GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nfe2l1 Links NCBI RGD Ensembl	ENSRNOG00000008830	nuclear factor, erythroid 2-like 1
Mafg Links NCBI RGD Ensembl	ENSRNOG00000036697	MAF bZIP transcription factor G

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nfe2l1	rn6_v1_chr10_-_84698886_84698886	-0.50	3.9e-01	Click!
Mafg	rn6_v1_chr10_-_109811323_109811323	0.18	7.7e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr15_+_33271015 Show fit	0.05	ENSRNOT00000073767	Psmb11 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 11
chr2_-_77784522 Show fit	0.04	ENSRNOT00000030328	LOC310177 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 0610040D20
chr13_-_103080920 Show fit	0.04	ENSRNOT00000034990	AABR07022022.1 Links NCBI RGD Ensembl Show fit
chr11_-_83483513 Show fit	0.03	ENSRNOT00000084380	AABR07034673.1 Links NCBI RGD Ensembl Show fit
chr17_+_11101306 Show fit	0.03	ENSRNOT00000030893	Drd1 Links NCBI RGD Ensembl Show fit	dopamine receptor D1
chr15_-_28696122 Show fit	0.03	ENSRNOT00000060467	Rab2b Links NCBI RGD Ensembl Show fit	RAB2B, member RAS oncogene family
chr3_-_46726946 Show fit	0.03	ENSRNOT00000011030 ENSRNOT00000086576	Itgb6 Links NCBI RGD Ensembl Show fit	integrin subunit beta 6
chr5_+_154800226 Show fit	0.03	ENSRNOT00000016046	Htr1d Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 1D
chrX_-_70460536 Show fit	0.03	ENSRNOT00000076824	Pdzd11 Links NCBI RGD Ensembl Show fit	PDZ domain containing 11
chr2_+_222792999 Show fit	0.02	ENSRNOT00000036228	AABR07013086.1 Links NCBI RGD Ensembl Show fit
chr6_+_55085313 Show fit	0.02	ENSRNOT00000005458	AABR07063901.1 Links NCBI RGD Ensembl Show fit
chr2_-_252451999 Show fit	0.02	ENSRNOT00000021861	Dnase2b Links NCBI RGD Ensembl Show fit	deoxyribonuclease 2 beta
chrM_+_7006 Show fit	0.02	ENSRNOT00000043693	Mt-co2 Links NCBI RGD Ensembl Show fit	mitochondrially encoded cytochrome c oxidase II
chr3_+_57770948 Show fit	0.02	ENSRNOT00000038429	AC107446.2 Links NCBI RGD Ensembl Show fit
chr10_-_78993045 Show fit	0.02	ENSRNOT00000043005	LOC100363469 Links NCBI RGD Ensembl Show fit	ribosomal protein S24-like
chr10_-_102289837 Show fit	0.02	ENSRNOT00000044922	AABR07030729.1 Links NCBI RGD Ensembl Show fit
chr2_+_263895241 Show fit	0.01	ENSRNOT00000014126 ENSRNOT00000014034	Ptger3 Links NCBI RGD Ensembl Show fit	prostaglandin E receptor 3
chr6_-_135049728 Show fit	0.01	ENSRNOT00000009556	Hsp90aa1 Links NCBI RGD Ensembl Show fit	heat shock protein 90 alpha family class A member 1
chr17_+_47241017 Show fit	0.01	ENSRNOT00000092193	Gpr141 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 141
chr9_+_95221474 Show fit	0.01	ENSRNOT00000066839	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr17_-_27334379 Show fit	0.01	ENSRNOT00000018649	Dsp Links NCBI RGD Ensembl Show fit	desmoplakin
chr14_-_81100803 Show fit	0.01	ENSRNOT00000014692	Msantd1 Links NCBI RGD Ensembl Show fit	Myb/SANT DNA binding domain containing 1
chr11_-_72109964 Show fit	0.01	ENSRNOT00000058917	AABR07034445.1 Links NCBI RGD Ensembl Show fit
chr14_-_77222006 Show fit	0.01	ENSRNOT00000007074	Drd5 Links NCBI RGD Ensembl Show fit	dopamine receptor D5
chr15_+_56666012 Show fit	0.01	ENSRNOT00000013408	Htr2a Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 2A
chr10_-_87248572 Show fit	0.01	ENSRNOT00000066637 ENSRNOT00000085677	Krt26 Links NCBI RGD Ensembl Show fit	keratin 26
chr16_+_54899452 Show fit	0.01	ENSRNOT00000016882	Cnot7 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 7
chr1_+_166991474 Show fit	0.01	ENSRNOT00000027150	LOC100361543 Links NCBI RGD Ensembl Show fit	RhoA activator C11orf59-like
chr20_+_13498926 Show fit	0.01	ENSRNOT00000070992 ENSRNOT00000045375	Slc5a4b Links NCBI RGD Ensembl Show fit	solute carrier family 5 (neutral amino acid transporters, system A), member 4b
chr10_+_57239993 Show fit	0.01	ENSRNOT00000067919	LOC687707 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC687707
chr7_+_54980120 Show fit	0.01	ENSRNOT00000005690 ENSRNOT00000005773	Kcnc2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily C member 2
chr8_+_85489553 Show fit	0.01	ENSRNOT00000082158	Rpl12-ps1 Links NCBI RGD Ensembl Show fit	ribosomal protein L12, pseudogene 1
chr3_+_132052612 Show fit	0.01	ENSRNOT00000030148	AABR07053879.1 Links NCBI RGD Ensembl Show fit
chr10_+_34149717 Show fit	0.01	ENSRNOT00000084232 ENSRNOT00000089829	Rack1 Links NCBI RGD Ensembl Show fit	receptor for activated C kinase 1
chr18_-_63825408 Show fit	0.01	ENSRNOT00000043709	RGD1562758 Links NCBI RGD Ensembl Show fit	similar to glyceraldehyde-3-phosphate dehydrogenase
chr1_+_193537137 Show fit	0.01	ENSRNOT00000029967	AABR07005667.1 Links NCBI RGD Ensembl Show fit
chr17_+_36771639 Show fit	0.01	ENSRNOT00000015147	Gpr50 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 50
chr10_-_78690857 Show fit	0.01	ENSRNOT00000089255	LOC303448 Links NCBI RGD Ensembl Show fit	similar to glyceraldehyde-3-phosphate dehydrogenase
chr3_-_151371501 Show fit	0.01	ENSRNOT00000073178	Fam83c Links NCBI RGD Ensembl Show fit	family with sequence similarity 83, member C
chr10_-_66602987 Show fit	0.01	ENSRNOT00000017949	Wsb1 Links NCBI RGD Ensembl Show fit	WD repeat and SOCS box-containing 1
chr1_-_22559830 Show fit	0.01	ENSRNOT00000047810	Taar4 Links NCBI RGD Ensembl Show fit	trace amine-associated receptor 4
chr3_-_51054378 Show fit	0.01	ENSRNOT00000089243	Grb14 Links NCBI RGD Ensembl Show fit	growth factor receptor bound protein 14
chr2_-_89498395 Show fit	0.01	ENSRNOT00000068507	AABR07009224.1 Links NCBI RGD Ensembl Show fit
chr15_-_52317219 Show fit	0.01	ENSRNOT00000016555	Dmtn Links NCBI RGD Ensembl Show fit	dematin actin binding protein
chr11_+_70687500 Show fit	0.01	ENSRNOT00000037432	AC110981.1 Links NCBI RGD Ensembl Show fit
chr17_-_45746753 Show fit	0.01	ENSRNOT00000077475	RGD1564243 Links NCBI RGD Ensembl Show fit	similar to brain Zn-finger protein
chr3_-_2453933 Show fit	0.01	ENSRNOT00000014060	Slc34a3 Links NCBI RGD Ensembl Show fit	solute carrier family 34 member 3
chr1_+_199019517 Show fit	0.01	ENSRNOT00000025419	Phkg2 Links NCBI RGD Ensembl Show fit	phosphorylase kinase catalytic subunit gamma 2
chr19_+_56179111 Show fit	0.01	ENSRNOT00000046155	Tcf25 Links NCBI RGD Ensembl Show fit	transcription factor 25
chr8_-_72629128 Show fit	0.00	ENSRNOT00000057704 ENSRNOT00000024207 ENSRNOT00000024176	LOC108348064 Links NCBI RGD Ensembl Show fit	gamma-secretase subunit APH-1B-like
chr16_+_16949232 Show fit	0.00	ENSRNOT00000047499	AABR07024795.1 Links NCBI RGD Ensembl Show fit
chr10_-_88000423 Show fit	0.00	ENSRNOT00000076787 ENSRNOT00000046751 ENSRNOT00000091394	Krt32 Links NCBI RGD Ensembl Show fit	keratin 32
chrX_+_88298266 Show fit	0.00	ENSRNOT00000041508	AABR07039936.1 Links NCBI RGD Ensembl Show fit
chr3_-_14019204 Show fit	0.00	ENSRNOT00000072400 ENSRNOT00000092918	Traf1 Links NCBI RGD Ensembl Show fit	TNF receptor-associated factor 1
chr8_-_36410612 Show fit	0.00	ENSRNOT00000091308	Foxred1 Links NCBI RGD Ensembl Show fit	FAD-dependent oxidoreductase domain containing 1
chr14_-_82975263 Show fit	0.00	ENSRNOT00000024165	Slc5a1 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 1
chr6_-_108076186 Show fit	0.00	ENSRNOT00000014814	Fam161b Links NCBI RGD Ensembl Show fit	family with sequence similarity 161, member B
chr7_-_117259791 Show fit	0.00	ENSRNOT00000086550	Plec Links NCBI RGD Ensembl Show fit	plectin
chr7_-_130350570 Show fit	0.00	ENSRNOT00000055805	Odf3b Links NCBI RGD Ensembl Show fit	outer dense fiber of sperm tails 3B
chr5_-_58917822 Show fit	0.00	ENSRNOT00000082554	AABR07048059.1 Links NCBI RGD Ensembl Show fit
chr20_-_13458110 Show fit	0.00	ENSRNOT00000072183	Slc5a4 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 4
chr10_-_19574094 Show fit	0.00	ENSRNOT00000059810	Dock2 Links NCBI RGD Ensembl Show fit	dedicator of cytokinesis 2
chr9_+_50966766 Show fit	0.00	ENSRNOT00000076636	Ercc5 Links NCBI RGD Ensembl Show fit	ERCC excision repair 5, endonuclease
chr6_-_26828972 Show fit	0.00	ENSRNOT00000010932	Emilin1 Links NCBI RGD Ensembl Show fit	elastin microfibril interfacer 1
chr3_-_153321352 Show fit	0.00	ENSRNOT00000064824	Rbl1 Links NCBI RGD Ensembl Show fit	RB transcriptional corepressor like 1
chr12_-_17519954 Show fit	0.00	ENSRNOT00000089418	Sun1 Links NCBI RGD Ensembl Show fit	Sad1 and UNC84 domain containing 1
chr9_+_74124016 Show fit	0.00	ENSRNOT00000019023	Cps1 Links NCBI RGD Ensembl Show fit	carbamoyl-phosphate synthase 1
chr5_+_115649046 Show fit	0.00	ENSRNOT00000041328	LOC108351137 Links NCBI RGD Ensembl Show fit	glyceraldehyde-3-phosphate dehydrogenase
chr9_-_86103158 Show fit	0.00	ENSRNOT00000021528	Cul3 Links NCBI RGD Ensembl Show fit	cullin 3
chr10_-_104482838 Show fit	0.00	ENSRNOT00000007246	Recql5 Links NCBI RGD Ensembl Show fit	RecQ like helicase 5
chr6_+_108076306 Show fit	0.00	ENSRNOT00000014913	Coq6 Links NCBI RGD Ensembl Show fit	coenzyme Q6 monooxygenase
chr13_+_92146586 Show fit	0.00	ENSRNOT00000004659	Olr1588 Links NCBI RGD Ensembl Show fit	olfactory receptor 1588

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Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0001588	dopamine neurotransmitter receptor activity, coupled via Gs(GO:0001588)