate biosynthetic process(GO:0009216) dGDP metabolic process(GO:0046066)
0.0	0.1	GO:1900673	olefin metabolic process(GO:1900673)
0.0	0.1	GO:0090024	negative regulation of granulocyte chemotaxis(GO:0071623) negative regulation of neutrophil chemotaxis(GO:0090024)
0.0	0.2	GO:0061743	motor learning(GO:0061743)
0.0	0.0	GO:0009441	glycolate metabolic process(GO:0009441)
0.0	0.1	GO:0035880	embryonic nail plate morphogenesis(GO:0035880)
0.0	0.1	GO:0040032	post-embryonic body morphogenesis(GO:0040032)
0.0	0.1	GO:1904139	microglial cell migration(GO:1904124) regulation of microglial cell migration(GO:1904139)
0.0	0.2	GO:1900620	acetylcholine biosynthetic process(GO:0008292) acetate ester biosynthetic process(GO:1900620)
0.0	0.2	GO:2000354	regulation of ovarian follicle development(GO:2000354)
0.0	0.1	GO:0000962	mitochondrial mRNA catabolic process(GO:0000958) positive regulation of mitochondrial RNA catabolic process(GO:0000962)
0.0	0.3	GO:0033601	positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.0	0.1	GO:0031583	phospholipase D-activating G-protein coupled receptor signaling pathway(GO:0031583)
0.0	0.2	GO:0050427	purine ribonucleoside bisphosphate metabolic process(GO:0034035) 3'-phosphoadenosine 5'-phosphosulfate metabolic process(GO:0050427)
0.0	0.1	GO:0090249	cell motility involved in somitogenic axis elongation(GO:0090247) regulation of cell motility involved in somitogenic axis elongation(GO:0090249)
0.0	0.1	GO:0060392	negative regulation of SMAD protein import into nucleus(GO:0060392)
0.0	0.1	GO:1903401	L-lysine transmembrane transport(GO:1903401)
0.0	0.1	GO:1900245	positive regulation of MDA-5 signaling pathway(GO:1900245)
0.0	0.1	GO:1904158	axonemal central apparatus assembly(GO:1904158)
0.0	0.1	GO:0000105	histidine biosynthetic process(GO:0000105)
0.0	0.1	GO:0006663	platelet activating factor biosynthetic process(GO:0006663)
0.0	0.1	GO:0071492	cellular response to UV-A(GO:0071492)
0.0	0.1	GO:0018201	peptidyl-glycine modification(GO:0018201)
0.0	0.1	GO:0050717	positive regulation of interleukin-1 alpha secretion(GO:0050717)
0.0	0.1	GO:1904009	cellular response to monosodium glutamate(GO:1904009)
0.0	0.1	GO:0006438	valyl-tRNA aminoacylation(GO:0006438)
0.0	0.1	GO:1900222	regulation of cell growth by extracellular stimulus(GO:0001560) negative regulation of beta-amyloid clearance(GO:1900222) positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721)
0.0	0.1	GO:0033123	positive regulation of purine nucleotide catabolic process(GO:0033123)
0.0	0.1	GO:0031119	tRNA pseudouridine synthesis(GO:0031119)
0.0	0.1	GO:2000741	positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0	0.1	GO:0060327	cytoplasmic actin-based contraction involved in cell motility(GO:0060327)
0.0	1.1	GO:0042773	ATP synthesis coupled electron transport(GO:0042773)
0.0	0.0	GO:0072702	myofibroblast differentiation(GO:0036446) response to methyl methanesulfonate(GO:0072702) cellular response to methyl methanesulfonate(GO:0072703) regulation of myofibroblast differentiation(GO:1904760)
0.0	0.0	GO:0002581	negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581)
0.0	0.1	GO:0032713	negative regulation of interleukin-4 production(GO:0032713)
0.0	0.1	GO:2000483	negative regulation of interleukin-8 secretion(GO:2000483)
0.0	0.1	GO:1901475	pyruvate transmembrane transport(GO:1901475)
0.0	0.1	GO:0010841	positive regulation of circadian sleep/wake cycle, wakefulness(GO:0010841)
0.0	0.1	GO:0021776	smoothened signaling pathway involved in ventral spinal cord interneuron specification(GO:0021775) smoothened signaling pathway involved in spinal cord motor neuron cell fate specification(GO:0021776)
0.0	0.2	GO:0009642	response to light intensity(GO:0009642)
0.0	0.1	GO:0052697	xenobiotic glucuronidation(GO:0052697)
0.0	0.1	GO:0070327	thyroid hormone transport(GO:0070327)
0.0	0.0	GO:0032730	positive regulation of interleukin-1 alpha production(GO:0032730) interleukin-1 biosynthetic process(GO:0042222)
0.0	0.1	GO:1902164	positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator(GO:1902164)
0.0	0.1	GO:1902035	positive regulation of hematopoietic stem cell proliferation(GO:1902035)
0.0	0.1	GO:0000480	endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.0	0.1	GO:0060382	regulation of DNA strand elongation(GO:0060382)
0.0	0.1	GO:2000609	regulation of thyroid hormone generation(GO:2000609)
0.0	0.0	GO:0051030	snRNA transport(GO:0051030)
0.0	0.1	GO:0051182	coenzyme transport(GO:0051182)
0.0	0.0	GO:0033385	geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0	0.0	GO:0045575	basophil activation(GO:0045575)
0.0	0.0	GO:0014707	branchiomeric skeletal muscle development(GO:0014707)
0.0	0.1	GO:0045915	positive regulation of catecholamine metabolic process(GO:0045915) positive regulation of dopamine metabolic process(GO:0045964)
0.0	0.1	GO:0035617	stress granule disassembly(GO:0035617)
0.0	0.1	GO:0002904	positive regulation of B cell apoptotic process(GO:0002904)
0.0	0.1	GO:0086100	endothelin receptor signaling pathway(GO:0086100)
0.0	0.0	GO:0015680	intracellular copper ion transport(GO:0015680)
0.0	0.0	GO:0032218	riboflavin transport(GO:0032218)
0.0	0.1	GO:0002430	complement receptor mediated signaling pathway(GO:0002430)
0.0	0.0	GO:1903564	regulation of protein localization to cilium(GO:1903564)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0032133	chromosome passenger complex(GO:0032133)
0.0	0.3	GO:0032280	symmetric synapse(GO:0032280)
0.0	0.2	GO:1990005	granular vesicle(GO:1990005)
0.0	0.1	GO:0045025	mitochondrial degradosome(GO:0045025)
0.0	0.1	GO:0008282	ATP-sensitive potassium channel complex(GO:0008282)
0.0	1.1	GO:0030964	mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0	0.1	GO:1990716	axonemal central apparatus(GO:1990716)
0.0	0.1	GO:0035577	azurophil granule membrane(GO:0035577)
0.0	0.0	GO:0045203	intrinsic component of cell outer membrane(GO:0031230) integral component of cell outer membrane(GO:0045203)
0.0	0.2	GO:0045275	respiratory chain complex III(GO:0045275)
0.0	0.1	GO:0000444	MIS12/MIND type complex(GO:0000444)
0.0	0.1	GO:0072557	IPAF inflammasome complex(GO:0072557) NLRP1 inflammasome complex(GO:0072558) AIM2 inflammasome complex(GO:0097169)
0.0	0.1	GO:0005672	transcription factor TFIIA complex(GO:0005672)
0.0	0.1	GO:0071008	U2-type post-mRNA release spliceosomal complex(GO:0071008)
0.0	0.1	GO:0008541	proteasome regulatory particle, lid subcomplex(GO:0008541)
0.0	0.0	GO:0036156	inner dynein arm(GO:0036156)
0.0	0.0	GO:0005846	nuclear cap binding complex(GO:0005846)
0.0	0.0	GO:0005594	collagen type IX trimer(GO:0005594)
0.0	0.0	GO:0043541	UDP-N-acetylglucosamine transferase complex(GO:0043541)
0.0	0.0	GO:0034457	Mpp10 complex(GO:0034457)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0032027	myosin light chain binding(GO:0032027)
0.1	0.2	GO:0050294	steroid sulfotransferase activity(GO:0050294)
0.0	0.1	GO:0050145	nucleoside phosphate kinase activity(GO:0050145)
0.0	0.3	GO:0001515	opioid peptide activity(GO:0001515)
0.0	1.1	GO:0050136	NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0	0.4	GO:0035174	histone serine kinase activity(GO:0035174)
0.0	0.1	GO:0008281	sulfonylurea receptor activity(GO:0008281)
0.0	0.1	GO:0001847	opsonin receptor activity(GO:0001847)
0.0	0.1	GO:0004301	epoxide hydrolase activity(GO:0004301)
0.0	0.1	GO:0019770	IgG receptor activity(GO:0019770)
0.0	0.2	GO:0016681	ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0	0.1	GO:0071886	1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding(GO:0071886)
0.0	0.1	GO:0005171	hepatocyte growth factor receptor binding(GO:0005171)
0.0	0.1	GO:0042392	sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.0	0.1	GO:0015189	L-lysine transmembrane transporter activity(GO:0015189)
0.0	0.1	GO:0004982	N-formyl peptide receptor activity(GO:0004982)
0.0	0.1	GO:0015349	thyroid hormone transmembrane transporter activity(GO:0015349)
0.0	0.1	GO:0070181	small ribosomal subunit rRNA binding(GO:0070181)
0.0	0.1	GO:0051185	coenzyme transporter activity(GO:0051185)
0.0	0.1	GO:0004832	valine-tRNA ligase activity(GO:0004832)
0.0	0.1	GO:0004487	methylenetetrahydrofolate dehydrogenase (NAD+) activity(GO:0004487)
0.0	0.1	GO:0033149	FFAT motif binding(GO:0033149)
0.0	0.1	GO:0051430	corticotropin-releasing hormone receptor 1 binding(GO:0051430)
0.0	0.1	GO:0050833	pyruvate transmembrane transporter activity(GO:0050833)
0.0	0.1	GO:0061133	endopeptidase activator activity(GO:0061133)
0.0	0.0	GO:0004574	oligo-1,6-glucosidase activity(GO:0004574)
0.0	0.1	GO:0004945	angiotensin type II receptor activity(GO:0004945)
0.0	0.1	GO:0001609	G-protein coupled adenosine receptor activity(GO:0001609)
0.0	0.1	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor(GO:0016899)
0.0	0.0	GO:0031714	C5a anaphylatoxin chemotactic receptor binding(GO:0031714)
0.0	0.0	GO:0003842	1-pyrroline-5-carboxylate dehydrogenase activity(GO:0003842)
0.0	0.1	GO:0004090	carbonyl reductase (NADPH) activity(GO:0004090)
0.0	0.1	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity(GO:0009019)
0.0	0.0	GO:0004963	follicle-stimulating hormone receptor activity(GO:0004963)
0.0	0.0	GO:0032217	riboflavin transporter activity(GO:0032217)
0.0	0.0	GO:0004605	phosphatidate cytidylyltransferase activity(GO:0004605)
0.0	0.0	GO:0008169	C-methyltransferase activity(GO:0008169)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME HORMONE LIGAND BINDING RECEPTORS	Genes involved in Hormone ligand-binding receptors
0.0	0.0	REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G	Genes involved in Vif-mediated degradation of APOBEC3G
0.0	0.2	REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES	Genes involved in Cytosolic sulfonation of small molecules
0.0	0.1	REACTOME TRANSPORT OF ORGANIC ANIONS	Genes involved in Transport of organic anions