GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Pax1 Links NCBI RGD Ensembl	ENSRNOG00000024882	paired box 1
Pax9 Links NCBI RGD Ensembl	ENSRNOG00000008826	paired box 9

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr20_+_13778178 Show fit	0.05	ENSRNOT00000058314	Gstt4 Links NCBI RGD Ensembl Show fit	glutathione S-transferase, theta 4
chr4_+_119815139 Show fit	0.03	ENSRNOT00000083402 ENSRNOT00000016137	Hmces Links NCBI RGD Ensembl Show fit	5-hydroxymethylcytosine (hmC) binding, ES cell-specific
chr6_+_26390689 Show fit	0.02	ENSRNOT00000079762 ENSRNOT00000091528	Ift172 Links NCBI RGD Ensembl Show fit	intraflagellar transport 172
chr8_-_55276070 Show fit	0.02	ENSRNOT00000041555	LOC108351703 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L27a-like
chr3_+_147609095 Show fit	0.02	ENSRNOT00000041456	Srxn1 Links NCBI RGD Ensembl Show fit	sulfiredoxin 1
chr7_+_2435553 Show fit	0.01	ENSRNOT00000065593	Prim1 Links NCBI RGD Ensembl Show fit	primase (DNA) subunit 1
chr3_-_15433252 Show fit	0.01	ENSRNOT00000008817	Lhx6 Links NCBI RGD Ensembl Show fit	LIM homeobox 6
chr8_+_70603249 Show fit	0.01	ENSRNOT00000067016 ENSRNOT00000072486	Igdcc4 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, DCC subclass, member 4
chr3_+_2877293 Show fit	0.01	ENSRNOT00000061855	Lcn5 Links NCBI RGD Ensembl Show fit	lipocalin 5
chr10_-_94488180 Show fit	0.01	ENSRNOT00000015818	Gh1 Links NCBI RGD Ensembl Show fit	growth hormone 1
chr3_+_128828331 Show fit	0.01	ENSRNOT00000045393	Plcb4 Links NCBI RGD Ensembl Show fit	phospholipase C, beta 4
chr1_+_126749508 Show fit	0.01	ENSRNOT00000015845	Pcsk6 Links NCBI RGD Ensembl Show fit	proprotein convertase subtilisin/kexin type 6
chr9_-_65737538 Show fit	0.01	ENSRNOT00000014939	Trak2 Links NCBI RGD Ensembl Show fit	trafficking kinesin protein 2
chr7_+_114724610 Show fit	0.01	ENSRNOT00000014541	Dennd3 Links NCBI RGD Ensembl Show fit	DENN domain containing 3
chr9_-_17880706 Show fit	0.01	ENSRNOT00000031549	Aars2 Links NCBI RGD Ensembl Show fit	alanyl-tRNA synthetase 2, mitochondrial
chr20_+_7484800 Show fit	0.01	ENSRNOT00000081604	Anks1a Links NCBI RGD Ensembl Show fit	ankyrin repeat and sterile alpha motif domain containing 1A
chr20_+_7484550 Show fit	0.00	ENSRNOT00000044395	Anks1a Links NCBI RGD Ensembl Show fit	ankyrin repeat and sterile alpha motif domain containing 1A
chr16_-_24788740 Show fit	0.00	ENSRNOT00000018952	Npy1r Links NCBI RGD Ensembl Show fit	neuropeptide Y receptor Y1
chr12_+_37709860 Show fit	0.00	ENSRNOT00000086244	Mphosph9 Links NCBI RGD Ensembl Show fit	M-phase phosphoprotein 9
chr5_-_173209768 Show fit	0.00	ENSRNOT00000045053	Atad3a Links NCBI RGD Ensembl Show fit	ATPase family, AAA domain containing 3A
chr16_-_24788456 Show fit	0.00	ENSRNOT00000079412	Npy1r Links NCBI RGD Ensembl Show fit	neuropeptide Y receptor Y1
chrX_+_118084890 Show fit	0.00	ENSRNOT00000065293	Htr2c Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 2C
chr7_-_12634641 Show fit	0.00	ENSRNOT00000093132	Cfd Links NCBI RGD Ensembl Show fit	complement factor D
chr1_-_220502272 Show fit	0.00	ENSRNOT00000041238	Klc2 Links NCBI RGD Ensembl Show fit	kinesin light chain 2
chr7_-_11319516 Show fit	0.00	ENSRNOT00000027784	Apba3 Links NCBI RGD Ensembl Show fit	amyloid beta precursor protein binding family A member 3
chr17_+_54280851 Show fit	0.00	ENSRNOT00000024022	Arhgap12 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 12
chr9_-_15628881 Show fit	0.00	ENSRNOT00000077318 ENSRNOT00000020950	Guca1b Links NCBI RGD Ensembl Show fit	guanylate cyclase activator 1B
chr18_-_1946840 Show fit	0.00	ENSRNOT00000041878	Abhd3 Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 3
chr3_-_5802129 Show fit	0.00	ENSRNOT00000009555	Sardh Links NCBI RGD Ensembl Show fit	sarcosine dehydrogenase
chr5_-_50068706 Show fit	0.00	ENSRNOT00000084643	Orc3 Links NCBI RGD Ensembl Show fit	origin recognition complex, subunit 3
chr9_-_53732858 Show fit	0.00	ENSRNOT00000029204	Nemp2 Links NCBI RGD Ensembl Show fit	nuclear envelope integral membrane protein 2

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