GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Pou3f3 Links NCBI RGD Ensembl	ENSRNOG00000038909	POU class 3 homeobox 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Pou3f3	rn6_v1_chr9_+_49479023_49479137	0.44	4.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_219964429 Show fit	0.03	ENSRNOT00000088288	Sptbn2 Links NCBI RGD Ensembl Show fit	spectrin, beta, non-erythrocytic 2
chr15_-_62200837 Show fit	0.02	ENSRNOT00000017599	Pcdh8 Links NCBI RGD Ensembl Show fit	protocadherin 8
chr9_+_2190915 Show fit	0.02	ENSRNOT00000077417	Satb1 Links NCBI RGD Ensembl Show fit	SATB homeobox 1
chr3_-_148312420 Show fit	0.02	ENSRNOT00000047416 ENSRNOT00000081272	Bcl2l1 Links NCBI RGD Ensembl Show fit	Bcl2-like 1
chr10_+_61685645 Show fit	0.02	ENSRNOT00000003933	Mnt Links NCBI RGD Ensembl Show fit	MAX network transcriptional repressor
chr13_+_85818427 Show fit	0.02	ENSRNOT00000077227 ENSRNOT00000006117	Rxrg Links NCBI RGD Ensembl Show fit	retinoid X receptor gamma
chr3_-_148312791 Show fit	0.02	ENSRNOT00000091419	Bcl2l1 Links NCBI RGD Ensembl Show fit	Bcl2-like 1
chr5_+_145257714 Show fit	0.02	ENSRNOT00000019214	Dlgap3 Links NCBI RGD Ensembl Show fit	DLG associated protein 3
chr2_+_182723854 Show fit	0.01	ENSRNOT00000012658	Sfrp2 Links NCBI RGD Ensembl Show fit	secreted frizzled-related protein 2
chr2_-_251970768 Show fit	0.01	ENSRNOT00000020141	Wdr63 Links NCBI RGD Ensembl Show fit	WD repeat domain 63
chr4_-_11610518 Show fit	0.01	ENSRNOT00000066643	Magi2 Links NCBI RGD Ensembl Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr12_-_45801842 Show fit	0.01	ENSRNOT00000078837	AABR07036513.1 Links NCBI RGD Ensembl Show fit
chr14_+_114152472 Show fit	0.01	ENSRNOT00000042965	Rtn4 Links NCBI RGD Ensembl Show fit	reticulon 4
chr3_-_2431148 Show fit	0.01	ENSRNOT00000012978	Nelfb Links NCBI RGD Ensembl Show fit	negative elongation factor complex member B
chr4_+_138269142 Show fit	0.01	ENSRNOT00000007788	Cntn4 Links NCBI RGD Ensembl Show fit	contactin 4
chr2_-_227207584 Show fit	0.01	ENSRNOT00000065361 ENSRNOT00000080215	Myoz2 Links NCBI RGD Ensembl Show fit	myozenin 2
chr4_+_163112301 Show fit	0.01	ENSRNOT00000087113	Clec12a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 12, member A
chr17_-_28191436 Show fit	0.01	ENSRNOT00000000149	Ly86 Links NCBI RGD Ensembl Show fit	lymphocyte antigen 86
chr7_+_44009069 Show fit	0.01	ENSRNOT00000005523	Mgat4c Links NCBI RGD Ensembl Show fit	MGAT4 family, member C
chr2_-_250805445 Show fit	0.00	ENSRNOT00000055362	Clca4l Links NCBI RGD Ensembl Show fit	chloride channel calcium activated 4-like
chr3_+_2396143 Show fit	0.00	ENSRNOT00000012388	Nrarp Links NCBI RGD Ensembl Show fit	Notch-regulated ankyrin repeat protein
chr3_+_8873933 Show fit	0.00	ENSRNOT00000030996	Nup188 Links NCBI RGD Ensembl Show fit	nucleoporin 188
chr7_-_93502571 Show fit	0.00	ENSRNOT00000077033 ENSRNOT00000076080	Samd12 Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 12
chr1_-_101819478 Show fit	0.00	ENSRNOT00000056181	Grwd1 Links NCBI RGD Ensembl Show fit	glutamate-rich WD repeat containing 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:1905218	cellular response to astaxanthin(GO:1905218)