GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Pgr Links NCBI RGD Ensembl	ENSRNOG00000006831	progesterone receptor
Nr3c1 Links NCBI RGD Ensembl	ENSRNOG00000014096	nuclear receptor subfamily 3, group C, member 1
Nr3c1 Links NCBI RGD Ensembl	ENSRNOG00000048800	nuclear receptor subfamily 3, group C, member 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nr3c1	rn6_v1_chr18_-_31749647_31749647	0.25	6.8e-01	Click!
Pgr	rn6_v1_chr8_+_7128656_7128656	-0.09	8.9e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr13_+_52624878 Show fit	0.02	ENSRNOT00000076054 ENSRNOT00000076299	Tnni1 Links NCBI RGD Ensembl Show fit	troponin I1, slow skeletal type
chr10_+_31324512 Show fit	0.02	ENSRNOT00000008559	Fndc9 Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 9
chr5_-_60191941 Show fit	0.01	ENSRNOT00000033373	Pax5 Links NCBI RGD Ensembl Show fit	paired box 5
chr13_+_49003803 Show fit	0.01	ENSRNOT00000080556	Lemd1 Links NCBI RGD Ensembl Show fit	LEM domain containing 1
chr8_+_91099491 Show fit	0.01	ENSRNOT00000084852	Sh3bgrl2 Links NCBI RGD Ensembl Show fit	SH3 domain binding glutamate-rich protein like 2
chr2_+_184230459 Show fit	0.01	ENSRNOT00000074187	AABR07012054.1 Links NCBI RGD Ensembl Show fit
chr16_+_3293599 Show fit	0.01	ENSRNOT00000081999 ENSRNOT00000047118 ENSRNOT00000020427	Erc2 Links NCBI RGD Ensembl Show fit	ELKS/RAB6-interacting/CAST family member 2
chr2_-_184993341 Show fit	0.01	ENSRNOT00000071580	Fam160a1 Links NCBI RGD Ensembl Show fit	family with sequence similarity 160, member A1
chr1_-_169534896 Show fit	0.01	ENSRNOT00000082645	Trim30c Links NCBI RGD Ensembl Show fit	tripartite motif-containing 30C
chr10_+_5199226 Show fit	0.01	ENSRNOT00000003544	Dexi Links NCBI RGD Ensembl Show fit	dexamethasone-induced transcript
chr15_-_36798814 Show fit	0.00	ENSRNOT00000065764	Cenpj Links NCBI RGD Ensembl Show fit	centromere protein J
chr9_+_17705212 Show fit	0.00	ENSRNOT00000026728	Tmem63b Links NCBI RGD Ensembl Show fit	transmembrane protein 63B
chr15_+_58016238 Show fit	0.00	ENSRNOT00000075786	Kctd4 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 4
chr11_+_43143882 Show fit	0.00	ENSRNOT00000041445	Olr1528 Links NCBI RGD Ensembl Show fit	olfactory receptor 1528
chr10_+_92628356 Show fit	0.00	ENSRNOT00000072480	Myl4 Links NCBI RGD Ensembl Show fit	myosin, light chain 4
chr20_-_5123073 Show fit	0.00	ENSRNOT00000001126	Apom Links NCBI RGD Ensembl Show fit	apolipoprotein M
chr2_+_116970344 Show fit	0.00	ENSRNOT00000039603	Egfem1 Links NCBI RGD Ensembl Show fit	EGF-like and EMI domain containing 1
chr14_-_44845218 Show fit	0.00	ENSRNOT00000004003	Klhl5 Links NCBI RGD Ensembl Show fit	kelch-like family member 5
chr15_+_83707735 Show fit	0.00	ENSRNOT00000057843	Klf5 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 5
chr4_+_71621729 Show fit	0.00	ENSRNOT00000022275	Gstk1 Links NCBI RGD Ensembl Show fit	glutathione S-transferase kappa 1
chr7_+_127964752 Show fit	0.00	ENSRNOT00000038168	RGD1560617 Links NCBI RGD Ensembl Show fit	hypothetical gene supported by NM_053561; AF062594
chr8_+_1459526 Show fit	0.00	ENSRNOT00000034503	Kbtbd3 Links NCBI RGD Ensembl Show fit	kelch repeat and BTB domain containing 3
chr7_-_104556419 Show fit	0.00	ENSRNOT00000090784	Fam49b Links NCBI RGD Ensembl Show fit	family with sequence similarity 49, member B
chr17_+_81280898 Show fit	0.00	ENSRNOT00000057785	Tmem236 Links NCBI RGD Ensembl Show fit	transmembrane protein 236
chr7_-_125497691 Show fit	0.00	ENSRNOT00000049445	AABR07058578.1 Links NCBI RGD Ensembl Show fit
chr7_-_140291620 Show fit	0.00	ENSRNOT00000088323	Adcy6 Links NCBI RGD Ensembl Show fit	adenylate cyclase 6
chr16_+_21132147 Show fit	0.00	ENSRNOT00000084243 ENSRNOT00000027846	Mau2 Links NCBI RGD Ensembl Show fit	MAU2 sister chromatid cohesion factor
chrX_+_112311251 Show fit	0.00	ENSRNOT00000086698	AABR07040855.1 Links NCBI RGD Ensembl Show fit
chr5_-_65073012 Show fit	0.00	ENSRNOT00000007957	Grin3a Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor NMDA type subunit 3A

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