GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Neurod2 Links NCBI RGD Ensembl	ENSRNOG00000028417	Neurod2
Bhlha15 Links NCBI RGD Ensembl	ENSRNOG00000025164	basic helix-loop-helix family, member a15
Bhlhe22 Links NCBI RGD Ensembl	ENSRNOG00000021745	basic helix-loop-helix family, member e22
Olig1 Links NCBI RGD Ensembl	ENSRNOG00000028648	oligodendrocyte transcription factor 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Bhlhe22	rn6_v1_chr2_+_102685513_102685513	0.69	1.9e-01	Click!
Bhlha15	rn6_v1_chr12_-_12407561_12407561	-0.67	2.2e-01	Click!
Olig1	rn6_v1_chr11_+_31428358_31428358	-0.03	9.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_-_66417741 Show fit	0.56	ENSRNOT00000007662	Neurod1 Links NCBI RGD Ensembl Show fit	neuronal differentiation 1
chr10_-_63952726 Show fit	0.55	ENSRNOT00000090461	Doc2b Links NCBI RGD Ensembl Show fit	double C2 domain beta
chr2_+_196334626 Show fit	0.53	ENSRNOT00000050914 ENSRNOT00000028645 ENSRNOT00000090729	Sema6c Links NCBI RGD Ensembl Show fit	semaphorin 6C
chr10_-_56530842 Show fit	0.51	ENSRNOT00000077451	AABR07029863.3 Links NCBI RGD Ensembl Show fit
chr8_-_63750531 Show fit	0.47	ENSRNOT00000009496	Neo1 Links NCBI RGD Ensembl Show fit	neogenin 1
chr7_-_114848414 Show fit	0.47	ENSRNOT00000032620	Slc45a4 Links NCBI RGD Ensembl Show fit	solute carrier family 45, member 4
chr3_+_145764932 Show fit	0.47	ENSRNOT00000075257	AABR07054264.1 Links NCBI RGD Ensembl Show fit
chr2_-_177924970 Show fit	0.40	ENSRNOT00000029340	Rapgef2 Links NCBI RGD Ensembl Show fit	Rap guanine nucleotide exchange factor 2
chr7_-_117978787 Show fit	0.37	ENSRNOT00000074262	Zfp647 Links NCBI RGD Ensembl Show fit	zinc finger protein 647
chr3_-_145810834 Show fit	0.34	ENSRNOT00000075429	LOC102555217 Links NCBI RGD Ensembl Show fit	zinc finger protein 120-like
chrX_-_76708878 Show fit	0.34	ENSRNOT00000045534	Atrx Links NCBI RGD Ensembl Show fit	ATRX, chromatin remodeler
chr4_-_81241152 Show fit	0.32	ENSRNOT00000015325 ENSRNOT00000015152	Hnrnpa2b1 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A2/B1
chr7_-_118518193 Show fit	0.32	ENSRNOT00000075636	LOC102555083 Links NCBI RGD Ensembl Show fit	zinc finger protein 250-like
chr3_+_150135821 Show fit	0.31	ENSRNOT00000047286	Zfp341 Links NCBI RGD Ensembl Show fit	zinc finger protein 341
chr6_+_60566196 Show fit	0.31	ENSRNOT00000006709 ENSRNOT00000075193	Dock4 Links NCBI RGD Ensembl Show fit	dedicator of cytokinesis 4
chrX_-_76924362 Show fit	0.30	ENSRNOT00000078997	Atrx Links NCBI RGD Ensembl Show fit	ATRX, chromatin remodeler
chr3_-_13525983 Show fit	0.29	ENSRNOT00000082036	Pbx3 Links NCBI RGD Ensembl Show fit	PBX homeobox 3
chr6_-_76552559 Show fit	0.26	ENSRNOT00000065230	Ralgapa1 Links NCBI RGD Ensembl Show fit	Ral GTPase activating protein catalytic alpha subunit 1
chr3_-_66335869 Show fit	0.24	ENSRNOT00000079781 ENSRNOT00000043238 ENSRNOT00000073412 ENSRNOT00000057878 ENSRNOT00000079212	Cerkl Links NCBI RGD Ensembl Show fit	ceramide kinase-like
chr17_-_8331032 Show fit	0.23	ENSRNOT00000016704	Smad5 Links NCBI RGD Ensembl Show fit	SMAD family member 5
chr3_-_123179644 Show fit	0.23	ENSRNOT00000028835	Lzts3 Links NCBI RGD Ensembl Show fit	leucine zipper tumor suppressor family member 3
chr20_+_3995544 Show fit	0.23	ENSRNOT00000000527	Tap2 Links NCBI RGD Ensembl Show fit	transporter 2, ATP binding cassette subfamily B member
chr20_-_5212624 Show fit	0.21	ENSRNOT00000074261	LOC103689996 Links NCBI RGD Ensembl Show fit	antigen peptide transporter 2
chr3_+_172155496 Show fit	0.21	ENSRNOT00000066279	Stx16 Links NCBI RGD Ensembl Show fit	syntaxin 16
chr20_-_5485837 Show fit	0.21	ENSRNOT00000092272 ENSRNOT00000000559 ENSRNOT00000092597	Daxx Links NCBI RGD Ensembl Show fit	death-domain associated protein
chr4_-_31730386 Show fit	0.20	ENSRNOT00000013817	Slc25a13 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 13
chr10_-_16046033 Show fit	0.20	ENSRNOT00000089460	Cpeb4 Links NCBI RGD Ensembl Show fit	cytoplasmic polyadenylation element binding protein 4
chr20_+_6211420 Show fit	0.19	ENSRNOT00000000624	Kctd20 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 20
chr10_-_16045835 Show fit	0.18	ENSRNOT00000064832	Cpeb4 Links NCBI RGD Ensembl Show fit	cytoplasmic polyadenylation element binding protein 4
chr3_+_40038336 Show fit	0.17	ENSRNOT00000048804	Galnt13 Links NCBI RGD Ensembl Show fit	polypeptide N-acetylgalactosaminyltransferase 13
chr9_+_16508799 Show fit	0.17	ENSRNOT00000021803	Rpl7l1 Links NCBI RGD Ensembl Show fit	ribosomal protein L7-like 1
chr6_+_52663112 Show fit	0.17	ENSRNOT00000013842	Atxn7l1 Links NCBI RGD Ensembl Show fit	ataxin 7-like 1
chr2_+_196594303 Show fit	0.17	ENSRNOT00000064442 ENSRNOT00000044738	Arnt Links NCBI RGD Ensembl Show fit	aryl hydrocarbon receptor nuclear translocator
chr8_+_69971778 Show fit	0.16	ENSRNOT00000058007 ENSRNOT00000037941 ENSRNOT00000050649	Megf11 Links NCBI RGD Ensembl Show fit	multiple EGF-like-domains 11
chr9_-_81586116 Show fit	0.15	ENSRNOT00000089952	Tmbim1 Links NCBI RGD Ensembl Show fit	transmembrane BAX inhibitor motif containing 1
chr16_+_35573058 Show fit	0.15	ENSRNOT00000059580	Galntl6 Links NCBI RGD Ensembl Show fit	polypeptide N-acetylgalactosaminyltransferase-like 6
chr17_-_10208360 Show fit	0.15	ENSRNOT00000087397	Unc5a Links NCBI RGD Ensembl Show fit	unc-5 netrin receptor A
chr2_+_122368265 Show fit	0.15	ENSRNOT00000078321	Atp11b Links NCBI RGD Ensembl Show fit	ATPase phospholipid transporting 11B (putative)
chr15_-_48445588 Show fit	0.14	ENSRNOT00000077197 ENSRNOT00000018583	Extl3 Links NCBI RGD Ensembl Show fit	exostosin-like glycosyltransferase 3
chr10_+_19366793 Show fit	0.14	ENSRNOT00000050610	Fam196b Links NCBI RGD Ensembl Show fit	family with sequence similarity 196, member B
chr5_+_58636083 Show fit	0.14	ENSRNOT00000067281	Unc13b Links NCBI RGD Ensembl Show fit	unc-13 homolog B
chr4_-_170783725 Show fit	0.14	ENSRNOT00000072528	Wbp11 Links NCBI RGD Ensembl Show fit	WW domain binding protein 11
chr6_+_26566494 Show fit	0.13	ENSRNOT00000079292	Gtf3c2 Links NCBI RGD Ensembl Show fit	general transcription factor IIIC subunit 2
chr10_-_51576376 Show fit	0.13	ENSRNOT00000004829	Arhgap44 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 44
chr10_+_65523193 Show fit	0.13	ENSRNOT00000016084	RGD1307929 Links NCBI RGD Ensembl Show fit	similar to CG14967-PA
chr5_-_2982603 Show fit	0.13	ENSRNOT00000045460	Kcnb2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily B member 2
chr2_-_39003552 Show fit	0.12	ENSRNOT00000078884	Zswim6 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 6
chr19_+_20147037 Show fit	0.12	ENSRNOT00000020028	Zfp423 Links NCBI RGD Ensembl Show fit	zinc finger protein 423
chr20_+_5535432 Show fit	0.12	ENSRNOT00000040859	Syngap1 Links NCBI RGD Ensembl Show fit	synaptic Ras GTPase activating protein 1
chr10_+_74959285 Show fit	0.11	ENSRNOT00000010296	Rnf43 Links NCBI RGD Ensembl Show fit	ring finger protein 43
chr9_+_16302578 Show fit	0.11	ENSRNOT00000021762	Gltscr1l Links NCBI RGD Ensembl Show fit	GLTSCR1-like
chr5_-_169630340 Show fit	0.11	ENSRNOT00000087043	Kcnab2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily A regulatory beta subunit 2
chr1_-_43831932 Show fit	0.11	ENSRNOT00000082931	Cnksr3 Links NCBI RGD Ensembl Show fit	Cnksr family member 3
chr13_+_110257571 Show fit	0.11	ENSRNOT00000005715	Ints7 Links NCBI RGD Ensembl Show fit	integrator complex subunit 7
chr9_+_119542328 Show fit	0.11	ENSRNOT00000082005	Lpin2 Links NCBI RGD Ensembl Show fit	lipin 2
chr12_-_18526250 Show fit	0.10	ENSRNOT00000001791	Asmt Links NCBI RGD Ensembl Show fit	acetylserotonin O-methyltransferase
chrX_+_6273733 Show fit	0.10	ENSRNOT00000074275	Ndp Links NCBI RGD Ensembl Show fit	NDP, norrin cystine knot growth factor
chr6_-_44363915 Show fit	0.09	ENSRNOT00000085925	Id2 Links NCBI RGD Ensembl Show fit	inhibitor of DNA binding 2, HLH protein
chr16_-_83438561 Show fit	0.09	ENSRNOT00000057461	Col4a2 Links NCBI RGD Ensembl Show fit	collagen type IV alpha 2 chain
chr13_+_67611708 Show fit	0.09	ENSRNOT00000063833	Tpr Links NCBI RGD Ensembl Show fit	translocated promoter region, nuclear basket protein
chrX_-_29648359 Show fit	0.09	ENSRNOT00000086721 ENSRNOT00000006777	Gpm6b Links NCBI RGD Ensembl Show fit	glycoprotein m6b
chr1_-_217620420 Show fit	0.09	ENSRNOT00000092783	Cttn Links NCBI RGD Ensembl Show fit	cortactin
chr10_+_11393103 Show fit	0.09	ENSRNOT00000076022	Adcy9 Links NCBI RGD Ensembl Show fit	adenylate cyclase 9
chr8_-_23390773 Show fit	0.09	ENSRNOT00000019601 ENSRNOT00000071846	Anln Links NCBI RGD Ensembl Show fit	anillin, actin binding protein
chr11_+_9642365 Show fit	0.08	ENSRNOT00000087080 ENSRNOT00000042384	Robo1 Links NCBI RGD Ensembl Show fit	roundabout guidance receptor 1
chrX_-_111365849 Show fit	0.08	ENSRNOT00000088979	Nup62cl Links NCBI RGD Ensembl Show fit	nucleoporin 62 C-terminal like
chr1_+_199351628 Show fit	0.08	ENSRNOT00000078578	Bckdk Links NCBI RGD Ensembl Show fit	branched chain ketoacid dehydrogenase kinase
chr11_+_61083757 Show fit	0.08	ENSRNOT00000002790	Boc Links NCBI RGD Ensembl Show fit	BOC cell adhesion associated, oncogene regulated
chr6_+_136245027 Show fit	0.08	ENSRNOT00000086997	LOC103692719 Links NCBI RGD Ensembl Show fit	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A
chr12_-_51250230 Show fit	0.08	ENSRNOT00000029508	Mn1 Links NCBI RGD Ensembl Show fit	meningioma 1
chr14_-_28856214 Show fit	0.08	ENSRNOT00000044659	Adgrl3 Links NCBI RGD Ensembl Show fit	adhesion G protein-coupled receptor L3
chr20_-_29579578 Show fit	0.08	ENSRNOT00000000700	AC096404.1 Links NCBI RGD Ensembl Show fit
chr19_-_22632071 Show fit	0.07	ENSRNOT00000077275	Gpt2 Links NCBI RGD Ensembl Show fit	glutamic--pyruvic transaminase 2
chr7_-_120518653 Show fit	0.07	ENSRNOT00000016362	Baiap2l2 Links NCBI RGD Ensembl Show fit	BAI1-associated protein 2-like 2
chr7_+_117456039 Show fit	0.07	ENSRNOT00000051754	Mroh1 Links NCBI RGD Ensembl Show fit	maestro heat-like repeat family member 1
chr2_+_123617794 Show fit	0.07	ENSRNOT00000080632	RGD1307100 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA D630029K19
chr4_+_57378069 Show fit	0.07	ENSRNOT00000080173 ENSRNOT00000011851	Nrf1 Links NCBI RGD Ensembl Show fit	nuclear respiratory factor 1
chr9_+_112360419 Show fit	0.07	ENSRNOT00000086682	Man2a1 Links NCBI RGD Ensembl Show fit	mannosidase, alpha, class 2A, member 1
chr2_-_118989127 Show fit	0.07	ENSRNOT00000014871	Gnb4 Links NCBI RGD Ensembl Show fit	G protein subunit beta 4
chr17_+_30556884 Show fit	0.07	ENSRNOT00000080929 ENSRNOT00000022022	Eci2 Links NCBI RGD Ensembl Show fit	enoyl-CoA delta isomerase 2
chr1_-_264706476 Show fit	0.07	ENSRNOT00000045446	AC121209.1 Links NCBI RGD Ensembl Show fit
chr5_+_98469047 Show fit	0.06	ENSRNOT00000041374	Lurap1l Links NCBI RGD Ensembl Show fit	leucine rich adaptor protein 1-like
chr1_+_84070983 Show fit	0.06	ENSRNOT00000090478	Numbl Links NCBI RGD Ensembl Show fit	NUMB-like, endocytic adaptor protein
chr7_-_117151694 Show fit	0.06	ENSRNOT00000051294	Nrbp2 Links NCBI RGD Ensembl Show fit	nuclear receptor binding protein 2
chr17_-_86657473 Show fit	0.06	ENSRNOT00000078827	AABR07028795.1 Links NCBI RGD Ensembl Show fit
chr1_-_212354273 Show fit	0.06	ENSRNOT00000024573	Tubgcp2 Links NCBI RGD Ensembl Show fit	tubulin, gamma complex associated protein 2
chr8_-_78397123 Show fit	0.06	ENSRNOT00000087270 ENSRNOT00000084925	Tcf12 Links NCBI RGD Ensembl Show fit	transcription factor 12
chr8_+_50604768 Show fit	0.06	ENSRNOT00000059383	AC135409.1 Links NCBI RGD Ensembl Show fit
chr4_-_22424862 Show fit	0.06	ENSRNOT00000082359	Abcb1a Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily B member 1A
chr9_+_2202511 Show fit	0.05	ENSRNOT00000017556	Satb1 Links NCBI RGD Ensembl Show fit	SATB homeobox 1
chr1_+_99505677 Show fit	0.05	ENSRNOT00000024645	Zfp719 Links NCBI RGD Ensembl Show fit	zinc finger protein 719
chr16_+_35116440 Show fit	0.05	ENSRNOT00000074353	AABR07025358.1 Links NCBI RGD Ensembl Show fit
chr10_+_11392625 Show fit	0.05	ENSRNOT00000072802	Adcy9 Links NCBI RGD Ensembl Show fit	adenylate cyclase 9
chr14_+_77922045 Show fit	0.05	ENSRNOT00000081198	Stk32b Links NCBI RGD Ensembl Show fit	serine/threonine kinase 32B
chr5_-_12563429 Show fit	0.05	ENSRNOT00000059625	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr4_+_78378313 Show fit	0.05	ENSRNOT00000083891	Gimap5 Links NCBI RGD Ensembl Show fit	GTPase, IMAP family member 5
chr16_-_71237118 Show fit	0.04	ENSRNOT00000066974	Nsd3 Links NCBI RGD Ensembl Show fit	nuclear receptor binding SET domain protein 3
chr5_-_135025084 Show fit	0.04	ENSRNOT00000018766	Tspan1 Links NCBI RGD Ensembl Show fit	tetraspanin 1
chr7_-_52404774 Show fit	0.04	ENSRNOT00000082100	Nav3 Links NCBI RGD Ensembl Show fit	neuron navigator 3
chr1_-_189181901 Show fit	0.04	ENSRNOT00000092022	Gp2 Links NCBI RGD Ensembl Show fit	glycoprotein 2
chr17_+_66548818 Show fit	0.04	ENSRNOT00000024361	Anlnl1 Links NCBI RGD Ensembl Show fit	anillin, actin binding protein-like 1
chr7_+_2752680 Show fit	0.04	ENSRNOT00000033726	Cs Links NCBI RGD Ensembl Show fit	citrate synthase
chr20_+_7767395 Show fit	0.04	ENSRNOT00000084771	Zfp523 Links NCBI RGD Ensembl Show fit	zinc finger protein 523
chr3_-_111994337 Show fit	0.04	ENSRNOT00000030502	Pla2g4e Links NCBI RGD Ensembl Show fit	phospholipase A2, group IVE
chr10_-_16910641 Show fit	0.04	ENSRNOT00000005273	Ergic1 Links NCBI RGD Ensembl Show fit	endoplasmic reticulum-golgi intermediate compartment 1
chr4_-_155740193 Show fit	0.04	ENSRNOT00000043229	LOC102550396 Links NCBI RGD Ensembl Show fit	LRRGT00188
chr4_+_78378144 Show fit	0.04	ENSRNOT00000059156	Gimap5 Links NCBI RGD Ensembl Show fit	GTPase, IMAP family member 5
chr9_+_51298426 Show fit	0.04	ENSRNOT00000065212	Gulp1 Links NCBI RGD Ensembl Show fit	GULP, engulfment adaptor PTB domain containing 1
chr15_-_100348760 Show fit	0.04	ENSRNOT00000085607	AABR07019341.1 Links NCBI RGD Ensembl Show fit
chr3_+_148837814 Show fit	0.03	ENSRNOT00000091808	Asxl1 Links NCBI RGD Ensembl Show fit	additional sex combs like 1
chr18_-_68551558 Show fit	0.03	ENSRNOT00000016369	Rab27b Links NCBI RGD Ensembl Show fit	RAB27B, member RAS oncogene family
chr3_+_128155069 Show fit	0.03	ENSRNOT00000051184 ENSRNOT00000006389	Plcb1 Links NCBI RGD Ensembl Show fit	phospholipase C beta 1
chr17_+_87274944 Show fit	0.03	ENSRNOT00000073718	Etl4 Links NCBI RGD Ensembl Show fit	enhancer trap locus 4
chr2_-_189395746 Show fit	0.03	ENSRNOT00000089042	Ubap2l Links NCBI RGD Ensembl Show fit	ubiquitin associated protein 2-like
chr3_+_80468154 Show fit	0.03	ENSRNOT00000021837	Ckap5 Links NCBI RGD Ensembl Show fit	cytoskeleton associated protein 5
chr3_-_146407252 Show fit	0.03	ENSRNOT00000091310	Apmap Links NCBI RGD Ensembl Show fit	adipocyte plasma membrane associated protein
chr8_-_28044876 Show fit	0.03	ENSRNOT00000072152	Acad8 Links NCBI RGD Ensembl Show fit	acyl-CoA dehydrogenase family, member 8
chr3_-_37445907 Show fit	0.03	ENSRNOT00000006172	Rbm43 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 43
chr8_-_48634797 Show fit	0.03	ENSRNOT00000012868	Hinfp Links NCBI RGD Ensembl Show fit	histone H4 transcription factor
chr1_-_62316450 Show fit	0.03	ENSRNOT00000079171	AABR07001926.3 Links NCBI RGD Ensembl Show fit
chr14_-_3300200 Show fit	0.03	ENSRNOT00000037931	Btbd8 Links NCBI RGD Ensembl Show fit	BTB (POZ) domain containing 8
chr4_+_79868442 Show fit	0.03	ENSRNOT00000089973	Mpp6 Links NCBI RGD Ensembl Show fit	membrane palmitoylated protein 6
chr20_-_2083688 Show fit	0.03	ENSRNOT00000001011	Znrd1as1 Links NCBI RGD Ensembl Show fit	ZNRD1 antisense RNA 1
chr10_-_4910305 Show fit	0.03	ENSRNOT00000033122	Rmi2 Links NCBI RGD Ensembl Show fit	RecQ mediated genome instability 2
chrX_-_65101425 Show fit	0.03	ENSRNOT00000076732	Las1l Links NCBI RGD Ensembl Show fit	LAS1-like, ribosome biogenesis factor
chr5_-_136166786 Show fit	0.03	ENSRNOT00000026201	Rnf220 Links NCBI RGD Ensembl Show fit	ring finger protein 220
chr19_+_52647070 Show fit	0.03	ENSRNOT00000068389 ENSRNOT00000087857	Crispld2 Links NCBI RGD Ensembl Show fit	cysteine-rich secretory protein LCCL domain containing 2
chr10_+_99388130 Show fit	0.02	ENSRNOT00000006238	Kcnj16 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 16
chr4_-_10517832 Show fit	0.02	ENSRNOT00000039953 ENSRNOT00000083964	Gsap Links NCBI RGD Ensembl Show fit	gamma-secretase activating protein
chr1_+_219250265 Show fit	0.02	ENSRNOT00000024353	Doc2g Links NCBI RGD Ensembl Show fit	double C2-like domains, gamma
chr4_-_84740909 Show fit	0.02	ENSRNOT00000013088	Scrn1 Links NCBI RGD Ensembl Show fit	secernin 1
chr9_-_53118613 Show fit	0.02	ENSRNOT00000065581	Ormdl1 Links NCBI RGD Ensembl Show fit	ORMDL sphingolipid biosynthesis regulator 1
chr3_-_38090526 Show fit	0.02	ENSRNOT00000059430	Cacnb4 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit beta 4
chr2_+_198721724 Show fit	0.02	ENSRNOT00000043535	Ankrd34a Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 34A
chr5_-_6186329 Show fit	0.02	ENSRNOT00000012610	Sulf1 Links NCBI RGD Ensembl Show fit	sulfatase 1
chr19_+_24329544 Show fit	0.01	ENSRNOT00000080934	Tbc1d9 Links NCBI RGD Ensembl Show fit	TBC1 domain family member 9
chr10_+_84182118 Show fit	0.01	ENSRNOT00000011027	Hoxb3 Links NCBI RGD Ensembl Show fit	homeo box B3
chr1_-_266428239 Show fit	0.01	ENSRNOT00000027160	Cyp17a1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 17, subfamily a, polypeptide 1
chr9_+_51302151 Show fit	0.01	ENSRNOT00000085908	Gulp1 Links NCBI RGD Ensembl Show fit	GULP, engulfment adaptor PTB domain containing 1
chr11_-_87449940 Show fit	0.01	ENSRNOT00000002560	Slc7a4 Links NCBI RGD Ensembl Show fit	solute carrier family 7, member 4
chr1_+_164425475 Show fit	0.01	ENSRNOT00000023386	Klhl35 Links NCBI RGD Ensembl Show fit	kelch-like family member 35
chr20_+_3309899 Show fit	0.01	ENSRNOT00000001049	Abcf1 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily F member 1
chr10_-_109821807 Show fit	0.01	ENSRNOT00000054949	Pycr1 Links NCBI RGD Ensembl Show fit	pyrroline-5-carboxylate reductase 1
chr14_-_12387102 Show fit	0.01	ENSRNOT00000038872	Bmp3 Links NCBI RGD Ensembl Show fit	bone morphogenetic protein 3
chr18_+_70192493 Show fit	0.01	ENSRNOT00000020472	Cxxc1 Links NCBI RGD Ensembl Show fit	CXXC finger protein 1
chr11_+_68633160 Show fit	0.01	ENSRNOT00000063795	Sec22a Links NCBI RGD Ensembl Show fit	SEC22 homolog A, vesicle trafficking protein
chr20_+_29445510 Show fit	0.01	ENSRNOT00000044805	Dnajb12 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member B12
chr8_+_107499262 Show fit	0.01	ENSRNOT00000081029	Cep70 Links NCBI RGD Ensembl Show fit	centrosomal protein 70
chr1_-_197821936 Show fit	0.01	ENSRNOT00000055027	Cd19 Links NCBI RGD Ensembl Show fit	CD19 molecule
chr11_+_76147205 Show fit	0.01	ENSRNOT00000071586	Fgf12 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 12
chr1_+_190671696 Show fit	0.01	ENSRNOT00000084934	AABR07005633.1 Links NCBI RGD Ensembl Show fit
chr4_-_130659697 Show fit	0.01	ENSRNOT00000072374	LOC100363436 Links NCBI RGD Ensembl Show fit	rCG56280-like
chr2_+_54660722 Show fit	0.01	ENSRNOT00000060376	Mroh2b Links NCBI RGD Ensembl Show fit	maestro heat-like repeat family member 2B
chr7_+_72599479 Show fit	0.01	ENSRNOT00000018963	AABR07057460.1 Links NCBI RGD Ensembl Show fit
chr2_-_21437193 Show fit	0.01	ENSRNOT00000084002	Ckmt2 Links NCBI RGD Ensembl Show fit	creatine kinase, mitochondrial 2
chr2_+_179952227 Show fit	0.01	ENSRNOT00000015081	Pdgfc Links NCBI RGD Ensembl Show fit	platelet derived growth factor C
chr6_+_18880737 Show fit	0.01	ENSRNOT00000003432	Alkbh8 Links NCBI RGD Ensembl Show fit	alkB homolog 8, tRNA methyltransferase
chr2_-_210088949 Show fit	0.01	ENSRNOT00000070994	Rbm15 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 15
chr1_-_241155537 Show fit	0.01	ENSRNOT00000034216 ENSRNOT00000073493	Mamdc2 Links NCBI RGD Ensembl Show fit	MAM domain containing 2
chr1_+_265761738 Show fit	0.00	ENSRNOT00000024898	Hps6 Links NCBI RGD Ensembl Show fit	Hermansky-Pudlak syndrome 6
chr7_+_70328391 Show fit	0.00	ENSRNOT00000075544	Mettl1 Links NCBI RGD Ensembl Show fit	methyltransferase like 1
chr1_+_17602281 Show fit	0.00	ENSRNOT00000075461	LOC103690149 Links NCBI RGD Ensembl Show fit	jouberin-like
chr12_-_12752583 Show fit	0.00	ENSRNOT00000092346	Eif2ak1 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2 alpha kinase 1
chr18_-_77535564 Show fit	0.00	ENSRNOT00000041380 ENSRNOT00000090265	Atp9b Links NCBI RGD Ensembl Show fit	ATPase phospholipid transporting 9B (putative)
chr12_+_41600005 Show fit	0.00	ENSRNOT00000001872	Plbd2 Links NCBI RGD Ensembl Show fit	phospholipase B domain containing 2
chr5_+_25168295 Show fit	0.00	ENSRNOT00000020245	Fsbp Links NCBI RGD Ensembl Show fit	fibrinogen silencer binding protein
chr10_+_69737328 Show fit	0.00	ENSRNOT00000055999 ENSRNOT00000076773	Tmem132e Links NCBI RGD Ensembl Show fit	transmembrane protein 132E
chr3_+_37545238 Show fit	0.00	ENSRNOT00000070792	Tnfaip6 Links NCBI RGD Ensembl Show fit	TNF alpha induced protein 6
chr11_+_43194348 Show fit	0.00	ENSRNOT00000075303	Olr1532 Links NCBI RGD Ensembl Show fit	olfactory receptor 1532

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.6	GO:0035120	post-embryonic appendage morphogenesis(GO:0035120) post-embryonic limb morphogenesis(GO:0035127) post-embryonic forelimb morphogenesis(GO:0035128) telomeric repeat-containing RNA transcription(GO:0097393) telomeric repeat-containing RNA transcription from RNA pol II promoter(GO:0097394) regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901580) negative regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901581) positive regulation of telomeric RNA transcription from RNA pol II promoter(GO:1901582)
0.2	0.5	GO:0015770	disaccharide transport(GO:0015766) sucrose transport(GO:0015770) oligosaccharide transport(GO:0015772)
0.1	0.6	GO:0060729	intestinal epithelial structure maintenance(GO:0060729)
0.1	0.3	GO:1904694	negative regulation of vascular smooth muscle contraction(GO:1904694)
0.1	0.4	GO:0048022	negative regulation of melanin biosynthetic process(GO:0048022) negative regulation of secondary metabolite biosynthetic process(GO:1900377)
0.1	0.2	GO:0002585	antigen processing and presentation of exogenous peptide antigen via MHC class Ib(GO:0002477) antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent(GO:0002481) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) positive regulation of antigen processing and presentation of peptide antigen(GO:0002585) regulation of antigen processing and presentation of peptide antigen via MHC class I(GO:0002589) cytosol to ER transport(GO:0046967) peptide antigen transport(GO:0046968)
0.1	0.2	GO:0071454	cellular response to anoxia(GO:0071454)
0.1	0.3	GO:0044806	G-quadruplex DNA unwinding(GO:0044806)
0.1	0.2	GO:0001880	Mullerian duct regression(GO:0001880)
0.1	0.2	GO:0043490	malate-aspartate shuttle(GO:0043490)
0.0	0.2	GO:0002483	antigen processing and presentation of endogenous peptide antigen(GO:0002483) antigen processing and presentation of endogenous peptide antigen via MHC class I(GO:0019885)
0.0	0.4	GO:2000766	negative regulation of cytoplasmic translation(GO:2000766)
0.0	0.5	GO:0031340	positive regulation of vesicle fusion(GO:0031340)
0.0	0.1	GO:0030186	melatonin metabolic process(GO:0030186)
0.0	0.1	GO:0010808	positive regulation of synaptic vesicle priming(GO:0010808)
0.0	0.1	GO:0098886	modification of dendritic spine(GO:0098886)
0.0	0.5	GO:0048681	negative regulation of axon regeneration(GO:0048681)
0.0	0.1	GO:0001966	thigmotaxis(GO:0001966)
0.0	0.1	GO:0010847	MAPK import into nucleus(GO:0000189) regulation of chromatin assembly(GO:0010847) positive regulation of chromatin assembly or disassembly(GO:0045799)
0.0	0.1	GO:0021836	chemorepulsion involved in postnatal olfactory bulb interneuron migration(GO:0021836)
0.0	0.1	GO:0033564	anterior/posterior axon guidance(GO:0033564)
0.0	0.1	GO:0090521	glomerular visceral epithelial cell migration(GO:0090521)
0.0	0.1	GO:1902044	regulation of Fas signaling pathway(GO:1902044)
0.0	0.1	GO:0021849	neuroblast division in subventricular zone(GO:0021849)
0.0	0.1	GO:0042851	L-alanine metabolic process(GO:0042851)
0.0	0.1	GO:0051611	negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612)
0.0	0.3	GO:0002087	regulation of respiratory gaseous exchange by neurological system process(GO:0002087)
0.0	0.2	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0	0.1	GO:0035426	extracellular matrix-cell signaling(GO:0035426)
0.0	0.1	GO:0002729	positive regulation of natural killer cell cytokine production(GO:0002729)
0.0	0.1	GO:1990963	carbohydrate export(GO:0033231) daunorubicin transport(GO:0043215) response to borneol(GO:1905230) cellular response to borneol(GO:1905231) response to codeine(GO:1905233) response to quercetin(GO:1905235) drug transport across blood-brain barrier(GO:1990962) establishment of blood-retinal barrier(GO:1990963)
0.0	0.0	GO:0002386	immune response in mucosal-associated lymphoid tissue(GO:0002386)
0.0	0.1	GO:0036072	intramembranous ossification(GO:0001957) direct ossification(GO:0036072)
0.0	0.2	GO:0043619	regulation of transcription from RNA polymerase II promoter in response to oxidative stress(GO:0043619)
0.0	0.0	GO:0035359	negative regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035359)
0.0	0.0	GO:0031161	phosphatidylinositol catabolic process(GO:0031161) monocyte extravasation(GO:0035696) interleukin-12-mediated signaling pathway(GO:0035722) interleukin-15-mediated signaling pathway(GO:0035723) cellular response to interleukin-12(GO:0071349) cellular response to interleukin-15(GO:0071350) cellular response to fluoride(GO:1902618)
0.0	0.1	GO:0098885	modification of postsynaptic actin cytoskeleton(GO:0098885)
0.0	0.1	GO:0070995	NADPH oxidation(GO:0070995)
0.0	0.2	GO:0090161	Golgi ribbon formation(GO:0090161)
0.0	0.1	GO:0034472	snRNA 3'-end processing(GO:0034472)
0.0	0.1	GO:0051415	interphase microtubule nucleation by interphase microtubule organizing center(GO:0051415) microtubule nucleation by microtubule organizing center(GO:0051418)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.6	GO:1990421	subtelomeric heterochromatin(GO:1990421) nuclear subtelomeric heterochromatin(GO:1990707)
0.1	0.4	GO:0042825	TAP complex(GO:0042825)
0.0	0.3	GO:0071598	neuronal ribonucleoprotein granule(GO:0071598)
0.0	0.1	GO:0008275	gamma-tubulin small complex(GO:0008275)
0.0	0.1	GO:0000127	transcription factor TFIIIC complex(GO:0000127)
0.0	0.1	GO:0044305	calyx of Held(GO:0044305)
0.0	0.1	GO:0005947	mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)
0.0	0.1	GO:0098871	postsynaptic actin cytoskeleton(GO:0098871) postsynaptic cytoskeleton(GO:0099571)
0.0	0.3	GO:1990124	messenger ribonucleoprotein complex(GO:1990124)
0.0	0.8	GO:0031201	SNARE complex(GO:0031201)
0.0	0.1	GO:0005587	collagen type IV trimer(GO:0005587) network-forming collagen trimer(GO:0098642) collagen network(GO:0098645)
0.0	0.1	GO:0044615	nuclear pore nuclear basket(GO:0044615)
0.0	0.2	GO:0001741	XY body(GO:0001741)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.5	GO:0008506	sucrose:proton symporter activity(GO:0008506) sucrose transmembrane transporter activity(GO:0008515) disaccharide transmembrane transporter activity(GO:0015154) oligosaccharide transmembrane transporter activity(GO:0015157)
0.1	0.6	GO:0015616	DNA translocase activity(GO:0015616)
0.1	0.3	GO:0001069	regulatory region RNA binding(GO:0001069)
0.1	0.4	GO:0015440	peptide-transporting ATPase activity(GO:0015440)
0.1	0.4	GO:0031697	beta-1 adrenergic receptor binding(GO:0031697)
0.1	0.2	GO:0004874	aryl hydrocarbon receptor activity(GO:0004874)
0.0	0.2	GO:0001729	ceramide kinase activity(GO:0001729)
0.0	0.5	GO:0039706	co-receptor binding(GO:0039706)
0.0	0.2	GO:0015183	L-aspartate transmembrane transporter activity(GO:0015183)
0.0	0.5	GO:0030215	semaphorin receptor binding(GO:0030215)
0.0	0.1	GO:0005042	netrin receptor activity(GO:0005042)
0.0	0.4	GO:0000900	translation repressor activity, nucleic acid binding(GO:0000900)
0.0	0.1	GO:0047635	L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.0	0.2	GO:0017151	DEAD/H-box RNA helicase binding(GO:0017151)
0.0	0.2	GO:0008432	JUN kinase binding(GO:0008432)
0.0	0.1	GO:0004165	dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.0	0.1	GO:0019992	diacylglycerol binding(GO:0019992)
0.0	0.6	GO:0070888	E-box binding(GO:0070888)
0.0	0.1	GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653)
0.0	0.1	GO:0090555	phosphatidylethanolamine-translocating ATPase activity(GO:0090555)
0.0	0.1	GO:0043495	protein anchor(GO:0043495)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	PID ALK2 PATHWAY	ALK2 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	REACTOME MYOGENESIS	Genes involved in Myogenesis
0.0	0.4	REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS	Genes involved in Regulation of gene expression in beta cells
0.0	0.2	REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC	Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0	0.2	REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS	Genes involved in Proteolytic cleavage of SNARE complex proteins
0.0	0.1	REACTOME ROLE OF DCC IN REGULATING APOPTOSIS	Genes involved in Role of DCC in regulating apoptosis