GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nfat5 Links NCBI RGD Ensembl	ENSRNOG00000011879	nuclear factor of activated T-cells 5

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nfat5	rn6_v1_chr19_-_38533735_38533735	0.51	3.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_218466289 Show fit	0.17	ENSRNOT00000017948	Mrgprf Links NCBI RGD Ensembl Show fit	MAS related GPR family member F
chr17_+_24242642 Show fit	0.07	ENSRNOT00000024323	Rnf182 Links NCBI RGD Ensembl Show fit	ring finger protein 182
chr4_-_123713319 Show fit	0.07	ENSRNOT00000012875 ENSRNOT00000086982	Slc6a6 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 6
chr20_+_32509598 Show fit	0.07	ENSRNOT00000046268	Kpna5 Links NCBI RGD Ensembl Show fit	karyopherin subunit alpha 5
chr1_+_213886775 Show fit	0.07	ENSRNOT00000020864	Pkp3 Links NCBI RGD Ensembl Show fit	plakophilin 3
chr12_-_29743705 Show fit	0.06	ENSRNOT00000001185	Caln1 Links NCBI RGD Ensembl Show fit	calneuron 1
chr8_+_99880073 Show fit	0.06	ENSRNOT00000010765	Plscr4 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 4
chr8_-_6305033 Show fit	0.06	ENSRNOT00000029887	Cep126 Links NCBI RGD Ensembl Show fit	centrosomal protein 126
chr5_+_59080765 Show fit	0.06	ENSRNOT00000021888 ENSRNOT00000064419	Rgp1 Links NCBI RGD Ensembl Show fit	RGP1 homolog, RAB6A GEF complex partner 1
chr4_-_177196180 Show fit	0.05	ENSRNOT00000018999	St8sia1 Links NCBI RGD Ensembl Show fit	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
chr7_+_74350479 Show fit	0.05	ENSRNOT00000089034	AABR07057495.1 Links NCBI RGD Ensembl Show fit
chr18_+_29386809 Show fit	0.05	ENSRNOT00000082079 ENSRNOT00000024825	Eif4ebp3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E binding protein 3
chr15_-_61648267 Show fit	0.05	ENSRNOT00000071805	Naa16 Links NCBI RGD Ensembl Show fit	N(alpha)-acetyltransferase 16, NatA auxiliary subunit
chr19_+_38422164 Show fit	0.05	ENSRNOT00000017174	Nqo1 Links NCBI RGD Ensembl Show fit	NAD(P)H quinone dehydrogenase 1
chr4_+_70252366 Show fit	0.05	ENSRNOT00000073039	Chl1 Links NCBI RGD Ensembl Show fit	cell adhesion molecule L1-like
chr10_-_87407634 Show fit	0.04	ENSRNOT00000016657	Krt23 Links NCBI RGD Ensembl Show fit	keratin 23
chr6_+_73358112 Show fit	0.04	ENSRNOT00000041373	Arhgap5 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 5
chr12_-_41590244 Show fit	0.04	ENSRNOT00000038736	Slc8b1 Links NCBI RGD Ensembl Show fit	solute carrier family 8 member B1
chr20_-_3372070 Show fit	0.04	ENSRNOT00000080770	Dhx16 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 16
chr3_-_148057523 Show fit	0.04	ENSRNOT00000055408	Defb24 Links NCBI RGD Ensembl Show fit	defensin beta 24
chr9_+_37462693 Show fit	0.04	ENSRNOT00000016316	Lgsn Links NCBI RGD Ensembl Show fit	lengsin, lens protein with glutamine synthetase domain
chr1_+_62133816 Show fit	0.04	ENSRNOT00000034746	LOC102555377 Links NCBI RGD Ensembl Show fit	zinc finger protein 182-like
chr8_+_69753373 Show fit	0.04	ENSRNOT00000066973	Tipin Links NCBI RGD Ensembl Show fit	timeless interacting protein
chr7_-_134495835 Show fit	0.04	ENSRNOT00000058349	Gxylt1 Links NCBI RGD Ensembl Show fit	glucoside xylosyltransferase 1
chr7_+_20262680 Show fit	0.03	ENSRNOT00000046378	LOC300308 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein 4930509O22
chr8_+_5967463 Show fit	0.03	ENSRNOT00000086251	Tmem123 Links NCBI RGD Ensembl Show fit	transmembrane protein 123
chr1_-_211196868 Show fit	0.03	ENSRNOT00000022714	Mapk1ip1 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 1 interacting protein 1
chr15_+_1054937 Show fit	0.03	ENSRNOT00000008154	AABR07016841.1 Links NCBI RGD Ensembl Show fit
chr16_-_73827488 Show fit	0.03	ENSRNOT00000064070	Ank1 Links NCBI RGD Ensembl Show fit	ankyrin 1
chr8_-_76940094 Show fit	0.03	ENSRNOT00000082709 ENSRNOT00000084313	Rnf111 Links NCBI RGD Ensembl Show fit	ring finger protein 111
chr10_-_73629581 Show fit	0.03	ENSRNOT00000091172	Brip1 Links NCBI RGD Ensembl Show fit	BRCA1 interacting protein C-terminal helicase 1
chr16_-_81693000 Show fit	0.02	ENSRNOT00000092353	Lamp1 Links NCBI RGD Ensembl Show fit	lysosomal-associated membrane protein 1
chr5_+_135351816 Show fit	0.02	ENSRNOT00000082602	Ipp Links NCBI RGD Ensembl Show fit	intracisternal A particle-promoted polypeptide
chrX_+_70438617 Show fit	0.02	ENSRNOT00000076671	Arr3 Links NCBI RGD Ensembl Show fit	arrestin 3
chr15_+_39779648 Show fit	0.02	ENSRNOT00000084505	Cab39l Links NCBI RGD Ensembl Show fit	calcium binding protein 39-like
chr1_+_87790104 Show fit	0.02	ENSRNOT00000074580	LOC103690114 Links NCBI RGD Ensembl Show fit	zinc finger protein 383-like
chr5_-_160620334 Show fit	0.02	ENSRNOT00000019171	Tmem51 Links NCBI RGD Ensembl Show fit	transmembrane protein 51
chr2_-_112802073 Show fit	0.02	ENSRNOT00000093081	Ect2 Links NCBI RGD Ensembl Show fit	epithelial cell transforming 2
chr6_-_98566523 Show fit	0.02	ENSRNOT00000077715	Ppp2r5e Links NCBI RGD Ensembl Show fit	protein phosphatase 2 regulatory subunit B', epsilon
chr14_+_48726045 Show fit	0.02	ENSRNOT00000086646	Arap2 Links NCBI RGD Ensembl Show fit	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr7_+_23012070 Show fit	0.02	ENSRNOT00000042460	LOC300308 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein 4930509O22
chr6_-_107080524 Show fit	0.02	ENSRNOT00000011662	Zfyve1 Links NCBI RGD Ensembl Show fit	zinc finger FYVE-type containing 1
chr9_+_30939555 Show fit	0.02	ENSRNOT00000016887	Lmbrd1 Links NCBI RGD Ensembl Show fit	LMBR1 domain containing 1
chr12_-_5685448 Show fit	0.02	ENSRNOT00000077167	Fry Links NCBI RGD Ensembl Show fit	FRY microtubule binding protein
chr5_-_100970043 Show fit	0.02	ENSRNOT00000013950	Zdhhc21 Links NCBI RGD Ensembl Show fit	zinc finger, DHHC-type containing 21
chr5_+_130286393 Show fit	0.02	ENSRNOT00000044795	Ccp6l1 Links NCBI RGD Ensembl Show fit	cytosolic carboxypeptidase 6-like 1
chr16_+_74534130 Show fit	0.02	ENSRNOT00000050637	Slc25a15 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 15
chr19_-_37952501 Show fit	0.02	ENSRNOT00000026809	Dpep3 Links NCBI RGD Ensembl Show fit	dipeptidase 3
chr10_+_108132105 Show fit	0.02	ENSRNOT00000072534	Cbx2 Links NCBI RGD Ensembl Show fit	chromobox 2
chr6_+_126766967 Show fit	0.02	ENSRNOT00000052296	Cox8c Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 8C
chr8_+_113939886 Show fit	0.02	ENSRNOT00000079562	Aste1 Links NCBI RGD Ensembl Show fit	asteroid homolog 1 (Drosophila)
chr12_-_44999074 Show fit	0.02	ENSRNOT00000079177 ENSRNOT00000038293	Vsig10 Links NCBI RGD Ensembl Show fit	V-set and immunoglobulin domain containing 10
chr14_-_78902063 Show fit	0.02	ENSRNOT00000088469	Ppp2r2c Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B, gamma
chr19_-_52424318 Show fit	0.01	ENSRNOT00000021743	Tldc1 Links NCBI RGD Ensembl Show fit	TBC/LysM-associated domain containing 1
chr20_-_5110191 Show fit	0.01	ENSRNOT00000076597	Csnk2b Links NCBI RGD Ensembl Show fit	casein kinase 2 beta
chr15_-_61772516 Show fit	0.01	ENSRNOT00000015605 ENSRNOT00000093399	Wbp4 Links NCBI RGD Ensembl Show fit	WW domain binding protein 4
chr6_+_8284878 Show fit	0.01	ENSRNOT00000009581	Slc3a1 Links NCBI RGD Ensembl Show fit	solute carrier family 3 member 1
chr3_-_153321352 Show fit	0.01	ENSRNOT00000064824	Rbl1 Links NCBI RGD Ensembl Show fit	RB transcriptional corepressor like 1
chrX_+_128550178 Show fit	0.01	ENSRNOT00000082970	Stag2 Links NCBI RGD Ensembl Show fit	stromal antigen 2
chr3_+_54253949 Show fit	0.01	ENSRNOT00000010018	B3galt1 Links NCBI RGD Ensembl Show fit	Beta-1,3-galactosyltransferase 1
chr6_-_42616548 Show fit	0.01	ENSRNOT00000081433	Atp6v1c2 Links NCBI RGD Ensembl Show fit	ATPase H+ transporting V1 subunit C2
chr1_+_30681681 Show fit	0.01	ENSRNOT00000015395	Rspo3 Links NCBI RGD Ensembl Show fit	R-spondin 3
chr7_-_27552078 Show fit	0.01	ENSRNOT00000059538	Stab2 Links NCBI RGD Ensembl Show fit	stabilin 2
chr9_+_95161157 Show fit	0.01	ENSRNOT00000071200	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr13_-_78521911 Show fit	0.01	ENSRNOT00000087506	Rabgap1l Links NCBI RGD Ensembl Show fit	RAB GTPase activating protein 1-like
chr8_-_116855062 Show fit	0.01	ENSRNOT00000050344	Rnf123 Links NCBI RGD Ensembl Show fit	ring finger protein 123
chr8_-_53362006 Show fit	0.01	ENSRNOT00000077145	LOC100360390 Links NCBI RGD Ensembl Show fit	claudin 25-like
chr15_+_70790125 Show fit	0.01	ENSRNOT00000012440	Tdrd3 Links NCBI RGD Ensembl Show fit	tudor domain containing 3
chr3_-_162581610 Show fit	0.01	ENSRNOT00000079324	Zmynd8 Links NCBI RGD Ensembl Show fit	zinc finger, MYND-type containing 8
chr2_+_165601007 Show fit	0.01	ENSRNOT00000013931	Smc4 Links NCBI RGD Ensembl Show fit	structural maintenance of chromosomes 4
chrX_-_14220662 Show fit	0.01	ENSRNOT00000045753	Srpx Links NCBI RGD Ensembl Show fit	sushi-repeat-containing protein, X-linked
chr10_+_109665682 Show fit	0.01	ENSRNOT00000054963	Slc25a10 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 10
chr7_-_140556639 Show fit	0.01	ENSRNOT00000089523	Rhebl1 Links NCBI RGD Ensembl Show fit	Ras homolog enriched in brain like 1
chrX_+_43626480 Show fit	0.01	ENSRNOT00000068078	Sat1 Links NCBI RGD Ensembl Show fit	spermidine/spermine N1-acetyl transferase 1
chr10_+_83081168 Show fit	0.01	ENSRNOT00000035023	Tac4 Links NCBI RGD Ensembl Show fit	tachykinin 4 (hemokinin)
chr8_+_132120452 Show fit	0.01	ENSRNOT00000055822	Tgm4 Links NCBI RGD Ensembl Show fit	transglutaminase 4
chr5_+_64566804 Show fit	0.01	ENSRNOT00000073192	LOC103690035 Links NCBI RGD Ensembl Show fit	TGF-beta receptor type-1-like
chr7_-_97071968 Show fit	0.01	ENSRNOT00000006596	Slc22a22 Links NCBI RGD Ensembl Show fit	solute carrier family 22 (organic cation transporter), member 22
chr3_-_2490392 Show fit	0.00	ENSRNOT00000014993	Ssna1 Links NCBI RGD Ensembl Show fit	SS nuclear autoantigen 1
chr14_+_81819799 Show fit	0.00	ENSRNOT00000076840	Mxd4 Links NCBI RGD Ensembl Show fit	Max dimerization protein 4
chr7_-_68549763 Show fit	0.00	ENSRNOT00000078014	Slc16a7 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 7
chr12_+_37702404 Show fit	0.00	ENSRNOT00000049985	Mphosph9 Links NCBI RGD Ensembl Show fit	M-phase phosphoprotein 9
chr2_+_68820615 Show fit	0.00	ENSRNOT00000087007 ENSRNOT00000089504	Egf Links NCBI RGD Ensembl Show fit	epidermal growth factor
chr1_+_68239314 Show fit	0.00	ENSRNOT00000070823	Vom1r109 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 109
chr7_+_141237768 Show fit	0.00	ENSRNOT00000091717	Aqp2 Links NCBI RGD Ensembl Show fit	aquaporin 2
chr2_+_68821004 Show fit	0.00	ENSRNOT00000083713	Egf Links NCBI RGD Ensembl Show fit	epidermal growth factor
chr3_+_11207542 Show fit	0.00	ENSRNOT00000013546	Prrc2b Links NCBI RGD Ensembl Show fit	proline-rich coiled-coil 2B
chrX_-_15651332 Show fit	0.00	ENSRNOT00000039000	Gpkow Links NCBI RGD Ensembl Show fit	G patch domain and KOW motifs
chr8_+_22423467 Show fit	0.00	ENSRNOT00000085320	Ilf3 Links NCBI RGD Ensembl Show fit	interleukin enhancer binding factor 3
chr6_-_105097054 Show fit	0.00	ENSRNOT00000048606	Slc8a3 Links NCBI RGD Ensembl Show fit	solute carrier family 8 member A3
chr19_-_59894937 Show fit	0.00	ENSRNOT00000027145	Rbm34 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 34
chr16_+_54765325 Show fit	0.00	ENSRNOT00000065327 ENSRNOT00000086899	Mtmr7 Links NCBI RGD Ensembl Show fit	myotubularin related protein 7
chr5_-_146795866 Show fit	0.00	ENSRNOT00000065640	Tlr12 Links NCBI RGD Ensembl Show fit	toll-like receptor 12
chr3_+_140024043 Show fit	0.00	ENSRNOT00000086409	Rin2 Links NCBI RGD Ensembl Show fit	Ras and Rab interactor 2

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0002159	desmosome assembly(GO:0002159)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0030977	taurine binding(GO:0030977)