GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Hlf Links NCBI RGD Ensembl	ENSRNOG00000002456	HLF, PAR bZIP transcription factor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hlf	rn6_v1_chr10_-_77918191_77918191	0.17	7.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_-_184188911 Show fit	0.33	ENSRNOT00000055124 ENSRNOT00000014948	Calca Links NCBI RGD Ensembl Show fit	calcitonin-related polypeptide alpha
chr15_-_47442664 Show fit	0.26	ENSRNOT00000072994	Prss55 Links NCBI RGD Ensembl Show fit	protease, serine, 55
chr12_-_35979193 Show fit	0.22	ENSRNOT00000071104	Tmem132b Links NCBI RGD Ensembl Show fit	transmembrane protein 132B
chr5_-_168123395 Show fit	0.22	ENSRNOT00000024932	Per3 Links NCBI RGD Ensembl Show fit	period circadian clock 3
chr15_+_87722221 Show fit	0.21	ENSRNOT00000082688	Scel Links NCBI RGD Ensembl Show fit	sciellin
chr11_-_27080701 Show fit	0.21	ENSRNOT00000002180	Ltn1 Links NCBI RGD Ensembl Show fit	listerin E3 ubiquitin protein ligase 1
chrX_-_10218583 Show fit	0.20	ENSRNOT00000013382	Nyx Links NCBI RGD Ensembl Show fit	nyctalopin
chr10_+_57239993 Show fit	0.20	ENSRNOT00000067919	LOC687707 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC687707
chr7_+_2435553 Show fit	0.19	ENSRNOT00000065593	Prim1 Links NCBI RGD Ensembl Show fit	primase (DNA) subunit 1
chr17_+_11683862 Show fit	0.19	ENSRNOT00000024766	Msx2 Links NCBI RGD Ensembl Show fit	msh homeobox 2
chrX_+_33884499 Show fit	0.19	ENSRNOT00000090041	Reps2 Links NCBI RGD Ensembl Show fit	RALBP1 associated Eps domain containing protein 2
chr6_+_43743702 Show fit	0.18	ENSRNOT00000082570	Grhl1 Links NCBI RGD Ensembl Show fit	grainyhead-like transcription factor 1
chr4_-_118472179 Show fit	0.17	ENSRNOT00000023856	Mxd1 Links NCBI RGD Ensembl Show fit	max dimerization protein 1
chr2_+_196594303 Show fit	0.17	ENSRNOT00000064442 ENSRNOT00000044738	Arnt Links NCBI RGD Ensembl Show fit	aryl hydrocarbon receptor nuclear translocator
chr6_+_144156175 Show fit	0.16	ENSRNOT00000006582	Esyt2 Links NCBI RGD Ensembl Show fit	extended synaptotagmin 2
chr2_+_165805144 Show fit	0.15	ENSRNOT00000073716	Rabif Links NCBI RGD Ensembl Show fit	RAB interacting factor
chr15_+_40665041 Show fit	0.15	ENSRNOT00000018300	Amer2 Links NCBI RGD Ensembl Show fit	APC membrane recruitment protein 2
chr13_+_74456487 Show fit	0.15	ENSRNOT00000065801	Angptl1 Links NCBI RGD Ensembl Show fit	angiopoietin-like 1
chr8_-_36764422 Show fit	0.15	ENSRNOT00000017330	Hyls1 Links NCBI RGD Ensembl Show fit	HYLS1, centriolar and ciliogenesis associated
chr12_+_4737817 Show fit	0.15	ENSRNOT00000035992	AABR07035107.1 Links NCBI RGD Ensembl Show fit
chr18_-_36513317 Show fit	0.15	ENSRNOT00000025453	Plac8l1 Links NCBI RGD Ensembl Show fit	PLAC8-like 1
chr1_-_61872975 Show fit	0.14	ENSRNOT00000078809	AABR07001910.1 Links NCBI RGD Ensembl Show fit
chr9_+_73529612 Show fit	0.14	ENSRNOT00000032430	Unc80 Links NCBI RGD Ensembl Show fit	unc-80 homolog, NALCN activator
chr5_-_7941822 Show fit	0.14	ENSRNOT00000079917	Prex2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr10_-_66602987 Show fit	0.14	ENSRNOT00000017949	Wsb1 Links NCBI RGD Ensembl Show fit	WD repeat and SOCS box-containing 1
chr10_-_16752205 Show fit	0.13	ENSRNOT00000079462	Crebrf Links NCBI RGD Ensembl Show fit	CREB3 regulatory factor
chrX_-_29648359 Show fit	0.13	ENSRNOT00000086721 ENSRNOT00000006777	Gpm6b Links NCBI RGD Ensembl Show fit	glycoprotein m6b
chr4_-_161743847 Show fit	0.13	ENSRNOT00000064174 ENSRNOT00000084173 ENSRNOT00000064215	Itfg2 Links NCBI RGD Ensembl Show fit	integrin alpha FG-GAP repeat containing 2
chr10_-_35187416 Show fit	0.13	ENSRNOT00000084509	Cnot6 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 6
chr2_-_220838905 Show fit	0.13	ENSRNOT00000078914	AABR07013065.1 Links NCBI RGD Ensembl Show fit
chr3_+_177310753 Show fit	0.13	ENSRNOT00000031448	Myt1 Links NCBI RGD Ensembl Show fit	myelin transcription factor 1
chr2_-_247988462 Show fit	0.13	ENSRNOT00000022387	Pdlim5 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 5
chr11_+_62584959 Show fit	0.12	ENSRNOT00000071065	Gramd1c Links NCBI RGD Ensembl Show fit	GRAM domain containing 1C
chr8_+_49354115 Show fit	0.12	ENSRNOT00000032837	Mpzl3 Links NCBI RGD Ensembl Show fit	myelin protein zero-like 3
chr12_-_5490935 Show fit	0.12	ENSRNOT00000050885	Zfp958 Links NCBI RGD Ensembl Show fit	zinc finger protein 958
chrX_+_15113878 Show fit	0.12	ENSRNOT00000007464	Wdr13 Links NCBI RGD Ensembl Show fit	WD repeat domain 13
chr16_+_54291251 Show fit	0.12	ENSRNOT00000079006	Mtus1 Links NCBI RGD Ensembl Show fit	microtubule associated tumor suppressor 1
chr1_+_28454966 Show fit	0.12	ENSRNOT00000078841 ENSRNOT00000030327	Tpd52l1 Links NCBI RGD Ensembl Show fit	tumor protein D52-like 1
chr1_+_15834779 Show fit	0.12	ENSRNOT00000079069 ENSRNOT00000083012	Bclaf1 Links NCBI RGD Ensembl Show fit	BCL2-associated transcription factor 1
chr7_-_59587382 Show fit	0.11	ENSRNOT00000091427 ENSRNOT00000066396	Cnot2 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 2
chr12_+_8725517 Show fit	0.11	ENSRNOT00000001243	Slc46a3 Links NCBI RGD Ensembl Show fit	solute carrier family 46, member 3
chr3_+_95715193 Show fit	0.11	ENSRNOT00000089525	Pax6 Links NCBI RGD Ensembl Show fit	paired box 6
chr7_+_63922879 Show fit	0.11	ENSRNOT00000043581	RGD1565498 Links NCBI RGD Ensembl Show fit	similar to Hypothetical protein LOC270802
chr6_-_41870046 Show fit	0.11	ENSRNOT00000005863	Lpin1 Links NCBI RGD Ensembl Show fit	lipin 1
chr12_-_29743705 Show fit	0.11	ENSRNOT00000001185	Caln1 Links NCBI RGD Ensembl Show fit	calneuron 1
chr12_+_38368693 Show fit	0.11	ENSRNOT00000083261	Clip1 Links NCBI RGD Ensembl Show fit	CAP-GLY domain containing linker protein 1
chr18_+_40596166 Show fit	0.11	ENSRNOT00000087984	Eif1a Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 1A
chr10_-_47453442 Show fit	0.10	ENSRNOT00000050061	Usp22 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 22
chr6_+_28515025 Show fit	0.10	ENSRNOT00000088033 ENSRNOT00000005317 ENSRNOT00000081141	Dnajc27 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C27
chr11_+_64882288 Show fit	0.10	ENSRNOT00000077727	Pla1a Links NCBI RGD Ensembl Show fit	phospholipase A1 member A
chr6_+_99883959 Show fit	0.10	ENSRNOT00000010588	Fntb Links NCBI RGD Ensembl Show fit	farnesyltransferase, CAAX box, beta
chr4_-_22307453 Show fit	0.10	ENSRNOT00000047126	Abcb1a Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily B member 1A
chr18_+_30562178 Show fit	0.10	ENSRNOT00000040998	LOC108348771 Links NCBI RGD Ensembl Show fit	protocadherin beta-16-like
chr8_+_52753011 Show fit	0.10	ENSRNOT00000047264	Nxpe1 Links NCBI RGD Ensembl Show fit	neurexophilin and PC-esterase domain family, member 1
chr10_+_106869401 Show fit	0.10	ENSRNOT00000074369	Tmem235 Links NCBI RGD Ensembl Show fit	transmembrane protein 235
chr20_-_32501722 Show fit	0.10	ENSRNOT00000000448	Zufsp Links NCBI RGD Ensembl Show fit	zinc finger with UFM1-specific peptidase domain
chr2_+_187990242 Show fit	0.10	ENSRNOT00000092819	Arhgef2 Links NCBI RGD Ensembl Show fit	Rho/Rac guanine nucleotide exchange factor 2
chr6_-_102472926 Show fit	0.10	ENSRNOT00000079351	Zfyve26 Links NCBI RGD Ensembl Show fit	zinc finger FYVE-type containing 26
chr13_+_44475970 Show fit	0.10	ENSRNOT00000024602 ENSRNOT00000091645	Ccnt2 Links NCBI RGD Ensembl Show fit	cyclin T2
chr11_-_1836897 Show fit	0.09	ENSRNOT00000050533	Zfp654 Links NCBI RGD Ensembl Show fit	zinc finger protein 654
chr17_-_15566332 Show fit	0.09	ENSRNOT00000093743	Ecm2 Links NCBI RGD Ensembl Show fit	extracellular matrix protein 2
chr1_-_247985497 Show fit	0.09	ENSRNOT00000078998	Ranbp6 Links NCBI RGD Ensembl Show fit	RAN binding protein 6
chr7_+_66742987 Show fit	0.09	ENSRNOT00000045130	Mon2 Links NCBI RGD Ensembl Show fit	MON2 homolog, regulator of endosome-to-Golgi trafficking
chr1_-_70235091 Show fit	0.09	ENSRNOT00000075745	Apeg3 Links NCBI RGD Ensembl Show fit	antisense paternally expressed gene 3
chr18_+_29966245 Show fit	0.09	ENSRNOT00000074028	Pcdha4 Links NCBI RGD Ensembl Show fit	protocadherin alpha 4
chr8_+_116804451 Show fit	0.09	ENSRNOT00000041402	Ip6k1 Links NCBI RGD Ensembl Show fit	inositol hexakisphosphate kinase 1
chr6_+_64252970 Show fit	0.09	ENSRNOT00000093700	Pnpla8 Links NCBI RGD Ensembl Show fit	patatin-like phospholipase domain containing 8
chr1_+_217345545 Show fit	0.09	ENSRNOT00000071741	Shank2 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 2
chr18_+_14471213 Show fit	0.09	ENSRNOT00000045224	Dtna Links NCBI RGD Ensembl Show fit	dystrobrevin, alpha
chr4_-_68597586 Show fit	0.09	ENSRNOT00000015921	RGD1563986 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA E330009J07 gene
chr1_+_127604197 Show fit	0.09	ENSRNOT00000018463	Lins1 Links NCBI RGD Ensembl Show fit	lines homolog 1
chr13_-_78957183 Show fit	0.09	ENSRNOT00000076954 ENSRNOT00000003851	Klhl20 Links NCBI RGD Ensembl Show fit	kelch-like family member 20
chr8_+_69127708 Show fit	0.09	ENSRNOT00000013490	Snapc5 Links NCBI RGD Ensembl Show fit	small nuclear RNA activating complex, polypeptide 5
chr1_-_56683731 Show fit	0.08	ENSRNOT00000014552	Thbs2 Links NCBI RGD Ensembl Show fit	thrombospondin 2
chr17_+_85382116 Show fit	0.08	ENSRNOT00000002513	Spag6 Links NCBI RGD Ensembl Show fit	sperm associated antigen 6
chr5_-_117440254 Show fit	0.08	ENSRNOT00000066139	Kank4 Links NCBI RGD Ensembl Show fit	KN motif and ankyrin repeat domains 4
chr11_+_17538063 Show fit	0.08	ENSRNOT00000031889 ENSRNOT00000090878	Chodl Links NCBI RGD Ensembl Show fit	chondrolectin
chr2_+_189629297 Show fit	0.08	ENSRNOT00000049810	Dennd4b Links NCBI RGD Ensembl Show fit	DENN domain containing 4B
chr2_-_53300404 Show fit	0.08	ENSRNOT00000088876	Ghr Links NCBI RGD Ensembl Show fit	growth hormone receptor
chr10_-_6870011 Show fit	0.08	ENSRNOT00000003439	RGD1309748 Links NCBI RGD Ensembl Show fit	similar to CG4768-PA
chr4_-_85915099 Show fit	0.08	ENSRNOT00000016182	Neurod6 Links NCBI RGD Ensembl Show fit	neuronal differentiation 6
chr14_+_17228856 Show fit	0.08	ENSRNOT00000003082	Cxcl9 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 9
chrX_+_15064594 Show fit	0.08	ENSRNOT00000007130	Tbc1d25 Links NCBI RGD Ensembl Show fit	TBC1 domain family, member 25
chr2_-_96668222 Show fit	0.08	ENSRNOT00000016567	Pkia Links NCBI RGD Ensembl Show fit	cAMP-dependent protein kinase inhibitor alpha
chr15_-_2966576 Show fit	0.08	ENSRNOT00000070893 ENSRNOT00000017383	Kat6b Links NCBI RGD Ensembl Show fit	lysine acetyltransferase 6B
chr7_-_117364697 Show fit	0.08	ENSRNOT00000077314	Oplah Links NCBI RGD Ensembl Show fit	5-oxoprolinase (ATP-hydrolysing)
chr3_-_146407252 Show fit	0.08	ENSRNOT00000091310	Apmap Links NCBI RGD Ensembl Show fit	adipocyte plasma membrane associated protein
chr13_-_111972603 Show fit	0.08	ENSRNOT00000007870	Hsd11b1 Links NCBI RGD Ensembl Show fit	hydroxysteroid 11-beta dehydrogenase 1
chr5_+_104394119 Show fit	0.07	ENSRNOT00000093557 ENSRNOT00000093462	Adamtsl1 Links NCBI RGD Ensembl Show fit	ADAMTS-like 1
chrX_+_153064028 Show fit	0.07	ENSRNOT00000079424	Pnma3 Links NCBI RGD Ensembl Show fit	paraneoplastic Ma antigen 3
chr4_+_70572942 Show fit	0.07	ENSRNOT00000051964	AC142181.1 Links NCBI RGD Ensembl Show fit
chr7_-_120874308 Show fit	0.07	ENSRNOT00000078320	Fam227a Links NCBI RGD Ensembl Show fit	family with sequence similarity 227, member A
chr16_+_54332660 Show fit	0.07	ENSRNOT00000037685	Mtus1 Links NCBI RGD Ensembl Show fit	microtubule associated tumor suppressor 1
chr11_-_17119582 Show fit	0.07	ENSRNOT00000087665	RGD1563888 Links NCBI RGD Ensembl Show fit	similar to DNA segment, Chr 16, ERATO Doi 472, expressed
chr5_+_58661049 Show fit	0.07	ENSRNOT00000078274	Unc13b Links NCBI RGD Ensembl Show fit	unc-13 homolog B
chr17_+_7675531 Show fit	0.07	ENSRNOT00000061187	Spock1 Links NCBI RGD Ensembl Show fit	sparc/osteonectin, cwcv and kazal like domains proteoglycan 1
chr6_-_107325345 Show fit	0.07	ENSRNOT00000049481 ENSRNOT00000042594 ENSRNOT00000013026	Numb Links NCBI RGD Ensembl Show fit	NUMB, endocytic adaptor protein
chr8_-_132790778 Show fit	0.07	ENSRNOT00000008255 ENSRNOT00000091431	Lztfl1 Links NCBI RGD Ensembl Show fit	leucine zipper transcription factor-like 1
chr13_-_98078555 Show fit	0.07	ENSRNOT00000078034	Ahctf1 Links NCBI RGD Ensembl Show fit	AT hook containing transcription factor 1
chr4_+_157107469 Show fit	0.07	ENSRNOT00000015678	C1rl Links NCBI RGD Ensembl Show fit	complement C1r subcomponent like
chr1_-_189666440 Show fit	0.07	ENSRNOT00000019167	Dcun1d3 Links NCBI RGD Ensembl Show fit	defective in cullin neddylation 1 domain containing 3
chr19_-_57333433 Show fit	0.07	ENSRNOT00000024917	Agt Links NCBI RGD Ensembl Show fit	angiotensinogen
chr5_+_151181559 Show fit	0.07	ENSRNOT00000085674	Fgr Links NCBI RGD Ensembl Show fit	FGR proto-oncogene, Src family tyrosine kinase
chr20_-_2088389 Show fit	0.07	ENSRNOT00000090910	Znrd1as1 Links NCBI RGD Ensembl Show fit	ZNRD1 antisense RNA 1
chr3_-_112371664 Show fit	0.07	ENSRNOT00000079606 ENSRNOT00000012636	LOC100910478 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing protein 57-like
chr2_+_209661244 Show fit	0.07	ENSRNOT00000091973	AABR07012826.1 Links NCBI RGD Ensembl Show fit
chr3_+_112371677 Show fit	0.07	ENSRNOT00000013316	LOC100912076 Links NCBI RGD Ensembl Show fit	HAUS augmin-like complex subunit 2-like
chr1_+_240355149 Show fit	0.07	ENSRNOT00000018521	Trpm3 Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily M, member 3
chr2_+_3662763 Show fit	0.06	ENSRNOT00000017828	Mctp1 Links NCBI RGD Ensembl Show fit	multiple C2 and transmembrane domain containing 1
chr8_-_61519507 Show fit	0.06	ENSRNOT00000038347	Odf3l1 Links NCBI RGD Ensembl Show fit	outer dense fiber of sperm tails 3-like 1
chr1_-_167308827 Show fit	0.06	ENSRNOT00000027590 ENSRNOT00000027575	Nup98 Links NCBI RGD Ensembl Show fit	nucleoporin 98
chr8_+_44061894 Show fit	0.06	ENSRNOT00000084416	Zfp202 Links NCBI RGD Ensembl Show fit	zinc finger protein 202
chr15_-_76789298 Show fit	0.06	ENSRNOT00000077853	AABR07018857.1 Links NCBI RGD Ensembl Show fit
chr1_+_162768156 Show fit	0.06	ENSRNOT00000049321	Pak1 Links NCBI RGD Ensembl Show fit	p21 (RAC1) activated kinase 1
chr10_-_89700283 Show fit	0.06	ENSRNOT00000028213	Etv4 Links NCBI RGD Ensembl Show fit	ets variant 4
chr18_+_79773608 Show fit	0.06	ENSRNOT00000088484	Zfp516 Links NCBI RGD Ensembl Show fit	zinc finger protein 516
chr1_-_242861767 Show fit	0.06	ENSRNOT00000021185	Cbwd1 Links NCBI RGD Ensembl Show fit	COBW domain containing 1
chr5_+_169213115 Show fit	0.06	ENSRNOT00000013535	Nol9 Links NCBI RGD Ensembl Show fit	nucleolar protein 9
chr1_-_156296161 Show fit	0.06	ENSRNOT00000025653	Crebzf Links NCBI RGD Ensembl Show fit	CREB/ATF bZIP transcription factor
chr18_+_45023932 Show fit	0.06	ENSRNOT00000039379	Fam170a Links NCBI RGD Ensembl Show fit	family with sequence similarity 170, member A
chr2_+_247248407 Show fit	0.06	ENSRNOT00000082287	Unc5c Links NCBI RGD Ensembl Show fit	unc-5 netrin receptor C
chr8_-_39190457 Show fit	0.06	ENSRNOT00000090161	Stt3a Links NCBI RGD Ensembl Show fit	STT3A, catalytic subunit of the oligosaccharyltransferase complex
chr7_+_121311024 Show fit	0.06	ENSRNOT00000092260 ENSRNOT00000023066 ENSRNOT00000081377	Syngr1 Links NCBI RGD Ensembl Show fit	synaptogyrin 1
chr2_-_152824547 Show fit	0.06	ENSRNOT00000019824	Dhx36 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 36
chr1_+_27924825 Show fit	0.06	ENSRNOT00000087830	AABR07000902.1 Links NCBI RGD Ensembl Show fit
chr6_+_101924000 Show fit	0.06	ENSRNOT00000092157	Mpp5 Links NCBI RGD Ensembl Show fit	membrane palmitoylated protein 5
chr14_-_14192048 Show fit	0.06	ENSRNOT00000060868	Bmp2k Links NCBI RGD Ensembl Show fit	BMP2 inducible kinase
chr9_+_67234303 Show fit	0.06	ENSRNOT00000050179	Abi2 Links NCBI RGD Ensembl Show fit	abl-interactor 2
chr19_+_37990374 Show fit	0.06	ENSRNOT00000026827	Dus2 Links NCBI RGD Ensembl Show fit	dihydrouridine synthase 2
chr5_+_120340646 Show fit	0.06	ENSRNOT00000086259 ENSRNOT00000086539	Dnajc6 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C6
chr14_-_34561696 Show fit	0.06	ENSRNOT00000059763	Srd5a3 Links NCBI RGD Ensembl Show fit	steroid 5 alpha-reductase 3
chr4_-_18396035 Show fit	0.06	ENSRNOT00000034692	Sema3a Links NCBI RGD Ensembl Show fit	semaphorin 3A
chr5_-_164679654 Show fit	0.06	ENSRNOT00000035695	LOC100911456 Links NCBI RGD Ensembl Show fit	migration and invasion-inhibitory protein-like
chr13_-_84759098 Show fit	0.06	ENSRNOT00000058683	LOC685351 Links NCBI RGD Ensembl Show fit	similar to flavin containing monooxygenase 5
chr16_+_65256751 Show fit	0.06	ENSRNOT00000092012	AABR07026137.2 Links NCBI RGD Ensembl Show fit
chr9_+_118586179 Show fit	0.06	ENSRNOT00000022351	Dlgap1 Links NCBI RGD Ensembl Show fit	DLG associated protein 1
chr11_+_42259761 Show fit	0.05	ENSRNOT00000047310	Epha6 Links NCBI RGD Ensembl Show fit	Eph receptor A6
chr5_-_50068706 Show fit	0.05	ENSRNOT00000084643	Orc3 Links NCBI RGD Ensembl Show fit	origin recognition complex, subunit 3
chr20_+_10844266 Show fit	0.05	ENSRNOT00000001583	Rrp1b Links NCBI RGD Ensembl Show fit	ribosomal RNA processing 1B
chr2_+_252771017 Show fit	0.05	ENSRNOT00000075452 ENSRNOT00000055318	Ttll7 Links NCBI RGD Ensembl Show fit	tubulin tyrosine ligase like 7
chr13_-_98078946 Show fit	0.05	ENSRNOT00000035875	Ahctf1 Links NCBI RGD Ensembl Show fit	AT hook containing transcription factor 1
chrX_+_158978755 Show fit	0.05	ENSRNOT00000066809	Slc9a6 Links NCBI RGD Ensembl Show fit	solute carrier family 9 member A6
chr10_-_89699836 Show fit	0.05	ENSRNOT00000084311	Etv4 Links NCBI RGD Ensembl Show fit	ets variant 4
chr10_-_90030639 Show fit	0.05	ENSRNOT00000090456	Mpp2 Links NCBI RGD Ensembl Show fit	membrane palmitoylated protein 2
chr2_-_164684985 Show fit	0.05	ENSRNOT00000057504	Rarres1 Links NCBI RGD Ensembl Show fit	retinoic acid receptor responder 1
chr8_+_99636749 Show fit	0.05	ENSRNOT00000086524	Plscr1 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 1
chr1_-_247088012 Show fit	0.05	ENSRNOT00000020464	Spata6l Links NCBI RGD Ensembl Show fit	spermatogenesis associated 6-like
chr3_+_176989672 Show fit	0.05	ENSRNOT00000020373	Tpd52l2 Links NCBI RGD Ensembl Show fit	tumor protein D52-like 2
chr2_-_43067956 Show fit	0.05	ENSRNOT00000090616	Gpbp1 Links NCBI RGD Ensembl Show fit	GC-rich promoter binding protein 1
chrX_+_137197396 Show fit	0.05	ENSRNOT00000082227	RGD1566225 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1700001F22
chr2_-_30340103 Show fit	0.05	ENSRNOT00000024023 ENSRNOT00000067722	Bdp1 Links NCBI RGD Ensembl Show fit	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
chr18_-_77322690 Show fit	0.05	ENSRNOT00000058382	Nfatc1 Links NCBI RGD Ensembl Show fit	nuclear factor of activated T-cells 1
chr20_+_22728208 Show fit	0.05	ENSRNOT00000000794	LOC100363472 Links NCBI RGD Ensembl Show fit	nuclear receptor-binding factor 2-like
chr19_+_15195565 Show fit	0.05	ENSRNOT00000090865 ENSRNOT00000078874	Ces1d Links NCBI RGD Ensembl Show fit	carboxylesterase 1D
chr18_-_74198369 Show fit	0.05	ENSRNOT00000073597	LOC108348136 Links NCBI RGD Ensembl Show fit	HAUS augmin-like complex subunit 1
chr5_-_128446725 Show fit	0.05	ENSRNOT00000011272	Btf3l4 Links NCBI RGD Ensembl Show fit	basic transcription factor 3-like 4
chr7_-_59547174 Show fit	0.05	ENSRNOT00000085836	Cnot2 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 2
chr11_+_61761613 Show fit	0.05	ENSRNOT00000089340 ENSRNOT00000091598	Qtrt2 Links NCBI RGD Ensembl Show fit	queuine tRNA-ribosyltransferase accessory subunit 2
chr2_-_1561464 Show fit	0.05	ENSRNOT00000062055 ENSRNOT00000062054 ENSRNOT00000062052	Cast Links NCBI RGD Ensembl Show fit	calpastatin
chr1_-_209641123 Show fit	0.05	ENSRNOT00000021702	Ebf3 Links NCBI RGD Ensembl Show fit	early B-cell factor 3
chr4_+_152430509 Show fit	0.05	ENSRNOT00000076062	Rad52 Links NCBI RGD Ensembl Show fit	RAD52 homolog, DNA repair protein
chr1_+_227592635 Show fit	0.05	ENSRNOT00000072135	Ms4a4a Links NCBI RGD Ensembl Show fit	membrane-spanning 4-domains, subfamily A, member 4A
chr10_-_89084885 Show fit	0.05	ENSRNOT00000027452	Plekhh3 Links NCBI RGD Ensembl Show fit	pleckstrin homology, MyTH4 and FERM domain containing H3
chr3_-_164964702 Show fit	0.05	ENSRNOT00000014595	Adnp Links NCBI RGD Ensembl Show fit	activity-dependent neuroprotector homeobox
chr2_+_188052236 Show fit	0.05	ENSRNOT00000027385	RGD1565775 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2810403A07
chr10_-_87954055 Show fit	0.04	ENSRNOT00000018048	Krt34 Links NCBI RGD Ensembl Show fit	keratin 34
chr3_+_124515978 Show fit	0.04	ENSRNOT00000028881	Prnp Links NCBI RGD Ensembl Show fit	prion protein
chr10_-_78156477 Show fit	0.04	ENSRNOT00000083009	Stxbp4 Links NCBI RGD Ensembl Show fit	syntaxin binding protein 4
chr9_+_114022137 Show fit	0.04	ENSRNOT00000007657	Map3k7 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase kinase 7
chr12_+_38965063 Show fit	0.04	ENSRNOT00000074936	Morn3 Links NCBI RGD Ensembl Show fit	MORN repeat containing 3
chr20_+_5933303 Show fit	0.04	ENSRNOT00000000617	Mapk14 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase 14
chr1_+_101603222 Show fit	0.04	ENSRNOT00000033278	Izumo1 Links NCBI RGD Ensembl Show fit	izumo sperm-egg fusion 1
chr7_-_142180794 Show fit	0.04	ENSRNOT00000037447	Tfcp2 Links NCBI RGD Ensembl Show fit	transcription factor CP2
chr7_-_139063752 Show fit	0.04	ENSRNOT00000072309	LOC102551901 Links NCBI RGD Ensembl Show fit	protein lifeguard 2-like
chr2_+_40554146 Show fit	0.04	ENSRNOT00000015138	Pde4d Links NCBI RGD Ensembl Show fit	phosphodiesterase 4D
chr11_-_79703736 Show fit	0.04	ENSRNOT00000044279	Lpp Links NCBI RGD Ensembl Show fit	LIM domain containing preferred translocation partner in lipoma
chr5_+_76386836 Show fit	0.04	ENSRNOT00000088872 ENSRNOT00000021110	Ugcg Links NCBI RGD Ensembl Show fit	UDP-glucose ceramide glucosyltransferase
chr1_+_30863217 Show fit	0.04	ENSRNOT00000015421	Rnf146 Links NCBI RGD Ensembl Show fit	ring finger protein 146
chr3_-_112385528 Show fit	0.04	ENSRNOT00000049756	Lrrc57 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 57
chr2_+_251200686 Show fit	0.04	ENSRNOT00000019210	Col24a1 Links NCBI RGD Ensembl Show fit	collagen type XXIV alpha 1 chain
chr7_-_2941122 Show fit	0.04	ENSRNOT00000082107	Esyt1 Links NCBI RGD Ensembl Show fit	extended synaptotagmin 1
chr6_-_125723732 Show fit	0.04	ENSRNOT00000084815	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chr10_+_45559578 Show fit	0.04	ENSRNOT00000004011	RGD1304587 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2310033P09
chr4_-_168517177 Show fit	0.04	ENSRNOT00000009151	Dusp16 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 16
chr17_-_76188979 Show fit	0.04	ENSRNOT00000092442	Upf2 Links NCBI RGD Ensembl Show fit	UPF2 regulator of nonsense transcripts homolog (yeast)
chr5_-_100970043 Show fit	0.04	ENSRNOT00000013950	Zdhhc21 Links NCBI RGD Ensembl Show fit	zinc finger, DHHC-type containing 21
chr2_-_192671059 Show fit	0.04	ENSRNOT00000012174	Sprr1a Links NCBI RGD Ensembl Show fit	small proline-rich protein 1A
chr18_-_1828606 Show fit	0.04	ENSRNOT00000033312	Esco1 Links NCBI RGD Ensembl Show fit	establishment of sister chromatid cohesion N-acetyltransferase 1
chr7_-_142180997 Show fit	0.04	ENSRNOT00000087632	Tfcp2 Links NCBI RGD Ensembl Show fit	transcription factor CP2
chr7_+_130308532 Show fit	0.04	ENSRNOT00000011941	Miox Links NCBI RGD Ensembl Show fit	myo-inositol oxygenase
chr18_-_28871849 Show fit	0.04	ENSRNOT00000025902	Nrg2 Links NCBI RGD Ensembl Show fit	neuregulin 2
chr5_+_148577332 Show fit	0.04	ENSRNOT00000016325	Snrnp40 Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein U5 subunit 40
chr2_-_57935334 Show fit	0.04	ENSRNOT00000022319 ENSRNOT00000085599 ENSRNOT00000077790 ENSRNOT00000035821	Slc1a3 Links NCBI RGD Ensembl Show fit	solute carrier family 1 member 3
chr13_+_105684420 Show fit	0.03	ENSRNOT00000040543	Gpatch2 Links NCBI RGD Ensembl Show fit	G patch domain containing 2
chr2_-_22096949 Show fit	0.03	ENSRNOT00000089325	Zfyve16 Links NCBI RGD Ensembl Show fit	zinc finger FYVE-type containing 16
chr17_+_507377 Show fit	0.03	ENSRNOT00000023638	Npepo Links NCBI RGD Ensembl Show fit	aminopeptidase O
chr1_-_62558033 Show fit	0.03	ENSRNOT00000015520	Zfp40 Links NCBI RGD Ensembl Show fit	zinc finger protein 40
chr3_+_148635775 Show fit	0.03	ENSRNOT00000067261	Tm9sf4 Links NCBI RGD Ensembl Show fit	transmembrane 9 superfamily member 4
chr8_+_114866768 Show fit	0.03	ENSRNOT00000076731	Wdr82 Links NCBI RGD Ensembl Show fit	WD repeat domain 82
chr9_+_73378057 Show fit	0.03	ENSRNOT00000043627 ENSRNOT00000045766 ENSRNOT00000092445 ENSRNOT00000037974	Map2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 2

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0001983	baroreceptor response to increased systemic arterial blood pressure(GO:0001983)
0.1	0.2	GO:0035880	embryonic nail plate morphogenesis(GO:0035880)
0.0	0.1	GO:1902211	regulation of prolactin signaling pathway(GO:1902211)
0.0	0.1	GO:0003322	pancreatic A cell development(GO:0003322) forebrain-midbrain boundary formation(GO:0021905) somatic motor neuron fate commitment(GO:0021917) regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment(GO:0021918) sensory neuron migration(GO:1904937)
0.0	0.3	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0	0.1	GO:0018343	protein farnesylation(GO:0018343)
0.0	0.1	GO:0019086	late viral transcription(GO:0019086)
0.0	0.1	GO:0051581	negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612)
0.0	0.1	GO:1905231	carbohydrate export(GO:0033231) daunorubicin transport(GO:0043215) response to borneol(GO:1905230) cellular response to borneol(GO:1905231) response to codeine(GO:1905233) response to quercetin(GO:1905235) drug transport across blood-brain barrier(GO:1990962) establishment of blood-retinal barrier(GO:1990963)
0.0	0.1	GO:0006713	glucocorticoid catabolic process(GO:0006713)
0.0	0.1	GO:0021849	neuroblast division in subventricular zone(GO:0021849)
0.0	0.1	GO:0071802	negative regulation of podosome assembly(GO:0071802)
0.0	0.2	GO:0006269	DNA replication, synthesis of RNA primer(GO:0006269)
0.0	0.1	GO:0046338	phosphatidylethanolamine catabolic process(GO:0046338)
0.0	0.1	GO:1903598	ovarian follicle rupture(GO:0001543) angiotensin mediated vasoconstriction involved in regulation of systemic arterial blood pressure(GO:0001998) regulation of renal output by angiotensin(GO:0002019) angiotensin-mediated drinking behavior(GO:0003051) regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331) response to muscle activity involved in regulation of muscle adaptation(GO:0014873) positive regulation of gap junction assembly(GO:1903598)
0.0	0.1	GO:0019626	short-chain fatty acid catabolic process(GO:0019626)
0.0	0.1	GO:0044861	protein transport into plasma membrane raft(GO:0044861)
0.0	0.1	GO:0000973	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0	0.1	GO:0000448	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000448)
0.0	0.1	GO:0090669	telomerase RNA stabilization(GO:0090669)
0.0	0.1	GO:0006384	transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0	0.1	GO:0006267	pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0	0.1	GO:1903564	regulation of protein localization to cilium(GO:1903564)
0.0	0.2	GO:1904262	negative regulation of TORC1 signaling(GO:1904262)
0.0	0.1	GO:0060762	regulation of branching involved in mammary gland duct morphogenesis(GO:0060762)
0.0	0.2	GO:0002934	desmosome organization(GO:0002934)
0.0	0.1	GO:0061534	gamma-aminobutyric acid secretion, neurotransmission(GO:0061534)
0.0	0.1	GO:0006642	triglyceride mobilization(GO:0006642)
0.0	0.1	GO:0072318	clathrin coat disassembly(GO:0072318)
0.0	0.1	GO:0016095	polyprenol catabolic process(GO:0016095)
0.0	0.1	GO:0021888	cerebral cortex tangential migration using cell-axon interactions(GO:0021824) gonadotrophin-releasing hormone neuronal migration to the hypothalamus(GO:0021828) hypothalamic tangential migration using cell-axon interactions(GO:0021856) hypothalamus gonadotrophin-releasing hormone neuron differentiation(GO:0021886) hypothalamus gonadotrophin-releasing hormone neuron development(GO:0021888) facioacoustic ganglion development(GO:1903375)
0.0	0.0	GO:0086024	adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)
0.0	0.1	GO:0006610	ribosomal protein import into nucleus(GO:0006610)
0.0	0.2	GO:0043619	regulation of transcription from RNA polymerase II promoter in response to oxidative stress(GO:0043619)
0.0	0.2	GO:0098880	maintenance of postsynaptic specialization structure(GO:0098880) maintenance of postsynaptic density structure(GO:0099562)
0.0	0.0	GO:0002337	B-1a B cell differentiation(GO:0002337)
0.0	0.1	GO:0032483	regulation of Rab protein signal transduction(GO:0032483)
0.0	0.1	GO:0060539	diaphragm development(GO:0060539)
0.0	0.0	GO:0014835	myoblast differentiation involved in skeletal muscle regeneration(GO:0014835)
0.0	0.0	GO:0098972	dendritic transport of mitochondrion(GO:0098939) anterograde dendritic transport of mitochondrion(GO:0098972)
0.0	0.1	GO:0010808	positive regulation of synaptic vesicle priming(GO:0010808) presynaptic dense core granule exocytosis(GO:0099525)
0.0	0.1	GO:0071787	endoplasmic reticulum tubular network assembly(GO:0071787)
0.0	0.1	GO:0033564	anterior/posterior axon guidance(GO:0033564)
0.0	0.1	GO:0051292	nuclear pore complex assembly(GO:0051292)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0030015	CCR4-NOT core complex(GO:0030015)
0.0	0.2	GO:0005658	alpha DNA polymerase:primase complex(GO:0005658)
0.0	0.1	GO:0036387	nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.0	0.2	GO:0031080	nuclear pore outer ring(GO:0031080)
0.0	0.1	GO:0070195	growth hormone receptor complex(GO:0070195)
0.0	0.2	GO:0044232	organelle membrane contact site(GO:0044232)
0.0	0.1	GO:0044354	pinosome(GO:0044352) macropinosome(GO:0044354)
0.0	0.0	GO:0044317	rod spherule(GO:0044317)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0004874	aryl hydrocarbon receptor activity(GO:0004874)
0.0	0.2	GO:0001226	RNA polymerase II transcription corepressor binding(GO:0001226)
0.0	0.1	GO:0052723	inositol hexakisphosphate 1-kinase activity(GO:0052723) inositol hexakisphosphate 3-kinase activity(GO:0052724)
0.0	0.1	GO:0019961	interferon binding(GO:0019961)
0.0	0.2	GO:0003896	DNA primase activity(GO:0003896)
0.0	0.1	GO:0017168	5-oxoprolinase (ATP-hydrolyzing) activity(GO:0017168)
0.0	0.1	GO:0003845	11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
0.0	0.1	GO:0090555	phosphatidylethanolamine-translocating ATPase activity(GO:0090555)
0.0	0.1	GO:0004903	growth hormone receptor activity(GO:0004903)
0.0	0.1	GO:0070052	collagen V binding(GO:0070052)
0.0	0.1	GO:0008970	phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
0.0	0.1	GO:0008318	protein prenyltransferase activity(GO:0008318)
0.0	0.1	GO:0004771	sterol esterase activity(GO:0004771)
0.0	0.1	GO:0051731	polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0	0.1	GO:0048248	CXCR3 chemokine receptor binding(GO:0048248)
0.0	0.1	GO:0047751	3-oxo-5-alpha-steroid 4-dehydrogenase activity(GO:0003865) cholestenone 5-alpha-reductase activity(GO:0047751)
0.0	0.1	GO:0097322	7SK snRNA binding(GO:0097322)
0.0	0.2	GO:0098879	structural constituent of postsynaptic specialization(GO:0098879) structural constituent of postsynaptic density(GO:0098919)
0.0	0.1	GO:0003680	AT DNA binding(GO:0003680)
0.0	0.0	GO:0000995	transcription factor activity, core RNA polymerase III binding(GO:0000995) TFIIIC-class transcription factor binding(GO:0001156)
0.0	0.1	GO:0005042	netrin receptor activity(GO:0005042)
0.0	0.0	GO:0001224	RNA polymerase II transcription cofactor binding(GO:0001224) RNA polymerase II transcription coactivator binding(GO:0001225)
0.0	0.1	GO:0008429	phosphatidylethanolamine binding(GO:0008429)
0.0	0.0	GO:0016422	mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity(GO:0016422)
0.0	0.0	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0	0.1	GO:0047499	calcium-independent phospholipase A2 activity(GO:0047499)
0.0	0.0	GO:1903135	cupric ion binding(GO:1903135)
0.0	0.1	GO:0034988	Fc-gamma receptor I complex binding(GO:0034988)
0.0	0.1	GO:0070739	protein-glutamic acid ligase activity(GO:0070739)
0.0	0.2	GO:0030676	Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.0	0.1	GO:0004064	arylesterase activity(GO:0004064)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	REACTOME DEADENYLATION OF MRNA	Genes involved in Deadenylation of mRNA
0.0	0.2	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.0	0.1	REACTOME SYNTHESIS OF PE	Genes involved in Synthesis of PE