GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Prdm14 Links NCBI RGD Ensembl	ENSRNOG00000021792	PR/SET domain 14

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_-_189573280 Show fit	0.03	ENSRNOT00000022897	Rps27 Links NCBI RGD Ensembl Show fit	ribosomal protein S27
chr2_-_35104963 Show fit	0.02	ENSRNOT00000018058	Rgs7bp Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 7-binding protein
chr14_-_18862407 Show fit	0.02	ENSRNOT00000003823	Cxcl6 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 6
chr2_-_25235275 Show fit	0.02	ENSRNOT00000061580	F2rl1 Links NCBI RGD Ensembl Show fit	F2R like trypsin receptor 1
chr10_-_65963932 Show fit	0.01	ENSRNOT00000011726	Nlk Links NCBI RGD Ensembl Show fit	nemo like kinase
chr10_-_16689321 Show fit	0.01	ENSRNOT00000028173	Bnip1 Links NCBI RGD Ensembl Show fit	BCL2/adenovirus E1B interacting protein 1
chr20_+_7330250 Show fit	0.01	ENSRNOT00000090993	LOC499407 Links NCBI RGD Ensembl Show fit	LRRGT00097
chr20_-_28814636 Show fit	0.01	ENSRNOT00000086030	Sept10 Links NCBI RGD Ensembl Show fit	septin 10
chr3_-_147481073 Show fit	0.01	ENSRNOT00000084722	Fam110a Links NCBI RGD Ensembl Show fit	family with sequence similarity 110, member A
chr20_-_4542073 Show fit	0.01	ENSRNOT00000000477	Cfb Links NCBI RGD Ensembl Show fit	complement factor B
chr2_-_210809306 Show fit	0.01	ENSRNOT00000047139	Gstm1 Links NCBI RGD Ensembl Show fit	glutathione S-transferase mu 1
chr2_-_179704629 Show fit	0.01	ENSRNOT00000083361 ENSRNOT00000077941	Gria2 Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor AMPA type subunit 2
chr9_+_95241609 Show fit	0.01	ENSRNOT00000032634 ENSRNOT00000077416	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr19_+_15339152 Show fit	0.01	ENSRNOT00000060929	Ces1a Links NCBI RGD Ensembl Show fit	carboxylesterase 1A
chrX_-_138435391 Show fit	0.01	ENSRNOT00000043258	Mbnl3 Links NCBI RGD Ensembl Show fit	muscleblind-like splicing regulator 3
chr8_+_130350510 Show fit	0.01	ENSRNOT00000073376	Ss18l2 Links NCBI RGD Ensembl Show fit	SS18 like 2
chr6_+_137164535 Show fit	0.01	ENSRNOT00000018225	Inf2 Links NCBI RGD Ensembl Show fit	inverted formin, FH2 and WH2 domain containing
chr3_+_2158995 Show fit	0.01	ENSRNOT00000010270	Zmynd19 Links NCBI RGD Ensembl Show fit	zinc finger, MYND-type containing 19
chr4_+_78496043 Show fit	0.01	ENSRNOT00000059136	Aoc1 Links NCBI RGD Ensembl Show fit	amine oxidase, copper containing 1
chr13_+_100980574 Show fit	0.01	ENSRNOT00000067005 ENSRNOT00000004649	Capn8 Links NCBI RGD Ensembl Show fit	calpain 8
chr8_-_53816447 Show fit	0.01	ENSRNOT00000011454	Ttc12 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 12
chr13_+_78805347 Show fit	0.01	ENSRNOT00000003748	Serpinc1 Links NCBI RGD Ensembl Show fit	serpin family C member 1
chr18_-_69780922 Show fit	0.01	ENSRNOT00000079093	Me2 Links NCBI RGD Ensembl Show fit	malic enzyme 2
chr12_+_7081895 Show fit	0.01	ENSRNOT00000047163	Hmgb1 Links NCBI RGD Ensembl Show fit	high mobility group box 1
chr5_+_145079803 Show fit	0.01	ENSRNOT00000084202	Sfpq Links NCBI RGD Ensembl Show fit	splicing factor proline and glutamine rich
chr7_-_116920507 Show fit	0.01	ENSRNOT00000048363	Mroh6 Links NCBI RGD Ensembl Show fit	maestro heat-like repeat family member 6
chr8_+_55202725 Show fit	0.01	ENSRNOT00000029166	Alg9 Links NCBI RGD Ensembl Show fit	ALG9, alpha-1,2-mannosyltransferase
chr2_-_188645196 Show fit	0.01	ENSRNOT00000083793	Efna3 Links NCBI RGD Ensembl Show fit	ephrin A3
chrX_-_14972675 Show fit	0.00	ENSRNOT00000079664	Slc38a5 Links NCBI RGD Ensembl Show fit	solute carrier family 38, member 5
chr1_-_102826965 Show fit	0.00	ENSRNOT00000078692	Saa4 Links NCBI RGD Ensembl Show fit	serum amyloid A4
chr17_-_11916026 Show fit	0.00	ENSRNOT00000046385	RGD1561671 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2900010M23
chr1_+_271229036 Show fit	0.00	ENSRNOT00000064023	LOC103690044 Links NCBI RGD Ensembl Show fit	glutathione S-transferase omega-2
chrX_-_14972389 Show fit	0.00	ENSRNOT00000038068	Slc38a5 Links NCBI RGD Ensembl Show fit	solute carrier family 38, member 5
chr4_+_100218661 Show fit	0.00	ENSRNOT00000079415	Tmem150a Links NCBI RGD Ensembl Show fit	transmembrane protein 150A
chr1_-_88111293 Show fit	0.00	ENSRNOT00000077195	Spred3 Links NCBI RGD Ensembl Show fit	sprouty-related, EVH1 domain containing 3
chr1_-_225128740 Show fit	0.00	ENSRNOT00000026897	Rom1 Links NCBI RGD Ensembl Show fit	retinal outer segment membrane protein 1
chr7_-_109205354 Show fit	0.00	ENSRNOT00000068291	Zfat Links NCBI RGD Ensembl Show fit	zinc finger and AT hook domain containing
chr3_+_112950890 Show fit	0.00	ENSRNOT00000015472	Ccndbp1 Links NCBI RGD Ensembl Show fit	cyclin D1 binding protein 1
chr1_+_184301493 Show fit	0.00	ENSRNOT00000078096	Insc Links NCBI RGD Ensembl Show fit	inscuteable homolog (Drosophila)
chr3_-_22459257 Show fit	0.00	ENSRNOT00000091747	Dennd1a Links NCBI RGD Ensembl Show fit	DENN domain containing 1A
chr2_+_1410934 Show fit	0.00	ENSRNOT00000013625 ENSRNOT00000080222	Erap1 Links NCBI RGD Ensembl Show fit	endoplasmic reticulum aminopeptidase 1

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0070949	regulation of neutrophil mediated cytotoxicity(GO:0070948) regulation of neutrophil mediated killing of symbiont cell(GO:0070949)