GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Hoxd1 Links NCBI RGD Ensembl	ENSRNOG00000001572	homeo box D1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hoxd1	rn6_v1_chr3_+_61685619_61685619	-0.54	3.4e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr16_+_84465656 Show fit	0.30	ENSRNOT00000043188	LOC689713 Links NCBI RGD Ensembl Show fit	LRRGT00175
chr6_-_3355339 Show fit	0.27	ENSRNOT00000084602	Map4k3 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 3
chr5_-_168734296 Show fit	0.23	ENSRNOT00000066120	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr12_-_35979193 Show fit	0.23	ENSRNOT00000071104	Tmem132b Links NCBI RGD Ensembl Show fit	transmembrane protein 132B
chr1_+_141767940 Show fit	0.22	ENSRNOT00000064034	Zfp710 Links NCBI RGD Ensembl Show fit	zinc finger protein 710
chr9_+_73378057 Show fit	0.20	ENSRNOT00000043627 ENSRNOT00000045766 ENSRNOT00000092445 ENSRNOT00000037974	Map2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 2
chr3_+_56125924 Show fit	0.19	ENSRNOT00000011380	Ubr3 Links NCBI RGD Ensembl Show fit	ubiquitin protein ligase E3 component n-recognin 3
chr14_+_42015347 Show fit	0.19	ENSRNOT00000044017	Atp8a1 Links NCBI RGD Ensembl Show fit	ATPase phospholipid transporting 8A1
chr16_-_10802512 Show fit	0.18	ENSRNOT00000079554	Bmpr1a Links NCBI RGD Ensembl Show fit	bone morphogenetic protein receptor type 1A
chr12_-_45801842 Show fit	0.18	ENSRNOT00000078837	AABR07036513.1 Links NCBI RGD Ensembl Show fit
chr13_+_91054974 Show fit	0.18	ENSRNOT00000091089	Crp Links NCBI RGD Ensembl Show fit	C-reactive protein
chr18_-_55891710 Show fit	0.17	ENSRNOT00000064686	Synpo Links NCBI RGD Ensembl Show fit	synaptopodin
chr14_-_84751886 Show fit	0.16	ENSRNOT00000078838	Mtmr3 Links NCBI RGD Ensembl Show fit	myotubularin related protein 3
chr10_-_10881844 Show fit	0.16	ENSRNOT00000087118 ENSRNOT00000004416	Mgrn1 Links NCBI RGD Ensembl Show fit	mahogunin ring finger 1
chr2_-_33025271 Show fit	0.16	ENSRNOT00000074941	NEWGENE_1310139 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase family member 4
chr20_+_6211420 Show fit	0.16	ENSRNOT00000000624	Kctd20 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 20
chr16_+_7035068 Show fit	0.16	ENSRNOT00000024296	Nek4 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 4
chr7_-_120770435 Show fit	0.16	ENSRNOT00000077000	Ddx17 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 17
chr5_+_155934490 Show fit	0.16	ENSRNOT00000077933	LOC100911993 Links NCBI RGD Ensembl Show fit	ubiquitin carboxyl-terminal hydrolase 48-like
chr9_+_10013854 Show fit	0.15	ENSRNOT00000077653 ENSRNOT00000072033	Khsrp Links NCBI RGD Ensembl Show fit	KH-type splicing regulatory protein
chr15_-_55209342 Show fit	0.15	ENSRNOT00000021752	Rb1 Links NCBI RGD Ensembl Show fit	RB transcriptional corepressor 1
chr8_-_21492801 Show fit	0.15	ENSRNOT00000077465	Zfp426 Links NCBI RGD Ensembl Show fit	zinc finger protein 426
chr3_-_120076788 Show fit	0.15	ENSRNOT00000047158	Kcnip3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 3
chr8_+_40009691 Show fit	0.15	ENSRNOT00000042679	Vsig2 Links NCBI RGD Ensembl Show fit	V-set and immunoglobulin domain containing 2
chr1_+_99505677 Show fit	0.15	ENSRNOT00000024645	Zfp719 Links NCBI RGD Ensembl Show fit	zinc finger protein 719
chr6_+_104291071 Show fit	0.13	ENSRNOT00000006798	Slc39a9 Links NCBI RGD Ensembl Show fit	solute carrier family 39, member 9
chr17_-_87826421 Show fit	0.13	ENSRNOT00000068156	Arhgap21 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 21
chr4_-_22424862 Show fit	0.13	ENSRNOT00000082359	Abcb1a Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily B member 1A
chr4_+_88694583 Show fit	0.13	ENSRNOT00000009202	Ppm1k Links NCBI RGD Ensembl Show fit	protein phosphatase, Mg2+/Mn2+ dependent, 1K
chr9_+_67234303 Show fit	0.13	ENSRNOT00000050179	Abi2 Links NCBI RGD Ensembl Show fit	abl-interactor 2
chr15_-_54528480 Show fit	0.13	ENSRNOT00000066888	Fndc3a Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 3a
chr1_+_140998240 Show fit	0.12	ENSRNOT00000023506 ENSRNOT00000090897	Abhd2 Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 2
chr17_-_78812111 Show fit	0.12	ENSRNOT00000021506	Dclre1c Links NCBI RGD Ensembl Show fit	DNA cross-link repair 1C
chr5_+_135574172 Show fit	0.12	ENSRNOT00000023416	Tesk2 Links NCBI RGD Ensembl Show fit	testis-specific kinase 2
chr13_-_83457888 Show fit	0.12	ENSRNOT00000076289 ENSRNOT00000004065	Sft2d2 Links NCBI RGD Ensembl Show fit	SFT2 domain containing 2
chr1_+_217345545 Show fit	0.12	ENSRNOT00000071741	Shank2 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 2
chr2_+_195996521 Show fit	0.12	ENSRNOT00000082849	Pogz Links NCBI RGD Ensembl Show fit	pogo transposable element with ZNF domain
chr18_-_43945273 Show fit	0.12	ENSRNOT00000088900	Dtwd2 Links NCBI RGD Ensembl Show fit	DTW domain containing 2
chr17_-_89923423 Show fit	0.12	ENSRNOT00000076964	Acbd5 Links NCBI RGD Ensembl Show fit	acyl-CoA binding domain containing 5
chr7_-_59547174 Show fit	0.12	ENSRNOT00000085836	Cnot2 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 2
chr15_-_93765498 Show fit	0.11	ENSRNOT00000093297	Mycbp2 Links NCBI RGD Ensembl Show fit	MYC binding protein 2, E3 ubiquitin protein ligase
chr10_+_61685645 Show fit	0.11	ENSRNOT00000003933	Mnt Links NCBI RGD Ensembl Show fit	MAX network transcriptional repressor
chrX_-_69218526 Show fit	0.11	ENSRNOT00000092321 ENSRNOT00000074071 ENSRNOT00000092571	Pja1 Links NCBI RGD Ensembl Show fit	praja ring finger ubiquitin ligase 1
chr1_-_215033460 Show fit	0.11	ENSRNOT00000044565	Dusp8 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 8
chr9_+_16003058 Show fit	0.11	ENSRNOT00000081621 ENSRNOT00000021158	Ubr2 Links NCBI RGD Ensembl Show fit	ubiquitin protein ligase E3 component n-recognin 2
chr14_-_86387606 Show fit	0.11	ENSRNOT00000089384 ENSRNOT00000006642	Ddx56 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 56
chr4_-_126644895 Show fit	0.10	ENSRNOT00000017384 ENSRNOT00000072624	Lrig1 Links NCBI RGD Ensembl Show fit	leucine-rich repeats and immunoglobulin-like domains 1
chr5_-_133959447 Show fit	0.10	ENSRNOT00000011985	Cyp4x1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 4, subfamily x, polypeptide 1
chr12_+_6403940 Show fit	0.10	ENSRNOT00000083484	B3glct Links NCBI RGD Ensembl Show fit	beta 3-glucosyltransferase
chr9_+_66888393 Show fit	0.10	ENSRNOT00000023536	Carf Links NCBI RGD Ensembl Show fit	calcium responsive transcription factor
chr5_-_147412705 Show fit	0.10	ENSRNOT00000010688	RGD1561149 Links NCBI RGD Ensembl Show fit	similar to mKIAA1522 protein
chr8_-_82533689 Show fit	0.10	ENSRNOT00000014124	Tmod2 Links NCBI RGD Ensembl Show fit	tropomodulin 2
chr1_-_64147251 Show fit	0.10	ENSRNOT00000088502	Cnot3 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 3
chr16_+_59564419 Show fit	0.09	ENSRNOT00000083434	Lonrf1 Links NCBI RGD Ensembl Show fit	LON peptidase N-terminal domain and ring finger 1
chr5_-_12526962 Show fit	0.09	ENSRNOT00000092104	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr20_-_13994794 Show fit	0.09	ENSRNOT00000093466	Ggt5 Links NCBI RGD Ensembl Show fit	gamma-glutamyltransferase 5
chr19_+_45938915 Show fit	0.09	ENSRNOT00000065508	Mon1b Links NCBI RGD Ensembl Show fit	MON1 homolog B, secretory trafficking associated
chr2_-_149432106 Show fit	0.09	ENSRNOT00000051027	P2ry13 Links NCBI RGD Ensembl Show fit	purinergic receptor P2Y13
chr1_-_241046249 Show fit	0.08	ENSRNOT00000067796 ENSRNOT00000081866	Smc5 Links NCBI RGD Ensembl Show fit	structural maintenance of chromosomes 5
chr3_+_148654668 Show fit	0.08	ENSRNOT00000081370	Tm9sf4 Links NCBI RGD Ensembl Show fit	transmembrane 9 superfamily member 4
chr1_+_80293566 Show fit	0.08	ENSRNOT00000024246	Ercc2 Links NCBI RGD Ensembl Show fit	ERCC excision repair 2, TFIIH core complex helicase subunit
chr5_-_164648328 Show fit	0.08	ENSRNOT00000090811	Zfp933 Links NCBI RGD Ensembl Show fit	zinc finger protein 933
chr9_+_13446896 Show fit	0.08	ENSRNOT00000088651	Daam2 Links NCBI RGD Ensembl Show fit	dishevelled associated activator of morphogenesis 2
chr4_+_157524423 Show fit	0.08	ENSRNOT00000036654	Zfp384 Links NCBI RGD Ensembl Show fit	zinc finger protein 384
chr11_-_51202703 Show fit	0.08	ENSRNOT00000002719 ENSRNOT00000077220	Cblb Links NCBI RGD Ensembl Show fit	Cbl proto-oncogene B
chr10_+_103206014 Show fit	0.07	ENSRNOT00000004081	Ttyh2 Links NCBI RGD Ensembl Show fit	tweety family member 2
chr10_-_52290657 Show fit	0.07	ENSRNOT00000005293	Map2k4 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase 4
chr16_+_7035241 Show fit	0.07	ENSRNOT00000084977	Nek4 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 4
chr7_+_2752680 Show fit	0.07	ENSRNOT00000033726	Cs Links NCBI RGD Ensembl Show fit	citrate synthase
chr1_-_100926335 Show fit	0.07	ENSRNOT00000020304	Ap2a1 Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 2, alpha 1 subunit
chr18_+_63203063 Show fit	0.07	ENSRNOT00000024144	Prelid3a Links NCBI RGD Ensembl Show fit	PRELI domain containing 3A
chr7_-_114590119 Show fit	0.07	ENSRNOT00000079599	Ptk2 Links NCBI RGD Ensembl Show fit	protein tyrosine kinase 2
chr4_+_146455332 Show fit	0.07	ENSRNOT00000009775	Hrh1 Links NCBI RGD Ensembl Show fit	histamine receptor H 1
chr12_-_52658275 Show fit	0.07	ENSRNOT00000041981	Zfp605 Links NCBI RGD Ensembl Show fit	zinc finger protein 605
chr2_-_35870578 Show fit	0.07	ENSRNOT00000066069	Rnf180 Links NCBI RGD Ensembl Show fit	ring finger protein 180
chr6_+_18880737 Show fit	0.07	ENSRNOT00000003432	Alkbh8 Links NCBI RGD Ensembl Show fit	alkB homolog 8, tRNA methyltransferase
chr6_-_108660063 Show fit	0.07	ENSRNOT00000006240	Arel1 Links NCBI RGD Ensembl Show fit	apoptosis resistant E3 ubiquitin protein ligase 1
chr2_+_257626383 Show fit	0.07	ENSRNOT00000080993	Zzz3 Links NCBI RGD Ensembl Show fit	zinc finger, ZZ-type containing 3
chr1_+_62133816 Show fit	0.07	ENSRNOT00000034746	LOC102555377 Links NCBI RGD Ensembl Show fit	zinc finger protein 182-like
chr3_+_56056925 Show fit	0.07	ENSRNOT00000088351 ENSRNOT00000010508	Klhl23 Links NCBI RGD Ensembl Show fit	kelch-like family member 23
chr1_+_15834779 Show fit	0.07	ENSRNOT00000079069 ENSRNOT00000083012	Bclaf1 Links NCBI RGD Ensembl Show fit	BCL2-associated transcription factor 1
chr3_-_66335869 Show fit	0.07	ENSRNOT00000079781 ENSRNOT00000043238 ENSRNOT00000073412 ENSRNOT00000057878 ENSRNOT00000079212	Cerkl Links NCBI RGD Ensembl Show fit	ceramide kinase-like
chr8_-_8524643 Show fit	0.06	ENSRNOT00000009418	Cntn5 Links NCBI RGD Ensembl Show fit	contactin 5
chr5_-_7941822 Show fit	0.06	ENSRNOT00000079917	Prex2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1_+_1545134 Show fit	0.06	ENSRNOT00000044523	AABR07000156.1 Links NCBI RGD Ensembl Show fit
chr17_+_77601877 Show fit	0.06	ENSRNOT00000091554 ENSRNOT00000024872	Prpf18 Links NCBI RGD Ensembl Show fit	pre-mRNA processing factor 18
chr15_-_88670349 Show fit	0.06	ENSRNOT00000012881	Rnf219 Links NCBI RGD Ensembl Show fit	ring finger protein 219
chr10_+_35870232 Show fit	0.06	ENSRNOT00000078505	Hnrnph1 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein H1
chrX_-_65102344 Show fit	0.06	ENSRNOT00000016042 ENSRNOT00000075875	Las1l Links NCBI RGD Ensembl Show fit	LAS1-like, ribosome biogenesis factor
chr1_-_38538987 Show fit	0.06	ENSRNOT00000090406 ENSRNOT00000071275	LOC102551340 Links NCBI RGD Ensembl Show fit	zinc finger protein 728-like
chr1_+_253221812 Show fit	0.06	ENSRNOT00000085880 ENSRNOT00000054753	Kif20b Links NCBI RGD Ensembl Show fit	kinesin family member 20B
chr14_+_45982244 Show fit	0.06	ENSRNOT00000076881 ENSRNOT00000002984	Rell1 Links NCBI RGD Ensembl Show fit	RELT-like 1
chr4_-_176606382 Show fit	0.06	ENSRNOT00000065576	Recql Links NCBI RGD Ensembl Show fit	RecQ like helicase
chr12_-_24775891 Show fit	0.06	ENSRNOT00000074851	Wbscr27 Links NCBI RGD Ensembl Show fit	Williams Beuren syndrome chromosome region 27
chrX_-_159841072 Show fit	0.06	ENSRNOT00000001158	Arhgef6 Links NCBI RGD Ensembl Show fit	Rac/Cdc42 guanine nucleotide exchange factor 6
chr4_-_62860446 Show fit	0.05	ENSRNOT00000015752	Fam180a Links NCBI RGD Ensembl Show fit	family with sequence similarity 180, member A
chr15_+_42808897 Show fit	0.05	ENSRNOT00000023475	Chrna2 Links NCBI RGD Ensembl Show fit	cholinergic receptor nicotinic alpha 2 subunit
chr3_-_90751055 Show fit	0.05	ENSRNOT00000040741	LOC499843 Links NCBI RGD Ensembl Show fit	LRRGT00091
chr1_-_78180216 Show fit	0.05	ENSRNOT00000071576	C5ar2 Links NCBI RGD Ensembl Show fit	complement component 5a receptor 2
chr2_+_122877286 Show fit	0.05	ENSRNOT00000033080	Arse Links NCBI RGD Ensembl Show fit	arylsulfatase E
chr18_+_30840868 Show fit	0.05	ENSRNOT00000027026	Pcdhga5 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily A, 5
chr4_-_55011415 Show fit	0.05	ENSRNOT00000056996	Grm8 Links NCBI RGD Ensembl Show fit	glutamate metabotropic receptor 8
chr2_+_86996497 Show fit	0.05	ENSRNOT00000042058	Zfp455 Links NCBI RGD Ensembl Show fit	zinc finger protein 455
chr6_+_80108655 Show fit	0.05	ENSRNOT00000006137	Gemin2 Links NCBI RGD Ensembl Show fit	gem (nuclear organelle) associated protein 2
chr3_-_15278645 Show fit	0.05	ENSRNOT00000032204	Ttll11 Links NCBI RGD Ensembl Show fit	tubulin tyrosine ligase like11
chr11_+_47146308 Show fit	0.05	ENSRNOT00000002191	Cep97 Links NCBI RGD Ensembl Show fit	centrosomal protein 97
chr2_-_210088949 Show fit	0.05	ENSRNOT00000070994	Rbm15 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 15
chr10_-_87286387 Show fit	0.05	ENSRNOT00000044206	Krt28 Links NCBI RGD Ensembl Show fit	keratin 28
chr10_-_65502936 Show fit	0.05	ENSRNOT00000089615	Supt6h Links NCBI RGD Ensembl Show fit	SPT6 homolog, histone chaperone
chr1_+_101603222 Show fit	0.05	ENSRNOT00000033278	Izumo1 Links NCBI RGD Ensembl Show fit	izumo sperm-egg fusion 1
chr2_+_220432037 Show fit	0.05	ENSRNOT00000021988	Frrs1 Links NCBI RGD Ensembl Show fit	ferric-chelate reductase 1
chr7_-_83670356 Show fit	0.05	ENSRNOT00000005584	Sybu Links NCBI RGD Ensembl Show fit	syntabulin
chr13_-_89545182 Show fit	0.05	ENSRNOT00000078402	Pcp4l1 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4-like 1
chr2_+_66940057 Show fit	0.05	ENSRNOT00000043050	Cdh9 Links NCBI RGD Ensembl Show fit	cadherin 9
chr3_-_133122691 Show fit	0.05	ENSRNOT00000083637	Tasp1 Links NCBI RGD Ensembl Show fit	taspase 1
chr12_-_46493203 Show fit	0.04	ENSRNOT00000057036	Cit Links NCBI RGD Ensembl Show fit	citron rho-interacting serine/threonine kinase
chrX_+_6273733 Show fit	0.04	ENSRNOT00000074275	Ndp Links NCBI RGD Ensembl Show fit	NDP, norrin cystine knot growth factor
chr1_-_261179790 Show fit	0.04	ENSRNOT00000074420 ENSRNOT00000072073	Exosc1 Links NCBI RGD Ensembl Show fit	exosome component 1
chr1_-_252808380 Show fit	0.04	ENSRNOT00000025856	Ch25h Links NCBI RGD Ensembl Show fit	cholesterol 25-hydroxylase
chr1_+_260093641 Show fit	0.04	ENSRNOT00000019521	Ccnj Links NCBI RGD Ensembl Show fit	cyclin J
chr7_+_15422479 Show fit	0.04	ENSRNOT00000066520	Zfp563 Links NCBI RGD Ensembl Show fit	zinc finger protein 563
chr6_+_104291340 Show fit	0.04	ENSRNOT00000089313	Slc39a9 Links NCBI RGD Ensembl Show fit	solute carrier family 39, member 9
chr1_-_255976425 Show fit	0.04	ENSRNOT00000085303	Ide Links NCBI RGD Ensembl Show fit	insulin degrading enzyme
chr8_+_32188617 Show fit	0.04	ENSRNOT00000081145	Zbtb44 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 44
chr4_+_2053712 Show fit	0.04	ENSRNOT00000045086	Rnf32 Links NCBI RGD Ensembl Show fit	ring finger protein 32
chr2_+_248398917 Show fit	0.04	ENSRNOT00000045855	Gbp1 Links NCBI RGD Ensembl Show fit	guanylate binding protein 1
chr11_+_68633160 Show fit	0.04	ENSRNOT00000063795	Sec22a Links NCBI RGD Ensembl Show fit	SEC22 homolog A, vesicle trafficking protein
chr6_-_108076186 Show fit	0.04	ENSRNOT00000014814	Fam161b Links NCBI RGD Ensembl Show fit	family with sequence similarity 161, member B
chr1_+_224998172 Show fit	0.04	ENSRNOT00000026321	Zbtb3 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 3
chr5_+_6373583 Show fit	0.04	ENSRNOT00000084749	AABR07046778.1 Links NCBI RGD Ensembl Show fit
chr6_+_8284878 Show fit	0.04	ENSRNOT00000009581	Slc3a1 Links NCBI RGD Ensembl Show fit	solute carrier family 3 member 1
chr13_-_76049363 Show fit	0.04	ENSRNOT00000075865 ENSRNOT00000007455	Brinp2 Links NCBI RGD Ensembl Show fit	BMP/retinoic acid inducible neural specific 2
chr4_+_31229913 Show fit	0.04	ENSRNOT00000077134 ENSRNOT00000087897	Samd9l Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 9-like
chrM_+_9870 Show fit	0.04	ENSRNOT00000044582	Mt-nd4l Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH 4L dehydrogenase
chr5_-_50068706 Show fit	0.04	ENSRNOT00000084643	Orc3 Links NCBI RGD Ensembl Show fit	origin recognition complex, subunit 3
chr3_+_128155069 Show fit	0.04	ENSRNOT00000051184 ENSRNOT00000006389	Plcb1 Links NCBI RGD Ensembl Show fit	phospholipase C beta 1
chr5_-_171262119 Show fit	0.03	ENSRNOT00000032825	Dffb Links NCBI RGD Ensembl Show fit	DNA fragmentation factor subunit beta
chr10_-_78219793 Show fit	0.03	ENSRNOT00000003369	Tom1l1 Links NCBI RGD Ensembl Show fit	target of myb1 like 1 membrane trafficking protein
chr1_+_261180007 Show fit	0.03	ENSRNOT00000072181	Zdhhc16 Links NCBI RGD Ensembl Show fit	zinc finger, DHHC-type containing 16
chr14_+_34446616 Show fit	0.03	ENSRNOT00000002976	Clock Links NCBI RGD Ensembl Show fit	clock circadian regulator
chr15_+_87722221 Show fit	0.03	ENSRNOT00000082688	Scel Links NCBI RGD Ensembl Show fit	sciellin
chr10_-_110274768 Show fit	0.03	ENSRNOT00000054931	Sectm1a Links NCBI RGD Ensembl Show fit	secreted and transmembrane 1A
chrX_+_88298266 Show fit	0.03	ENSRNOT00000041508	AABR07039936.1 Links NCBI RGD Ensembl Show fit
chr1_+_101554642 Show fit	0.03	ENSRNOT00000028474	Bcat2 Links NCBI RGD Ensembl Show fit	branched chain amino acid transaminase 2
chr16_-_32439421 Show fit	0.03	ENSRNOT00000043100	Nek1 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 1
chr11_-_82893845 Show fit	0.03	ENSRNOT00000075306	LOC100912571 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4 gamma 1-like
chr1_-_67390141 Show fit	0.03	ENSRNOT00000025808	Sbk1 Links NCBI RGD Ensembl Show fit	SH3 domain binding kinase 1
chr17_-_27279260 Show fit	0.03	ENSRNOT00000018508	Snrnp48 Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein U11/U12 subunit 48
chr18_-_26656879 Show fit	0.03	ENSRNOT00000086729	Epb41l4a Links NCBI RGD Ensembl Show fit	erythrocyte membrane protein band 4.1 like 4A
chr3_+_21764377 Show fit	0.03	ENSRNOT00000063938	Gpr21 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 21
chr8_+_103938520 Show fit	0.03	ENSRNOT00000067835	Gk5 Links NCBI RGD Ensembl Show fit	glycerol kinase 5 (putative)
chr16_+_6048004 Show fit	0.03	ENSRNOT00000020750	Actr8 Links NCBI RGD Ensembl Show fit	ARP8 actin-related protein 8 homolog
chr3_+_129885826 Show fit	0.03	ENSRNOT00000009743	Slx4ip Links NCBI RGD Ensembl Show fit	SLX4 interacting protein
chrX_+_84064427 Show fit	0.03	ENSRNOT00000046364	Zfp711 Links NCBI RGD Ensembl Show fit	zinc finger protein 711
chr11_-_43022565 Show fit	0.03	ENSRNOT00000002285	Riox2 Links NCBI RGD Ensembl Show fit	ribosomal oxygenase 2
chr1_-_197801634 Show fit	0.03	ENSRNOT00000090200	Nfatc2ip Links NCBI RGD Ensembl Show fit	nuclear factor of activated T-cells 2 interacting protein
chr4_+_147832136 Show fit	0.03	ENSRNOT00000064603	Rho Links NCBI RGD Ensembl Show fit	rhodopsin
chr7_+_2635743 Show fit	0.03	ENSRNOT00000004223	Mip Links NCBI RGD Ensembl Show fit	major intrinsic protein of lens fiber
chr7_+_83564563 Show fit	0.02	ENSRNOT00000005705	Ebag9 Links NCBI RGD Ensembl Show fit	estrogen receptor binding site associated, antigen, 9
chr1_+_255579474 Show fit	0.02	ENSRNOT00000024465	Btaf1 Links NCBI RGD Ensembl Show fit	B-TFIID TATA-box binding protein associated factor 1
chr17_-_84247038 Show fit	0.02	ENSRNOT00000068553	Nebl Links NCBI RGD Ensembl Show fit	nebulette
chr4_-_88684415 Show fit	0.02	ENSRNOT00000009001	LOC500148 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S7 (S8)
chr1_-_198450047 Show fit	0.02	ENSRNOT00000027360	Mvp Links NCBI RGD Ensembl Show fit	major vault protein
chr2_+_86996798 Show fit	0.02	ENSRNOT00000070821	Zfp455 Links NCBI RGD Ensembl Show fit	zinc finger protein 455
chr1_-_67065797 Show fit	0.02	ENSRNOT00000048152	Vom1r46 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 46
chr20_+_3155652 Show fit	0.02	ENSRNOT00000042882	RT1-S2 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus S2
chr12_+_19328957 Show fit	0.02	ENSRNOT00000033288	Cnpy4 Links NCBI RGD Ensembl Show fit	canopy FGF signaling regulator 4
chr2_+_93669765 Show fit	0.02	ENSRNOT00000045438	Slc10a5 Links NCBI RGD Ensembl Show fit	solute carrier family 10, member 5
chr11_-_69316848 Show fit	0.02	ENSRNOT00000033420	Ccdc14 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 14
chr3_-_57607683 Show fit	0.02	ENSRNOT00000093222 ENSRNOT00000058524	Mettl8 Links NCBI RGD Ensembl Show fit	methyltransferase like 8
chr15_+_33885106 Show fit	0.02	ENSRNOT00000024483	Dhrs2 Links NCBI RGD Ensembl Show fit	dehydrogenase/reductase 2
chr1_+_68436917 Show fit	0.02	ENSRNOT00000088586	LOC108348118 Links NCBI RGD Ensembl Show fit	leucyl-cystinyl aminopeptidase
chr10_-_34242985 Show fit	0.02	ENSRNOT00000046438	RGD1559575 Links NCBI RGD Ensembl Show fit	similar to novel protein
chr5_+_187312 Show fit	0.02	ENSRNOT00000030857	LOC102557117 Links NCBI RGD Ensembl Show fit	zinc finger protein 120-like
chr5_-_144996431 Show fit	0.02	ENSRNOT00000016992	Zmym4 Links NCBI RGD Ensembl Show fit	zinc finger MYM-type containing 4
chr8_+_117297670 Show fit	0.02	ENSRNOT00000082628	Qars Links NCBI RGD Ensembl Show fit	glutaminyl-tRNA synthetase
chr16_+_23553647 Show fit	0.02	ENSRNOT00000041994	Psd3 Links NCBI RGD Ensembl Show fit	pleckstrin and Sec7 domain containing 3
chr2_-_57935334 Show fit	0.02	ENSRNOT00000022319 ENSRNOT00000085599 ENSRNOT00000077790 ENSRNOT00000035821	Slc1a3 Links NCBI RGD Ensembl Show fit	solute carrier family 1 member 3
chr12_-_45116665 Show fit	0.02	ENSRNOT00000089043	Taok3 Links NCBI RGD Ensembl Show fit	TAO kinase 3
chr2_+_119112513 Show fit	0.02	ENSRNOT00000015460	Actl6a Links NCBI RGD Ensembl Show fit	actin-like 6A
chr1_+_68436593 Show fit	0.02	ENSRNOT00000080325	LOC108348118 Links NCBI RGD Ensembl Show fit	leucyl-cystinyl aminopeptidase
chr7_+_91384187 Show fit	0.02	ENSRNOT00000005828	Utp23 Links NCBI RGD Ensembl Show fit	UTP23, small subunit processome component
chr16_+_71738718 Show fit	0.02	ENSRNOT00000022097	Plekha2 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A2
chr5_+_58995249 Show fit	0.02	ENSRNOT00000023411	Ccdc107 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 107
chr16_-_19308842 Show fit	0.02	ENSRNOT00000019556	Fam32a Links NCBI RGD Ensembl Show fit	family with sequence similarity 32, member A
chr6_-_111417813 Show fit	0.01	ENSRNOT00000016324 ENSRNOT00000085458	Sptlc2 Links NCBI RGD Ensembl Show fit	serine palmitoyltransferase, long chain base subunit 2
chr19_+_39229754 Show fit	0.01	ENSRNOT00000050612	Vps4a Links NCBI RGD Ensembl Show fit	vacuolar protein sorting 4 homolog A
chr8_+_107495366 Show fit	0.01	ENSRNOT00000056590	Cep70 Links NCBI RGD Ensembl Show fit	centrosomal protein 70
chr10_+_1834518 Show fit	0.01	ENSRNOT00000061709	Gm1758 Links NCBI RGD Ensembl Show fit	predicted gene 1758
chr1_-_233145924 Show fit	0.01	ENSRNOT00000018763 ENSRNOT00000082442	Psat1 Links NCBI RGD Ensembl Show fit	phosphoserine aminotransferase 1
chr10_+_35870682 Show fit	0.01	ENSRNOT00000067188	Hnrnph1 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein H1
chr2_-_60657712 Show fit	0.01	ENSRNOT00000040348	Rai14 Links NCBI RGD Ensembl Show fit	retinoic acid induced 14
chr10_-_65437143 Show fit	0.01	ENSRNOT00000017264	Nek8 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 8
chr8_-_96547568 Show fit	0.01	ENSRNOT00000078343	RGD1560775 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4930579C12 gene
chr2_+_195684210 Show fit	0.01	ENSRNOT00000028316	mrpl9 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L9
chr9_-_30844199 Show fit	0.01	ENSRNOT00000017169	Col19a1 Links NCBI RGD Ensembl Show fit	collagen type XIX alpha 1 chain
chr13_-_90405591 Show fit	0.01	ENSRNOT00000006849	Vangl2 Links NCBI RGD Ensembl Show fit	VANGL planar cell polarity protein 2
chr2_+_195651930 Show fit	0.01	ENSRNOT00000028299	Tdrkh Links NCBI RGD Ensembl Show fit	tudor and KH domain containing
chr8_-_83421612 Show fit	0.01	ENSRNOT00000015824	Hcrtr2 Links NCBI RGD Ensembl Show fit	hypocretin receptor 2
chr16_+_74785281 Show fit	0.01	ENSRNOT00000064316 ENSRNOT00000017106 ENSRNOT00000090646	Nek3 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 3

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0061092	regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092)
0.1	0.2	GO:0048378	lateral mesodermal cell fate commitment(GO:0048372) lateral mesodermal cell fate specification(GO:0048377) regulation of lateral mesodermal cell fate specification(GO:0048378) mesendoderm development(GO:0048382) regulation of cardiac ventricle development(GO:1904412)
0.1	0.2	GO:0034085	establishment of sister chromatid cohesion(GO:0034085) cohesin loading(GO:0071921) regulation of cohesin loading(GO:0071922) regulation of hepatocyte apoptotic process(GO:1903943) negative regulation of hepatocyte apoptotic process(GO:1903944)
0.0	0.2	GO:0098886	modification of dendritic spine(GO:0098886)
0.0	0.2	GO:0032929	negative regulation of superoxide anion generation(GO:0032929)
0.0	0.1	GO:0032474	otolith morphogenesis(GO:0032474)
0.0	0.1	GO:0051684	maintenance of Golgi location(GO:0051684)
0.0	0.1	GO:1905231	carbohydrate export(GO:0033231) daunorubicin transport(GO:0043215) response to borneol(GO:1905230) cellular response to borneol(GO:1905231) response to codeine(GO:1905233) response to quercetin(GO:1905235) drug transport across blood-brain barrier(GO:1990962) establishment of blood-retinal barrier(GO:1990963)
0.0	0.1	GO:1901750	leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750)
0.0	0.1	GO:0019086	late viral transcription(GO:0019086)
0.0	0.1	GO:0030242	pexophagy(GO:0030242)
0.0	0.1	GO:0032289	central nervous system myelin formation(GO:0032289)
0.0	0.1	GO:1900126	negative regulation of hyaluronan biosynthetic process(GO:1900126)
0.0	0.1	GO:0007199	G-protein coupled receptor signaling pathway coupled to cGMP nucleotide second messenger(GO:0007199)
0.0	0.1	GO:0000350	generation of catalytic spliceosome for second transesterification step(GO:0000350)
0.0	0.2	GO:0043951	negative regulation of cAMP-mediated signaling(GO:0043951)
0.0	0.1	GO:1902412	regulation of mitotic cytokinesis(GO:1902412)
0.0	0.2	GO:0001302	replicative cell aging(GO:0001302)
0.0	0.1	GO:0072709	cellular response to sorbitol(GO:0072709)
0.0	0.1	GO:2000601	positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0	0.1	GO:0090024	negative regulation of granulocyte chemotaxis(GO:0071623) negative regulation of neutrophil chemotaxis(GO:0090024)
0.0	0.1	GO:0007172	signal complex assembly(GO:0007172)
0.0	0.2	GO:2000628	regulation of miRNA metabolic process(GO:2000628)
0.0	0.3	GO:0000185	activation of MAPKKK activity(GO:0000185)
0.0	0.1	GO:0031848	protection from non-homologous end joining at telomere(GO:0031848)
0.0	0.2	GO:0042048	olfactory behavior(GO:0042048)
0.0	0.1	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.0	0.1	GO:0034184	positive regulation of maintenance of mitotic sister chromatid cohesion(GO:0034184)
0.0	0.0	GO:1901143	insulin catabolic process(GO:1901143)
0.0	0.1	GO:0071233	cellular response to leucine(GO:0071233)
0.0	0.1	GO:0051694	pointed-end actin filament capping(GO:0051694)
0.0	0.1	GO:0002669	positive regulation of T cell anergy(GO:0002669) positive regulation of lymphocyte anergy(GO:0002913)
0.0	0.2	GO:0010586	miRNA metabolic process(GO:0010586)
0.0	0.0	GO:0006267	pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0	0.0	GO:0071350	monocyte extravasation(GO:0035696) interleukin-12-mediated signaling pathway(GO:0035722) interleukin-15-mediated signaling pathway(GO:0035723) cellular response to interleukin-12(GO:0071349) cellular response to interleukin-15(GO:0071350)
0.0	0.0	GO:0009099	branched-chain amino acid biosynthetic process(GO:0009082) leucine biosynthetic process(GO:0009098) valine biosynthetic process(GO:0009099)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0097444	spine apparatus(GO:0097444)
0.0	0.2	GO:0030015	CCR4-NOT core complex(GO:0030015)
0.0	0.2	GO:0035189	Rb-E2F complex(GO:0035189)
0.0	0.2	GO:0097442	CA3 pyramidal cell dendrite(GO:0097442)
0.0	0.1	GO:0097524	sperm plasma membrane(GO:0097524)
0.0	0.1	GO:0035061	interchromatin granule(GO:0035061)
0.0	0.1	GO:0031209	SCAR complex(GO:0031209)
0.0	0.1	GO:0070419	nonhomologous end joining complex(GO:0070419)
0.0	0.1	GO:0071817	MMXD complex(GO:0071817)
0.0	0.0	GO:0005656	nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0008349	MAP kinase kinase kinase kinase activity(GO:0008349)
0.0	0.2	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0	0.2	GO:0098821	BMP receptor activity(GO:0098821)
0.0	0.2	GO:0061676	importin-alpha family protein binding(GO:0061676)
0.0	0.1	GO:0001226	RNA polymerase II transcription corepressor binding(GO:0001226)
0.0	0.1	GO:0090555	phosphatidylethanolamine-translocating ATPase activity(GO:0090555)
0.0	0.1	GO:1990050	phosphatidic acid transporter activity(GO:1990050)
0.0	0.1	GO:0001849	complement component C1q binding(GO:0001849)
0.0	0.1	GO:0000386	second spliceosomal transesterification activity(GO:0000386)
0.0	0.1	GO:0070728	leucine binding(GO:0070728)
0.0	0.1	GO:0001847	opsonin receptor activity(GO:0001847)
0.0	0.1	GO:0035312	5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0	0.1	GO:0004969	histamine receptor activity(GO:0004969)
0.0	0.1	GO:0016300	tRNA (uracil) methyltransferase activity(GO:0016300)
0.0	0.0	GO:0000991	transcription factor activity, core RNA polymerase II binding(GO:0000991)
0.0	0.1	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.0	0.1	GO:0001729	ceramide kinase activity(GO:0001729)
0.0	0.1	GO:0001642	group III metabotropic glutamate receptor activity(GO:0001642)
0.0	0.1	GO:0003840	gamma-glutamyltransferase activity(GO:0003840) glutathione hydrolase activity(GO:0036374)
0.0	0.2	GO:0035925	mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.0	0.0	GO:0000293	ferric-chelate reductase activity(GO:0000293)
0.0	0.2	GO:0004012	phospholipid-translocating ATPase activity(GO:0004012)
0.0	0.0	GO:0052654	branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	REACTOME CREATION OF C4 AND C2 ACTIVATORS	Genes involved in Creation of C4 and C2 activators