GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Mnx1 Links NCBI RGD Ensembl	ENSRNOG00000046959	motor neuron and pancreas homeobox 1
Lhx6 Links NCBI RGD Ensembl	ENSRNOG00000005996	LIM homeobox 6
Lmx1a Links NCBI RGD Ensembl	ENSRNOG00000004642	LIM homeobox transcription factor 1 alpha

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Lmx1a	rn6_v1_chr13_+_85918252_85918252	0.78	1.2e-01	Click!
Lhx6	rn6_v1_chr3_-_15433252_15433252	-0.41	5.0e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr12_-_2174131 Show fit	1.99	ENSRNOT00000001313	Pcp2 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 2
chr10_-_88670430 Show fit	1.51	ENSRNOT00000025547	Hcrt Links NCBI RGD Ensembl Show fit	hypocretin neuropeptide precursor
chr2_+_145174876 Show fit	1.17	ENSRNOT00000040631	Mab21l1 Links NCBI RGD Ensembl Show fit	mab-21 like 1
chr4_-_80395502 Show fit	0.60	ENSRNOT00000014437	Npvf Links NCBI RGD Ensembl Show fit	neuropeptide VF precursor
chr5_+_50381244 Show fit	0.52	ENSRNOT00000012385	Cga Links NCBI RGD Ensembl Show fit	glycoprotein hormones, alpha polypeptide
chr7_-_28711761 Show fit	0.47	ENSRNOT00000006249	Parpbp Links NCBI RGD Ensembl Show fit	PARP1 binding protein
chr14_+_4362717 Show fit	0.32	ENSRNOT00000002887	Barhl2 Links NCBI RGD Ensembl Show fit	BarH-like homeobox 2
chr8_+_71914867 Show fit	0.31	ENSRNOT00000023372	Dapk2 Links NCBI RGD Ensembl Show fit	death-associated protein kinase 2
chr12_-_17186679 Show fit	0.30	ENSRNOT00000001730	Uncx Links NCBI RGD Ensembl Show fit	UNC homeobox
chr2_-_185852759 Show fit	0.25	ENSRNOT00000049461	Mab21l2 Links NCBI RGD Ensembl Show fit	mab-21 like 2
chr6_+_8886591 Show fit	0.23	ENSRNOT00000091510 ENSRNOT00000089174	Six3 Links NCBI RGD Ensembl Show fit	SIX homeobox 3
chr3_-_7498555 Show fit	0.22	ENSRNOT00000017725	Barhl1 Links NCBI RGD Ensembl Show fit	BarH-like homeobox 1
chr1_-_173764246 Show fit	0.20	ENSRNOT00000019690 ENSRNOT00000086944	Lmo1 Links NCBI RGD Ensembl Show fit	LIM domain only 1
chr14_+_43694183 Show fit	0.18	ENSRNOT00000046342	RGD1563570 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S23
chr6_-_125723732 Show fit	0.18	ENSRNOT00000084815	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chrX_+_118197217 Show fit	0.18	ENSRNOT00000090922	Htr2c Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 2C
chr17_+_11683862 Show fit	0.17	ENSRNOT00000024766	Msx2 Links NCBI RGD Ensembl Show fit	msh homeobox 2
chr6_+_28382962 Show fit	0.15	ENSRNOT00000016976	Pomc Links NCBI RGD Ensembl Show fit	proopiomelanocortin
chr1_-_124803363 Show fit	0.15	ENSRNOT00000066380	Klf13 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 13
chr12_-_45801842 Show fit	0.14	ENSRNOT00000078837	AABR07036513.1 Links NCBI RGD Ensembl Show fit
chr9_-_82146874 Show fit	0.13	ENSRNOT00000024190	Fev Links NCBI RGD Ensembl Show fit	FEV, ETS transcription factor
chr19_-_49448072 Show fit	0.13	ENSRNOT00000014997	Cmc2 Links NCBI RGD Ensembl Show fit	C-x(9)-C motif containing 2
chr20_+_44680449 Show fit	0.13	ENSRNOT00000000728	Traf3ip2 Links NCBI RGD Ensembl Show fit	Traf3 interacting protein 2
chr4_+_172119331 Show fit	0.12	ENSRNOT00000010579	Mgst1 Links NCBI RGD Ensembl Show fit	microsomal glutathione S-transferase 1
chr8_-_49109981 Show fit	0.11	ENSRNOT00000019933	Ttc36 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 36
chr7_-_58149061 Show fit	0.11	ENSRNOT00000005157	Tph2 Links NCBI RGD Ensembl Show fit	tryptophan hydroxylase 2
chr14_-_115052450 Show fit	0.11	ENSRNOT00000067998	Acyp2 Links NCBI RGD Ensembl Show fit	acylphosphatase 2
chr4_-_180234804 Show fit	0.11	ENSRNOT00000070957	Bhlhe41 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e41
chr2_+_239415046 Show fit	0.10	ENSRNOT00000072196	Cxxc4 Links NCBI RGD Ensembl Show fit	CXXC finger protein 4
chr2_+_80269661 Show fit	0.10	ENSRNOT00000015975	AABR07008940.1 Links NCBI RGD Ensembl Show fit
chrX_-_104932508 Show fit	0.10	ENSRNOT00000075325	Nox1 Links NCBI RGD Ensembl Show fit	NADPH oxidase 1
chr1_-_15374850 Show fit	0.09	ENSRNOT00000016728	Pex7 Links NCBI RGD Ensembl Show fit	peroxisomal biogenesis factor 7
chr7_-_142348232 Show fit	0.09	ENSRNOT00000078848	Galnt6 Links NCBI RGD Ensembl Show fit	polypeptide N-acetylgalactosaminyltransferase 6
chr1_+_105284753 Show fit	0.09	ENSRNOT00000041950	Slc6a5 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 5
chrX_+_136488691 Show fit	0.09	ENSRNOT00000093432	Arhgap36 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 36
chr8_+_117117430 Show fit	0.08	ENSRNOT00000073247	Gpx1 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 1
chr10_-_87232723 Show fit	0.08	ENSRNOT00000015150	Krt25 Links NCBI RGD Ensembl Show fit	keratin 25
chr8_+_57983556 Show fit	0.08	ENSRNOT00000009562	RGD1311251 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4930550C14
chr6_-_125723944 Show fit	0.08	ENSRNOT00000007004	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chr4_-_58250798 Show fit	0.08	ENSRNOT00000048436	Klf14 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 14
chr2_-_88553086 Show fit	0.08	ENSRNOT00000042494	LOC361914 Links NCBI RGD Ensembl Show fit	similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 12
chr15_-_95514259 Show fit	0.08	ENSRNOT00000038433	Slitrk6 Links NCBI RGD Ensembl Show fit	SLIT and NTRK-like family, member 6
chr4_+_6827429 Show fit	0.07	ENSRNOT00000071737	Rheb Links NCBI RGD Ensembl Show fit	Ras homolog enriched in brain
chr8_+_47674321 Show fit	0.07	ENSRNOT00000026170 ENSRNOT00000078776	Trim29 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 29
chr8_+_104106740 Show fit	0.07	ENSRNOT00000015015	Tfdp2 Links NCBI RGD Ensembl Show fit	transcription factor Dp-2
chrX_+_74205842 Show fit	0.07	ENSRNOT00000077003	Chic1 Links NCBI RGD Ensembl Show fit	cysteine-rich hydrophobic domain 1
chr11_-_32550539 Show fit	0.07	ENSRNOT00000002715	Rcan1 Links NCBI RGD Ensembl Show fit	regulator of calcineurin 1
chr11_-_79703736 Show fit	0.06	ENSRNOT00000044279	Lpp Links NCBI RGD Ensembl Show fit	LIM domain containing preferred translocation partner in lipoma
chr4_-_100252755 Show fit	0.06	ENSRNOT00000017301	Vamp8 Links NCBI RGD Ensembl Show fit	vesicle-associated membrane protein 8
chr2_-_196415530 Show fit	0.06	ENSRNOT00000064238	RGD1359334 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ20519
chr8_+_99632803 Show fit	0.06	ENSRNOT00000087190	Plscr1 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 1
chr3_+_5709236 Show fit	0.06	ENSRNOT00000061201 ENSRNOT00000070887	Dbh Links NCBI RGD Ensembl Show fit	dopamine beta-hydroxylase
chr4_+_22898527 Show fit	0.06	ENSRNOT00000072455 ENSRNOT00000076123	Dbf4 Links NCBI RGD Ensembl Show fit	DBF4 zinc finger
chrX_+_33443186 Show fit	0.06	ENSRNOT00000005622	S100g Links NCBI RGD Ensembl Show fit	S100 calcium binding protein G
chr14_+_76732650 Show fit	0.05	ENSRNOT00000088197	Clnk Links NCBI RGD Ensembl Show fit	cytokine-dependent hematopoietic cell linker
chrX_+_74200972 Show fit	0.05	ENSRNOT00000076956	Chic1 Links NCBI RGD Ensembl Show fit	cysteine-rich hydrophobic domain 1
chr11_+_46184871 Show fit	0.05	ENSRNOT00000048417	Tfg Links NCBI RGD Ensembl Show fit	Trk-fused gene
chr15_+_108318664 Show fit	0.05	ENSRNOT00000057469	Ubac2 Links NCBI RGD Ensembl Show fit	UBA domain containing 2
chr13_+_31081804 Show fit	0.05	ENSRNOT00000041413	Cdh7 Links NCBI RGD Ensembl Show fit	cadherin 7
chr1_-_3849080 Show fit	0.05	ENSRNOT00000045301	RGD1560633 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27a
chr1_-_88657845 Show fit	0.05	ENSRNOT00000074211	LOC100912380 Links NCBI RGD Ensembl Show fit	calpain small subunit 1-like
chr5_-_22765429 Show fit	0.05	ENSRNOT00000079432	Asph Links NCBI RGD Ensembl Show fit	aspartate-beta-hydroxylase
chr10_-_88172910 Show fit	0.05	ENSRNOT00000046956	Krt42 Links NCBI RGD Ensembl Show fit	keratin 42
chr3_+_95715193 Show fit	0.05	ENSRNOT00000089525	Pax6 Links NCBI RGD Ensembl Show fit	paired box 6
chr8_+_106449321 Show fit	0.05	ENSRNOT00000018622	Rbp1 Links NCBI RGD Ensembl Show fit	retinol binding protein 1
chr10_-_93675991 Show fit	0.05	ENSRNOT00000090662	March10 Links NCBI RGD Ensembl Show fit	membrane associated ring-CH-type finger 10
chr3_-_148057523 Show fit	0.05	ENSRNOT00000055408	Defb24 Links NCBI RGD Ensembl Show fit	defensin beta 24
chr7_-_145062956 Show fit	0.05	ENSRNOT00000055274	RGD1563200 Links NCBI RGD Ensembl Show fit	similar to CDNA sequence BC048502
chr5_-_115387377 Show fit	0.05	ENSRNOT00000036030 ENSRNOT00000077492	RGD1560146 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC34837
chr1_-_190370499 Show fit	0.05	ENSRNOT00000084389	AABR07005618.1 Links NCBI RGD Ensembl Show fit
chrX_+_6273733 Show fit	0.05	ENSRNOT00000074275	Ndp Links NCBI RGD Ensembl Show fit	NDP, norrin cystine knot growth factor
chr8_-_55491152 Show fit	0.05	ENSRNOT00000014965	LOC100359479 Links NCBI RGD Ensembl Show fit	rCG58364-like
chr6_-_77421286 Show fit	0.04	ENSRNOT00000011453	Nkx2-1 Links NCBI RGD Ensembl Show fit	NK2 homeobox 1
chr13_+_49005405 Show fit	0.04	ENSRNOT00000092560 ENSRNOT00000076457	Lemd1 Links NCBI RGD Ensembl Show fit	LEM domain containing 1
chr5_-_139748489 Show fit	0.04	ENSRNOT00000078741	Nfyc Links NCBI RGD Ensembl Show fit	nuclear transcription factor Y subunit gamma
chr3_+_80072489 Show fit	0.04	ENSRNOT00000057176	Pacsin3 Links NCBI RGD Ensembl Show fit	protein kinase C and casein kinase substrate in neurons 3
chr9_+_25304876 Show fit	0.04	ENSRNOT00000065053	Tfap2d Links NCBI RGD Ensembl Show fit	transcription factor AP-2 delta
chr18_-_26656879 Show fit	0.04	ENSRNOT00000086729	Epb41l4a Links NCBI RGD Ensembl Show fit	erythrocyte membrane protein band 4.1 like 4A
chr10_+_43601689 Show fit	0.04	ENSRNOT00000029238	Mrpl22 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L22
chr7_-_49741540 Show fit	0.04	ENSRNOT00000006523	Myf6 Links NCBI RGD Ensembl Show fit	myogenic factor 6
chr3_-_104018861 Show fit	0.04	ENSRNOT00000008387	Chrm5 Links NCBI RGD Ensembl Show fit	cholinergic receptor, muscarinic 5
chr18_+_32336102 Show fit	0.04	ENSRNOT00000018577	Fgf1 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 1
chr10_+_61640015 Show fit	0.04	ENSRNOT00000092714	Mettl16 Links NCBI RGD Ensembl Show fit	methyltransferase like 16
chr12_+_17253791 Show fit	0.04	ENSRNOT00000083814	Zfand2a Links NCBI RGD Ensembl Show fit	zinc finger AN1-type containing 2A
chr1_+_127802978 Show fit	0.04	ENSRNOT00000055877	Adamts17 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 17
chr9_+_15166118 Show fit	0.04	ENSRNOT00000020432	Mdfi Links NCBI RGD Ensembl Show fit	MyoD family inhibitor
chr6_-_127508452 Show fit	0.04	ENSRNOT00000073709	LOC100909524 Links NCBI RGD Ensembl Show fit	protein Z-dependent protease inhibitor-like
chr15_-_37830131 Show fit	0.04	ENSRNOT00000075861	Eef1akmt1 Links NCBI RGD Ensembl Show fit	eukaryotic translation elongation factor 1 alpha lysine methyltransferase 1
chr3_-_122206671 Show fit	0.04	ENSRNOT00000037576	Pdyn Links NCBI RGD Ensembl Show fit	prodynorphin
chr4_+_33638709 Show fit	0.04	ENSRNOT00000009888 ENSRNOT00000034719 ENSRNOT00000052333	Tac1 Links NCBI RGD Ensembl Show fit	tachykinin, precursor 1
chr2_+_226563050 Show fit	0.04	ENSRNOT00000065111	Bcar3 Links NCBI RGD Ensembl Show fit	breast cancer anti-estrogen resistance 3
chr5_+_187312 Show fit	0.04	ENSRNOT00000030857	LOC102557117 Links NCBI RGD Ensembl Show fit	zinc finger protein 120-like
chr12_-_47142852 Show fit	0.04	ENSRNOT00000001591	Pop5 Links NCBI RGD Ensembl Show fit	POP5 homolog, ribonuclease P/MRP subunit
chr2_-_58534211 Show fit	0.03	ENSRNOT00000089178	Skp2 Links NCBI RGD Ensembl Show fit	S-phase kinase associated protein 2
chr4_+_158088505 Show fit	0.03	ENSRNOT00000026643	Vwf Links NCBI RGD Ensembl Show fit	von Willebrand factor
chr10_+_61685645 Show fit	0.03	ENSRNOT00000003933	Mnt Links NCBI RGD Ensembl Show fit	MAX network transcriptional repressor
chr1_+_185863043 Show fit	0.03	ENSRNOT00000079072	Sox6 Links NCBI RGD Ensembl Show fit	SRY box 6
chrX_-_77559348 Show fit	0.03	ENSRNOT00000047823	Fndc3c1 Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 3C1
chr2_-_170301348 Show fit	0.03	ENSRNOT00000088131	Si Links NCBI RGD Ensembl Show fit	sucrase-isomaltase
chrX_+_156463953 Show fit	0.03	ENSRNOT00000079889	Flna Links NCBI RGD Ensembl Show fit	filamin A
chr7_-_143420027 Show fit	0.03	ENSRNOT00000082863	Krt2 Links NCBI RGD Ensembl Show fit	keratin 2
chrX_-_10413984 Show fit	0.03	ENSRNOT00000039551 ENSRNOT00000091448	Ddx3x Links NCBI RGD Ensembl Show fit	DEAD-box helicase 3, X-linked
chr11_-_62067655 Show fit	0.03	ENSRNOT00000093382	Zbtb20 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 20
chr5_+_165724027 Show fit	0.03	ENSRNOT00000018000	Casz1 Links NCBI RGD Ensembl Show fit	castor zinc finger 1
chr2_+_188478082 Show fit	0.03	ENSRNOT00000085817	Clk2 Links NCBI RGD Ensembl Show fit	CDC-like kinase 2
chr6_-_38007162 Show fit	0.03	ENSRNOT00000044583	AABR07063632.1 Links NCBI RGD Ensembl Show fit
chr14_-_84189266 Show fit	0.03	ENSRNOT00000005934	Tcn2 Links NCBI RGD Ensembl Show fit	transcobalamin 2
chr7_+_38900593 Show fit	0.03	ENSRNOT00000072166	Epyc Links NCBI RGD Ensembl Show fit	epiphycan
chr11_-_87403367 Show fit	0.03	ENSRNOT00000057751	Thap7 Links NCBI RGD Ensembl Show fit	THAP domain containing 7
chr9_+_10941613 Show fit	0.03	ENSRNOT00000070794	Sema6b Links NCBI RGD Ensembl Show fit	semaphorin 6B
chr5_+_153269526 Show fit	0.03	ENSRNOT00000091494	Syf2 Links NCBI RGD Ensembl Show fit	SYF2 pre-mRNA-splicing factor
chr9_-_18371856 Show fit	0.03	ENSRNOT00000027293	Supt3h Links NCBI RGD Ensembl Show fit	SPT3 homolog, SAGA and STAGA complex component
chr1_-_263762785 Show fit	0.03	ENSRNOT00000018221	Cpn1 Links NCBI RGD Ensembl Show fit	carboxypeptidase N subunit 1
chr3_+_113319456 Show fit	0.03	ENSRNOT00000051354	Ckmt1 Links NCBI RGD Ensembl Show fit	creatine kinase, mitochondrial 1
chr14_+_115396017 Show fit	0.03	ENSRNOT00000067393	Asb3 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 3
chr14_-_62595854 Show fit	0.03	ENSRNOT00000003024	Yipf7 Links NCBI RGD Ensembl Show fit	Yip1 domain family, member 7
chr4_-_21920651 Show fit	0.03	ENSRNOT00000066211	Tmem243 Links NCBI RGD Ensembl Show fit	transmembrane protein 243
chr7_-_116936674 Show fit	0.03	ENSRNOT00000029456	Eef1d Links NCBI RGD Ensembl Show fit	eukaryotic translation elongation factor 1 delta
chr3_-_165537940 Show fit	0.03	ENSRNOT00000071119 ENSRNOT00000070964	Sall4 Links NCBI RGD Ensembl Show fit	spalt-like transcription factor 4
chr1_+_107344904 Show fit	0.03	ENSRNOT00000082582	Gas2 Links NCBI RGD Ensembl Show fit	growth arrest-specific 2
chr20_+_18492169 Show fit	0.03	ENSRNOT00000046536	LOC103690821 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L39
chr4_+_156253079 Show fit	0.03	ENSRNOT00000013536	Clec4d Links NCBI RGD Ensembl Show fit	C-type lectin domain family 4, member D
chr16_+_7035241 Show fit	0.03	ENSRNOT00000084977	Nek4 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 4
chr5_-_28131133 Show fit	0.03	ENSRNOT00000067331	Slc26a7 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 7
chr18_-_53181503 Show fit	0.03	ENSRNOT00000066548	Fbn2 Links NCBI RGD Ensembl Show fit	fibrillin 2
chr5_+_36566783 Show fit	0.03	ENSRNOT00000077650	Fbxl4 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 4
chr13_+_90943255 Show fit	0.03	ENSRNOT00000011539	Vsig8 Links NCBI RGD Ensembl Show fit	V-set and immunoglobulin domain containing 8
chr2_-_158156444 Show fit	0.03	ENSRNOT00000088559	Veph1 Links NCBI RGD Ensembl Show fit	ventricular zone expressed PH domain-containing 1
chr19_+_53055745 Show fit	0.03	ENSRNOT00000074430	Foxl1 Links NCBI RGD Ensembl Show fit	forkhead box L1
chr9_+_81566074 Show fit	0.02	ENSRNOT00000074131 ENSRNOT00000046229 ENSRNOT00000090383	Pnkd Links NCBI RGD Ensembl Show fit	paroxysmal nonkinesigenic dyskinesia
chr18_+_62852303 Show fit	0.02	ENSRNOT00000087673	Gnal Links NCBI RGD Ensembl Show fit	G protein subunit alpha L
chr2_-_45518502 Show fit	0.02	ENSRNOT00000014627	Hspb3 Links NCBI RGD Ensembl Show fit	heat shock protein family B (small) member 3
chr3_-_91195981 Show fit	0.02	ENSRNOT00000056935	RGD1309730 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA B230118H07
chr3_+_9403840 Show fit	0.02	ENSRNOT00000071380	NEWGENE_735020 Links NCBI RGD Ensembl Show fit	pyroglutamylated RFamide peptide
chr11_+_13499164 Show fit	0.02	ENSRNOT00000013159	LOC680121 Links NCBI RGD Ensembl Show fit	similar to heat shock protein 8
chr1_-_102699442 Show fit	0.02	ENSRNOT00000056109	Tph1 Links NCBI RGD Ensembl Show fit	tryptophan hydroxylase 1
chr1_-_227932603 Show fit	0.02	ENSRNOT00000033795	Ms4a6a Links NCBI RGD Ensembl Show fit	membrane spanning 4-domains A6A
chr9_+_88493593 Show fit	0.02	ENSRNOT00000020712	LOC102556337 Links NCBI RGD Ensembl Show fit	mitochondrial fission factor-like
chr9_-_81566096 Show fit	0.02	ENSRNOT00000019497	Aamp Links NCBI RGD Ensembl Show fit	angio-associated, migratory cell protein
chr5_+_145311375 Show fit	0.02	ENSRNOT00000019224	Smim12 Links NCBI RGD Ensembl Show fit	small integral membrane protein 12
chr9_-_79630452 Show fit	0.02	ENSRNOT00000078125 ENSRNOT00000086044 ENSRNOT00000089283	Pecr Links NCBI RGD Ensembl Show fit	peroxisomal trans-2-enoyl-CoA reductase
chr10_-_5511955 Show fit	0.02	ENSRNOT00000039429	Atf7ip2 Links NCBI RGD Ensembl Show fit	activating transcription factor 7 interacting protein 2
chr13_+_92264231 Show fit	0.02	ENSRNOT00000066509 ENSRNOT00000004716	Spta1 Links NCBI RGD Ensembl Show fit	spectrin, alpha, erythrocytic 1
chr3_+_146981984 Show fit	0.02	ENSRNOT00000090211	Nsfl1c Links NCBI RGD Ensembl Show fit	NSFL1 cofactor
chr1_-_134871167 Show fit	0.02	ENSRNOT00000076300	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chr3_+_2591331 Show fit	0.02	ENSRNOT00000017466	Sapcd2 Links NCBI RGD Ensembl Show fit	suppressor APC domain containing 2
chr10_+_10761477 Show fit	0.02	ENSRNOT00000004176	Rogdi Links NCBI RGD Ensembl Show fit	rogdi homolog
chr7_-_106653567 Show fit	0.02	ENSRNOT00000042522	Oc90 Links NCBI RGD Ensembl Show fit	otoconin 90
chr4_-_138830117 Show fit	0.02	ENSRNOT00000008403	Il5ra Links NCBI RGD Ensembl Show fit	interleukin 5 receptor subunit alpha
chr16_-_73152921 Show fit	0.02	ENSRNOT00000048602	Zmat4 Links NCBI RGD Ensembl Show fit	zinc finger, matrin type 4
chr20_+_4178686 Show fit	0.02	ENSRNOT00000080641	Tesb Links NCBI RGD Ensembl Show fit	testis specific basic protein
chr7_-_144837583 Show fit	0.02	ENSRNOT00000055289	Cbx5 Links NCBI RGD Ensembl Show fit	chromobox 5
chrM_+_9451 Show fit	0.02	ENSRNOT00000041241	Mt-nd3 Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH dehydrogenase 3
chr1_-_252461461 Show fit	0.02	ENSRNOT00000026093	Ankrd22 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 22
chr9_+_88918433 Show fit	0.02	ENSRNOT00000021730	Ccl20 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 20
chr7_-_2941122 Show fit	0.02	ENSRNOT00000082107	Esyt1 Links NCBI RGD Ensembl Show fit	extended synaptotagmin 1
chr4_-_17594598 Show fit	0.02	ENSRNOT00000008936	Sema3e Links NCBI RGD Ensembl Show fit	semaphorin 3E
chr4_-_87257667 Show fit	0.02	ENSRNOT00000083491	Nt5c3a Links NCBI RGD Ensembl Show fit	5'-nucleotidase, cytosolic IIIA
chr10_-_47546037 Show fit	0.02	ENSRNOT00000066109	Aldh3a2 Links NCBI RGD Ensembl Show fit	aldehyde dehydrogenase 3 family, member A2
chr5_-_28130803 Show fit	0.01	ENSRNOT00000093186	Slc26a7 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 7
chr4_+_8066737 Show fit	0.01	ENSRNOT00000063994	Srpk2 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 2
chr7_-_101138373 Show fit	0.01	ENSRNOT00000043257	LOC500877 Links NCBI RGD Ensembl Show fit	Ab1-152
chr14_-_43694584 Show fit	0.01	ENSRNOT00000041866	AABR07072400.1 Links NCBI RGD Ensembl Show fit
chr5_+_33097654 Show fit	0.01	ENSRNOT00000008087	Cngb3 Links NCBI RGD Ensembl Show fit	cyclic nucleotide gated channel beta 3
chrX_+_43626480 Show fit	0.01	ENSRNOT00000068078	Sat1 Links NCBI RGD Ensembl Show fit	spermidine/spermine N1-acetyl transferase 1
chr3_+_44806106 Show fit	0.01	ENSRNOT00000035158	Upp2 Links NCBI RGD Ensembl Show fit	uridine phosphorylase 2
chr10_-_47546345 Show fit	0.01	ENSRNOT00000077461	Aldh3a2 Links NCBI RGD Ensembl Show fit	aldehyde dehydrogenase 3 family, member A2
chr9_+_95398237 Show fit	0.01	ENSRNOT00000025879	Trpm8 Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily M, member 8
chr10_+_17579284 Show fit	0.01	ENSRNOT00000079698	Fbxw11 Links NCBI RGD Ensembl Show fit	F-box and WD repeat domain containing 11
chrX_+_112311251 Show fit	0.01	ENSRNOT00000086698	AABR07040855.1 Links NCBI RGD Ensembl Show fit
chr1_-_57518458 Show fit	0.01	ENSRNOT00000002040	Pdcd2 Links NCBI RGD Ensembl Show fit	programmed cell death 2
chr4_+_8066907 Show fit	0.01	ENSRNOT00000080811	Srpk2 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 2
chr3_+_110855000 Show fit	0.01	ENSRNOT00000081613	Knl1 Links NCBI RGD Ensembl Show fit	kinetochore scaffold 1
chr1_-_279277339 Show fit	0.01	ENSRNOT00000023667	Gfra1 Links NCBI RGD Ensembl Show fit	GDNF family receptor alpha 1
chr8_+_48718329 Show fit	0.01	ENSRNOT00000089763	Slc37a4 Links NCBI RGD Ensembl Show fit	solute carrier family 37 member 4
chr11_+_46737892 Show fit	0.01	ENSRNOT00000052182	AABR07033979.1 Links NCBI RGD Ensembl Show fit
chr10_-_88000423 Show fit	0.01	ENSRNOT00000076787 ENSRNOT00000046751 ENSRNOT00000091394	Krt32 Links NCBI RGD Ensembl Show fit	keratin 32
chr14_-_44078897 Show fit	0.01	ENSRNOT00000031792	N4bp2 Links NCBI RGD Ensembl Show fit	NEDD4 binding protein 2
chr2_+_208750356 Show fit	0.01	ENSRNOT00000041562	Chia Links NCBI RGD Ensembl Show fit	chitinase, acidic
chr11_-_86303453 Show fit	0.01	ENSRNOT00000071453	LOC498122 Links NCBI RGD Ensembl Show fit	similar to CG15908-PA
chr6_-_67084234 Show fit	0.01	ENSRNOT00000050372	Nova1 Links NCBI RGD Ensembl Show fit	NOVA alternative splicing regulator 1
chr20_+_42966140 Show fit	0.01	ENSRNOT00000000707	Marcks Links NCBI RGD Ensembl Show fit	myristoylated alanine rich protein kinase C substrate
chr3_-_14229067 Show fit	0.01	ENSRNOT00000025534 ENSRNOT00000092865	C5 Links NCBI RGD Ensembl Show fit	complement C5
chr1_+_22332090 Show fit	0.01	ENSRNOT00000091252	AABR07000663.1 Links NCBI RGD Ensembl Show fit	trace amine-associated receptor 8c (Taar8c), mRNA
chr5_+_146656049 Show fit	0.01	ENSRNOT00000036029	Csmd2 Links NCBI RGD Ensembl Show fit	CUB and Sushi multiple domains 2
chr11_-_46693565 Show fit	0.01	ENSRNOT00000044900	Impg2 Links NCBI RGD Ensembl Show fit	interphotoreceptor matrix proteoglycan 2
chr8_+_122076759 Show fit	0.01	ENSRNOT00000012545	Clasp2 Links NCBI RGD Ensembl Show fit	cytoplasmic linker associated protein 2
chr7_+_144865608 Show fit	0.01	ENSRNOT00000091596 ENSRNOT00000055285	Hnrnpa1 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A1
chr18_-_16543992 Show fit	0.01	ENSRNOT00000036306	Slc39a6 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 6
chr11_+_58624198 Show fit	0.01	ENSRNOT00000002091	Gap43 Links NCBI RGD Ensembl Show fit	growth associated protein 43
chr10_-_87286387 Show fit	0.01	ENSRNOT00000044206	Krt28 Links NCBI RGD Ensembl Show fit	keratin 28
chr10_+_53740841 Show fit	0.01	ENSRNOT00000004295	Myh2 Links NCBI RGD Ensembl Show fit	myosin heavy chain 2
chr1_+_101599018 Show fit	0.01	ENSRNOT00000028494	Fut1 Links NCBI RGD Ensembl Show fit	fucosyltransferase 1
chr8_-_53816447 Show fit	0.01	ENSRNOT00000011454	Ttc12 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 12
chr3_-_141411170 Show fit	0.01	ENSRNOT00000017364	Nkx2-2 Links NCBI RGD Ensembl Show fit	NK2 homeobox 2
chr2_-_236431596 Show fit	0.01	ENSRNOT00000055570 ENSRNOT00000089674	Cyp2u1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 2, subfamily u, polypeptide 1
chr2_+_118910587 Show fit	0.01	ENSRNOT00000065518	Zfp639 Links NCBI RGD Ensembl Show fit	zinc finger protein 639
chr5_-_101006375 Show fit	0.01	ENSRNOT00000014008	Cer1 Links NCBI RGD Ensembl Show fit	cerberus 1, DAN family BMP antagonist
chr5_+_133819726 Show fit	0.01	ENSRNOT00000081075	Stil Links NCBI RGD Ensembl Show fit	Scl/Tal1 interrupting locus
chr18_+_81694808 Show fit	0.01	ENSRNOT00000020446	Cyb5a Links NCBI RGD Ensembl Show fit	cytochrome b5 type A

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.3	1.9	GO:0016056	rhodopsin mediated signaling pathway(GO:0016056)
0.2	1.5	GO:0051970	negative regulation of transmission of nerve impulse(GO:0051970)
0.1	0.3	GO:2000422	regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)
0.1	0.2	GO:0014016	neuroblast differentiation(GO:0014016)
0.1	0.2	GO:0007208	phospholipase C-activating serotonin receptor signaling pathway(GO:0007208) phospholipase D-activating G-protein coupled receptor signaling pathway(GO:0031583)
0.1	0.5	GO:0046884	follicle-stimulating hormone secretion(GO:0046884)
0.1	0.2	GO:0035880	embryonic nail plate morphogenesis(GO:0035880)
0.1	0.6	GO:0032277	negative regulation of gonadotropin secretion(GO:0032277)
0.0	0.2	GO:0046013	regulation of T cell homeostatic proliferation(GO:0046013)
0.0	0.5	GO:2000042	negative regulation of double-strand break repair via homologous recombination(GO:2000042)
0.0	0.3	GO:0035726	common myeloid progenitor cell proliferation(GO:0035726)
0.0	0.2	GO:2000852	regulation of corticosterone secretion(GO:2000852)
0.0	0.1	GO:0009609	response to symbiotic bacterium(GO:0009609)
0.0	0.3	GO:0048251	elastic fiber assembly(GO:0048251)
0.0	0.1	GO:0072592	positive regulation of integrin biosynthetic process(GO:0045726) oxygen metabolic process(GO:0072592)
0.0	0.1	GO:1901162	serotonin biosynthetic process(GO:0042427) primary amino compound biosynthetic process(GO:1901162)
0.0	0.1	GO:1902276	pancreatic amylase secretion(GO:0036395) regulation of pancreatic amylase secretion(GO:1902276) positive regulation of histamine secretion by mast cell(GO:1903595)
0.0	0.1	GO:0060005	vestibular reflex(GO:0060005)
0.0	0.1	GO:0036233	glycine import(GO:0036233)
0.0	0.0	GO:0021905	pancreatic A cell development(GO:0003322) forebrain-midbrain boundary formation(GO:0021905) somatic motor neuron fate commitment(GO:0021917) regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment(GO:0021918) sensory neuron migration(GO:1904937)
0.0	0.0	GO:1903173	phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.0	0.1	GO:0046504	ether lipid biosynthetic process(GO:0008611) glycerol ether biosynthetic process(GO:0046504) ether biosynthetic process(GO:1901503)
0.0	0.3	GO:0010172	embryonic body morphogenesis(GO:0010172)
0.0	0.1	GO:0010944	negative regulation of transcription by competitive promoter binding(GO:0010944)
0.0	0.1	GO:0045647	negative regulation of erythrocyte differentiation(GO:0045647)
0.0	0.0	GO:0042706	eye photoreceptor cell fate commitment(GO:0042706) photoreceptor cell fate commitment(GO:0046552)
0.0	0.1	GO:0042264	peptidyl-aspartic acid hydroxylation(GO:0042264)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0071953	elastic fiber(GO:0071953)
0.0	0.1	GO:0035577	azurophil granule membrane(GO:0035577)
0.0	0.1	GO:0034774	secretory granule lumen(GO:0034774)
0.0	0.1	GO:0097413	Lewy body(GO:0097413)
0.0	0.1	GO:0071438	invadopodium membrane(GO:0071438)
0.0	1.3	GO:0005791	rough endoplasmic reticulum(GO:0005791)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0071886	1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding(GO:0071886)
0.1	1.6	GO:0005184	neuropeptide hormone activity(GO:0005184)
0.0	0.2	GO:0070996	type 1 melanocortin receptor binding(GO:0070996)
0.0	0.1	GO:0005294	neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.0	0.1	GO:0015252	hydrogen ion channel activity(GO:0015252)
0.0	0.1	GO:0016714	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen(GO:0016714)
0.0	0.1	GO:0043426	MRF binding(GO:0043426)
0.0	0.1	GO:0008597	calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0	0.1	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen(GO:0016715)
0.0	0.1	GO:0000268	peroxisome targeting sequence binding(GO:0000268)
0.0	0.2	GO:0001222	transcription corepressor binding(GO:0001222)
0.0	0.1	GO:0005499	vitamin D binding(GO:0005499)
0.0	0.0	GO:0004574	oligo-1,6-glucosidase activity(GO:0004574)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.7	REACTOME ANDROGEN BIOSYNTHESIS	Genes involved in Androgen biosynthesis
0.0	0.3	REACTOME ROLE OF DCC IN REGULATING APOPTOSIS	Genes involved in Role of DCC in regulating apoptosis
0.0	0.2	REACTOME SEROTONIN RECEPTORS	Genes involved in Serotonin receptors