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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Smad2
Z-value: 0.17
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Transcription factors associated with Smad2
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
Smad2
|
ENSRNOG00000018140 | SMAD family member 2 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Smad2 | rn6_v1_chr18_+_72571327_72571327 | 0.82 | 9.1e-02 | Click! |
Activity profile of Smad2 motif
Sorted Z-values of Smad2 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr14_+_87312203 | 0.08 |
ENSRNOT00000088032
|
Adcy1
|
adenylate cyclase 1 |
| chr17_+_81798756 | 0.05 |
ENSRNOT00000066826
|
Cacnb2
|
calcium voltage-gated channel auxiliary subunit beta 2 |
| chr7_+_97559841 | 0.04 |
ENSRNOT00000007326
|
Zhx2
|
zinc fingers and homeoboxes 2 |
| chr18_+_30864216 | 0.04 |
ENSRNOT00000027015
|
Pcdhga7
|
protocadherin gamma subfamily A, 7 |
| chr2_+_186872520 | 0.04 |
ENSRNOT00000021577
ENSRNOT00000093312 |
Etv3
|
ets variant 3 |
| chr7_-_139318455 | 0.04 |
ENSRNOT00000092029
|
Hdac7
|
histone deacetylase 7 |
| chr2_-_40386669 | 0.03 |
ENSRNOT00000014074
|
Elovl7
|
ELOVL fatty acid elongase 7 |
| chr1_-_101046208 | 0.03 |
ENSRNOT00000091711
|
Prr12
|
proline rich 12 |
| chr3_+_172155496 | 0.03 |
ENSRNOT00000066279
|
Stx16
|
syntaxin 16 |
| chr4_-_117575154 | 0.03 |
ENSRNOT00000075813
|
LOC102556148
|
probable N-acetyltransferase CML2-like |
| chr1_+_185427736 | 0.03 |
ENSRNOT00000064706
|
Plekha7
|
pleckstrin homology domain containing A7 |
| chr4_+_157523110 | 0.03 |
ENSRNOT00000081640
|
Zfp384
|
zinc finger protein 384 |
| chr13_-_91872954 | 0.02 |
ENSRNOT00000004613
ENSRNOT00000079263 |
Cadm3
|
cell adhesion molecule 3 |
| chr6_+_27768943 | 0.02 |
ENSRNOT00000015820
|
Kif3c
|
kinesin family member 3C |
| chr18_-_77579969 | 0.02 |
ENSRNOT00000034896
|
Sall3
|
spalt-like transcription factor 3 |
| chr4_+_157523770 | 0.02 |
ENSRNOT00000055985
ENSRNOT00000023240 |
Zfp384
|
zinc finger protein 384 |
| chr5_+_136683592 | 0.01 |
ENSRNOT00000085527
|
Slc6a9
|
solute carrier family 6 member 9 |
| chr4_+_157523320 | 0.01 |
ENSRNOT00000023192
|
Zfp384
|
zinc finger protein 384 |
| chr5_-_137372524 | 0.01 |
ENSRNOT00000009061
|
Tmem125
|
transmembrane protein 125 |
| chr13_+_106463368 | 0.01 |
ENSRNOT00000003489
|
Esrrg
|
estrogen-related receptor gamma |
| chr13_+_52147555 | 0.01 |
ENSRNOT00000084766
|
Lmod1
|
leiomodin 1 |
| chr8_+_132553218 | 0.01 |
ENSRNOT00000006554
|
Limd1
|
LIM domains containing 1 |
| chr2_-_220535751 | 0.01 |
ENSRNOT00000089082
|
Palmd
|
palmdelphin |
| chr2_-_184263564 | 0.00 |
ENSRNOT00000015279
|
Fbxw7
|
F-box and WD repeat domain containing 7 |
| chr7_-_140454268 | 0.00 |
ENSRNOT00000081468
|
Wnt10b
|
wingless-type MMTV integration site family, member 10B |
| chr5_+_58393603 | 0.00 |
ENSRNOT00000080082
|
Dnajb5
|
DnaJ heat shock protein family (Hsp40) member B5 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Smad2
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.0 | GO:1904879 | positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1904879) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0008294 | calcium- and calmodulin-responsive adenylate cyclase activity(GO:0008294) |