GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Foxn1 Links NCBI RGD Ensembl	ENSRNOG00000010870	forkhead box N1

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_-_26094756 Show fit	0.10	ENSRNOT00000067780	Junb Links NCBI RGD Ensembl Show fit	JunB proto-oncogene, AP-1 transcription factor subunit
chr5_-_156811650 Show fit	0.07	ENSRNOT00000068065	Fam43b Links NCBI RGD Ensembl Show fit	family with sequence similarity 43, member B
chr16_-_20486707 Show fit	0.05	ENSRNOT00000026470	Jund Links NCBI RGD Ensembl Show fit	JunD proto-oncogene, AP-1 transcription factor subunit
chr9_+_102862890 Show fit	0.04	ENSRNOT00000050494 ENSRNOT00000080129	Fam174a Links NCBI RGD Ensembl Show fit	family with sequence similarity 174, member A
chr10_-_38985466 Show fit	0.03	ENSRNOT00000010121	Il13 Links NCBI RGD Ensembl Show fit	interleukin 13
chr5_+_156810991 Show fit	0.02	ENSRNOT00000055904	AABR07050222.1 Links NCBI RGD Ensembl Show fit
chr8_-_70215719 Show fit	0.02	ENSRNOT00000015598	Rab11a Links NCBI RGD Ensembl Show fit	RAB11a, member RAS oncogene family
chr12_+_47074200 Show fit	0.02	ENSRNOT00000014910	Dynll1 Links NCBI RGD Ensembl Show fit	dynein light chain LC8-type 1
chr7_-_58365313 Show fit	0.02	ENSRNOT00000005443	Thap2 Links NCBI RGD Ensembl Show fit	THAP domain containing 2
chr6_+_109939345 Show fit	0.01	ENSRNOT00000013560	Ift43 Links NCBI RGD Ensembl Show fit	intraflagellar transport 43
chr10_+_85301875 Show fit	0.01	ENSRNOT00000080935	Socs7 Links NCBI RGD Ensembl Show fit	suppressor of cytokine signaling 7
chr1_+_87066289 Show fit	0.01	ENSRNOT00000027645	Capn12 Links NCBI RGD Ensembl Show fit	calpain 12
chr10_-_88645364 Show fit	0.01	ENSRNOT00000030344	Rab5c Links NCBI RGD Ensembl Show fit	RAB5C, member RAS oncogene family
chr13_-_79801561 Show fit	0.01	ENSRNOT00000075936	Suco Links NCBI RGD Ensembl Show fit	SUN domain containing ossification factor
chr1_-_143647124 Show fit	0.01	ENSRNOT00000026595	Btbd1 Links NCBI RGD Ensembl Show fit	BTB domain containing 1
chr5_+_57028467 Show fit	0.01	ENSRNOT00000010061	Dnaja1 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member A1
chr1_-_165382216 Show fit	0.01	ENSRNOT00000023648	Ppme1 Links NCBI RGD Ensembl Show fit	protein phosphatase methylesterase 1
chr10_-_56850085 Show fit	0.01	ENSRNOT00000025767	Rnasek Links NCBI RGD Ensembl Show fit	ribonuclease K
chr16_+_7336685 Show fit	0.01	ENSRNOT00000025853	Bap1 Links NCBI RGD Ensembl Show fit	Brca1 associated protein 1
chr4_+_66165845 Show fit	0.00	ENSRNOT00000064175	Ubn2 Links NCBI RGD Ensembl Show fit	ubinuclein 2
chr1_+_79911516 Show fit	0.00	ENSRNOT00000019075	Irf2bp1 Links NCBI RGD Ensembl Show fit	interferon regulatory factor 2 binding protein 1
chr1_-_220165678 Show fit	0.00	ENSRNOT00000026915	Bbs1 Links NCBI RGD Ensembl Show fit	Bardet-Biedl syndrome 1
chr3_+_101156212 Show fit	0.00	ENSRNOT00000065333	Ccdc34 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 34
chr1_-_255557055 Show fit	0.00	ENSRNOT00000033780	Fgfbp3 Links NCBI RGD Ensembl Show fit	fibroblast growth factor binding protein 3
chr14_+_82093837 Show fit	0.00	ENSRNOT00000021593	Nelfa Links NCBI RGD Ensembl Show fit	negative elongation factor complex member A
chr20_-_6500523 Show fit	0.00	ENSRNOT00000000629	Cpne5 Links NCBI RGD Ensembl Show fit	copine 5
chr1_+_265904566 Show fit	0.00	ENSRNOT00000086041 ENSRNOT00000036156	Gbf1 Links NCBI RGD Ensembl Show fit	golgi brefeldin A resistant guanine nucleotide exchange factor 1
chr9_-_114619711 Show fit	0.00	ENSRNOT00000050012	Mtcl1 Links NCBI RGD Ensembl Show fit	microtubule crosslinking factor 1
chr13_-_79801112 Show fit	0.00	ENSRNOT00000087323 ENSRNOT00000036483	Suco Links NCBI RGD Ensembl Show fit	SUN domain containing ossification factor
chr18_+_55797198 Show fit	0.00	ENSRNOT00000026334 ENSRNOT00000026394	Dctn4 Links NCBI RGD Ensembl Show fit	dynactin subunit 4
chr7_-_70552897 Show fit	0.00	ENSRNOT00000080594	Kif5a Links NCBI RGD Ensembl Show fit	kinesin family member 5A
chr10_-_85684138 Show fit	0.00	ENSRNOT00000017989	Pip4k2b Links NCBI RGD Ensembl Show fit	phosphatidylinositol-5-phosphate 4-kinase type 2 beta

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0060136	embryonic process involved in female pregnancy(GO:0060136)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0035976	AP1 complex(GO:0035976)