GSE49485: Hypoxia transcriptome sequencing of rat brain.
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Sox17
|
ENSRNOG00000027357 | SRY box 17 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sox17 | rn6_v1_chr5_+_14890408_14890408 | -0.49 | 4.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr15_+_32386816 | 0.04 |
ENSRNOT00000060322
|
AABR07017901.1
|
|
chr3_-_119075606 | 0.04 |
ENSRNOT00000041569
ENSRNOT00000086724 |
Hdc
|
histidine decarboxylase |
chr19_+_44164935 | 0.04 |
ENSRNOT00000048998
|
Gabarapl2
|
GABA type A receptor associated protein like 2 |
chr2_+_118547190 | 0.03 |
ENSRNOT00000083676
ENSRNOT00000090301 ENSRNOT00000013410 |
Kcnmb2
|
potassium calcium-activated channel subfamily M regulatory beta subunit 2 |
chr9_+_52393779 | 0.03 |
ENSRNOT00000072809
|
RGD1564617
|
similar to large subunit ribosomal protein L36a |
chr18_-_7081356 | 0.03 |
ENSRNOT00000021253
|
Chst9
|
carbohydrate sulfotransferase 9 |
chr6_-_123577695 | 0.03 |
ENSRNOT00000006604
|
Foxn3
|
forkhead box N3 |
chr13_-_47916185 | 0.03 |
ENSRNOT00000087793
|
Dyrk3
|
dual specificity tyrosine phosphorylation regulated kinase 3 |
chr15_+_33069382 | 0.03 |
ENSRNOT00000060193
|
Mrpl52
|
mitochondrial ribosomal protein L52 |
chr7_-_143956668 | 0.02 |
ENSRNOT00000018809
|
Aaas
|
aladin WD repeat nucleoporin |
chrX_+_29504349 | 0.02 |
ENSRNOT00000005981
|
Tceanc
|
transcription elongation factor A N-terminal and central domain containing |
chr10_-_34961349 | 0.02 |
ENSRNOT00000004885
|
LOC103689931
|
heterogeneous nuclear ribonucleoprotein A/B |
chr9_+_15582564 | 0.02 |
ENSRNOT00000020640
|
LOC100912849
|
uncharacterized LOC100912849 |
chr10_-_34961608 | 0.02 |
ENSRNOT00000033056
|
LOC103689931
|
heterogeneous nuclear ribonucleoprotein A/B |
chr3_+_176691329 | 0.02 |
ENSRNOT00000017319
|
Ppdpf
|
pancreatic progenitor cell differentiation and proliferation factor |
chr10_+_104952458 | 0.02 |
ENSRNOT00000074082
|
RGD1559482
|
similar to immunoglobulin superfamily, member 7 |
chr3_+_94035905 | 0.02 |
ENSRNOT00000014767
|
RGD1563222
|
similar to RIKEN cDNA A930018P22 |
chrX_-_104726816 | 0.02 |
ENSRNOT00000005165
|
Tspan6
|
tetraspanin 6 |
chr3_-_45169118 | 0.02 |
ENSRNOT00000086371
|
Ccdc148
|
coiled-coil domain containing 148 |
chr9_-_73871888 | 0.02 |
ENSRNOT00000017686
|
Acadl
|
acyl-CoA dehydrogenase, long chain |
chr10_-_37055282 | 0.02 |
ENSRNOT00000086193
ENSRNOT00000065584 |
Hnrnpab
|
heterogeneous nuclear ribonucleoprotein A/B |
chr2_-_122756842 | 0.02 |
ENSRNOT00000080181
|
Ccdc144b
|
coiled-coil domain containing 144B |
chrX_+_106360393 | 0.02 |
ENSRNOT00000004260
|
Gprasp2
|
G protein-coupled receptor associated sorting protein 2 |
chr3_-_149356160 | 0.02 |
ENSRNOT00000037589
ENSRNOT00000081775 |
Sun5
|
Sad1 and UNC84 domain containing 5 |
chr16_+_18648866 | 0.02 |
ENSRNOT00000014862
|
Dydc1
|
DPY30 domain containing 1 |
chr3_+_15379109 | 0.02 |
ENSRNOT00000036495
|
Morn5
|
MORN repeat containing 5 |
chr6_-_111477090 | 0.01 |
ENSRNOT00000016389
|
Alkbh1
|
alkB homolog 1, histone H2A dioxygenase |
chr4_+_157726941 | 0.01 |
ENSRNOT00000025081
|
Vamp1
|
vesicle-associated membrane protein 1 |
chr16_+_51748970 | 0.01 |
ENSRNOT00000059182
|
Adam26a
|
a disintegrin and metallopeptidase domain 26A |
chr20_-_11556312 | 0.01 |
ENSRNOT00000091856
|
RGD1561557
|
similar to chromosome 21 open reading frame 29 |
chr5_-_77903062 | 0.01 |
ENSRNOT00000073954
ENSRNOT00000059320 ENSRNOT00000089382 ENSRNOT00000076074 ENSRNOT00000074349 |
LOC100912565
Rn50_5_0814.4
|
major urinary protein-like alpha2u globulin (LOC298111), mRNA |
chr3_-_15379381 | 0.01 |
ENSRNOT00000084069
|
Ndufa8
|
NADH:ubiquinone oxidoreductase subunit A8 |
chr1_+_215666628 | 0.01 |
ENSRNOT00000040598
ENSRNOT00000066135 ENSRNOT00000051425 ENSRNOT00000080339 ENSRNOT00000066896 ENSRNOT00000063918 |
Tnnt3
|
troponin T3, fast skeletal type |
chr10_-_56935141 | 0.01 |
ENSRNOT00000025910
|
Alox12e
|
arachidonate 12-lipoxygenase, epidermal |
chr17_-_69827112 | 0.01 |
ENSRNOT00000023835
|
Akr1c14
|
aldo-keto reductase family 1, member C14 |
chr14_-_21944921 | 0.01 |
ENSRNOT00000060273
|
Csn1s2a
|
casein alpha s2-like A |
chr15_+_18332910 | 0.01 |
ENSRNOT00000085822
|
Fam3d
|
family with sequence similarity 3, member D |
chr10_+_35537977 | 0.01 |
ENSRNOT00000071917
|
Rnf130
|
ring finger protein 130 |
chr4_-_178441547 | 0.01 |
ENSRNOT00000087434
ENSRNOT00000055542 |
Sox5
|
SRY box 5 |
chr2_+_118546829 | 0.01 |
ENSRNOT00000079254
|
Kcnmb2
|
potassium calcium-activated channel subfamily M regulatory beta subunit 2 |
chr7_-_70480724 | 0.01 |
ENSRNOT00000090057
|
Dtx3
|
deltex E3 ubiquitin ligase 3 |
chr4_-_163762434 | 0.01 |
ENSRNOT00000081854
|
Ly49si1
|
immunoreceptor Ly49si1 |
chr10_+_4953879 | 0.01 |
ENSRNOT00000003455
|
Tnp2
|
transition protein 2 |
chrX_-_1369384 | 0.01 |
ENSRNOT00000013745
|
Timp1
|
TIMP metallopeptidase inhibitor 1 |
chr4_+_153805993 | 0.01 |
ENSRNOT00000056174
|
Usp18
|
ubiquitin specific peptidase 18 |
chr6_+_73358112 | 0.01 |
ENSRNOT00000041373
|
Arhgap5
|
Rho GTPase activating protein 5 |
chr8_+_4440876 | 0.01 |
ENSRNOT00000049325
ENSRNOT00000076529 ENSRNOT00000076748 |
Pdgfd
|
platelet derived growth factor D |
chr10_+_15697227 | 0.01 |
ENSRNOT00000028008
|
Il9r
|
interleukin 9 receptor |
chr4_-_79989572 | 0.01 |
ENSRNOT00000013264
ENSRNOT00000086453 |
Dfna5
|
deafness, autosomal dominant 5 (human) |
chr3_-_80052953 | 0.01 |
ENSRNOT00000018998
|
Ddb2
|
damage specific DNA binding protein 2 |
chr6_+_64808238 | 0.01 |
ENSRNOT00000093195
|
Nrcam
|
neuronal cell adhesion molecule |
chr14_+_69800156 | 0.01 |
ENSRNOT00000072746
|
Lcorl
|
ligand dependent nuclear receptor corepressor-like |
chr13_+_95983809 | 0.01 |
ENSRNOT00000078258
|
AABR07021863.1
|
|
chr11_-_71523267 | 0.01 |
ENSRNOT00000033026
|
Zdhhc19
|
zinc finger, DHHC-type containing 19 |
chr7_+_10962330 | 0.01 |
ENSRNOT00000008360
|
Tle6
|
transducin-like enhancer of split 6 |
chr10_+_23914894 | 0.01 |
ENSRNOT00000071435
|
Ebf1
|
early B-cell factor 1 |
chr2_+_180936688 | 0.01 |
ENSRNOT00000016039
|
Asic5
|
acid sensing ion channel subunit family member 5 |
chr2_-_149088787 | 0.01 |
ENSRNOT00000064833
|
Clrn1
|
clarin 1 |
chr4_-_164015365 | 0.01 |
ENSRNOT00000078121
|
Ly49si2
|
immunoreceptor Ly49si2 |
chr9_-_50820290 | 0.01 |
ENSRNOT00000050748
|
LOC102548013
|
uncharacterized LOC102548013 |
chr6_+_123034304 | 0.01 |
ENSRNOT00000078938
|
Cpg1
|
candidate plasticity gene 1 |
chr9_-_15582556 | 0.01 |
ENSRNOT00000020516
|
RGD1561662
|
similar to AI661453 protein |
chr8_-_27907911 | 0.01 |
ENSRNOT00000010045
|
Glb1l3
|
galactosidase, beta 1-like 3 |
chr1_-_228263198 | 0.01 |
ENSRNOT00000028572
|
Olr1874
|
olfactory receptor 1874 |
chr1_+_174330695 | 0.01 |
ENSRNOT00000018497
|
Akip1
|
A-kinase interacting protein 1 |
chr14_-_21299068 | 0.01 |
ENSRNOT00000065778
|
Amtn
|
amelotin |
chr5_-_77492013 | 0.01 |
ENSRNOT00000012293
|
LOC259245
|
alpha-2u globulin PGCL5 |
chr2_+_92549479 | 0.01 |
ENSRNOT00000082912
|
tGap1
|
GTPase activating protein testicular GAP1 |
chr1_+_83626639 | 0.01 |
ENSRNOT00000028261
|
Cyp2g1
|
cytochrome P450, family 2, subfamily g, polypeptide 1 |
chr19_+_38669230 | 0.01 |
ENSRNOT00000027273
|
Cdh3
|
cadherin 3 |
chr7_-_132757558 | 0.01 |
ENSRNOT00000021153
|
Slc2a13
|
solute carrier family 2 member 13 |
chr11_+_62584959 | 0.01 |
ENSRNOT00000071065
|
Gramd1c
|
GRAM domain containing 1C |
chr1_-_62114672 | 0.01 |
ENSRNOT00000072607
|
AABR07001923.1
|
|
chr15_-_29360198 | 0.01 |
ENSRNOT00000072745
|
LOC688340
|
T-cell receptor alpha chain V region PHDS58-like |
chr1_+_163663407 | 0.01 |
ENSRNOT00000088873
|
Thap12
|
THAP domain containing 12 |
chr13_-_68360664 | 0.01 |
ENSRNOT00000030971
|
Hmcn1
|
hemicentin 1 |
chr3_+_44806106 | 0.01 |
ENSRNOT00000035158
|
Upp2
|
uridine phosphorylase 2 |
chr1_+_64849657 | 0.01 |
ENSRNOT00000081724
ENSRNOT00000086867 |
Vom2r12
|
vomeronasal 2 receptor, 12 |
chr7_+_130357643 | 0.01 |
ENSRNOT00000040769
|
Klhdc7b
|
kelch domain containing 7B |
chr4_+_156050054 | 0.01 |
ENSRNOT00000039855
|
Clec4a
|
C-type lectin domain family 4, member A |
chr6_+_111476768 | 0.01 |
ENSRNOT00000016479
|
Slirp
|
SRA stem-loop interacting RNA binding protein |
chrX_+_135550834 | 0.01 |
ENSRNOT00000048922
|
Rbmx2
|
RNA binding motif protein, X-linked 2 |
chr1_+_87180624 | 0.01 |
ENSRNOT00000056933
ENSRNOT00000027987 |
LOC103689986
|
protein YIF1B |
chr19_-_17045349 | 0.01 |
ENSRNOT00000086829
|
Fto
|
FTO, alpha-ketoglutarate dependent dioxygenase |
chr4_-_16669368 | 0.01 |
ENSRNOT00000007608
|
Pclo
|
piccolo (presynaptic cytomatrix protein) |
chr10_+_104997205 | 0.01 |
ENSRNOT00000074003
|
RGD1561778
|
similar to dendritic cell-derived immunoglobulin(Ig)-like receptor 1, DIgR1 - mouse |
chr10_-_70735742 | 0.01 |
ENSRNOT00000077035
|
Heatr9
|
HEAT repeat containing 9 |
chr13_+_49250301 | 0.01 |
ENSRNOT00000036110
|
Rbbp5
|
RB binding protein 5, histone lysine methyltransferase complex subunit |
chr4_+_162077188 | 0.01 |
ENSRNOT00000090431
|
LOC100910725
|
C-type lectin domain family 2 member D-related protein-like |
chr4_-_165541314 | 0.01 |
ENSRNOT00000013833
|
Styk1
|
serine/threonine/tyrosine kinase 1 |
chr5_-_162602339 | 0.01 |
ENSRNOT00000071779
|
RGD1563334
|
similar to novel protein similar to esterases |
chr10_-_87529599 | 0.01 |
ENSRNOT00000074099
|
Krtap2-1
|
keratin associated protein 2-1 |
chr1_+_213676954 | 0.01 |
ENSRNOT00000050551
|
Nlrp6
|
NLR family, pyrin domain containing 6 |
chr1_-_220491469 | 0.01 |
ENSRNOT00000042711
|
Rab1b
|
RAB1B, member RAS oncogene family |
chr15_+_32244416 | 0.01 |
ENSRNOT00000012019
ENSRNOT00000060254 |
AABR07017902.1
|
|
chr7_+_71023976 | 0.01 |
ENSRNOT00000005679
|
Tac3
|
tachykinin 3 |
chr1_-_224698514 | 0.01 |
ENSRNOT00000024234
|
Slc22a25
|
solute carrier family 22, member 25 |
chr12_+_47103314 | 0.01 |
ENSRNOT00000064910
|
Rnf10
|
ring finger protein 10 |
chr10_+_77762900 | 0.01 |
ENSRNOT00000003308
|
Mmd
|
monocyte to macrophage differentiation-associated |
chr4_-_150520774 | 0.01 |
ENSRNOT00000009095
|
Zfp9
|
zinc finger protein 9 |
chr7_+_66624512 | 0.00 |
ENSRNOT00000079410
|
Usp15
|
ubiquitin specific peptidase 15 |
chr2_+_188449718 | 0.00 |
ENSRNOT00000065791
|
Pklr
|
pyruvate kinase, liver and RBC |
chr1_+_88182585 | 0.00 |
ENSRNOT00000044145
|
Yif1b
|
Yip1 interacting factor homolog B, membrane trafficking protein |
chr7_-_97071968 | 0.00 |
ENSRNOT00000006596
|
Slc22a22
|
solute carrier family 22 (organic cation transporter), member 22 |
chr9_-_14654305 | 0.00 |
ENSRNOT00000065673
|
RGD1307182
|
similar to RIKEN cDNA B430306N03 gene |
chr16_-_26633796 | 0.00 |
ENSRNOT00000042181
|
Tmem192
|
transmembrane protein 192 |
chr1_-_99135977 | 0.00 |
ENSRNOT00000056515
|
Vom2r38
|
vomeronasal 2 receptor, 38 |
chr11_+_85508300 | 0.00 |
ENSRNOT00000038646
|
AABR07034730.3
|
|
chr3_-_6054483 | 0.00 |
ENSRNOT00000084491
|
Brd3
|
bromodomain containing 3 |
chr6_+_76745981 | 0.00 |
ENSRNOT00000076784
|
Brms1l
|
breast cancer metastasis-suppressor 1-like |
chrX_-_77559348 | 0.00 |
ENSRNOT00000047823
|
Fndc3c1
|
fibronectin type III domain containing 3C1 |
chr1_+_61095171 | 0.00 |
ENSRNOT00000042702
|
Vom1r19
|
vomeronasal 1 receptor 19 |
chr8_-_53758774 | 0.00 |
ENSRNOT00000068040
|
Ankk1
|
ankyrin repeat and kinase domain containing 1 |
chr6_-_139142218 | 0.00 |
ENSRNOT00000006975
|
Ighg
|
Immunoglobulin heavy chain (gamma polypeptide) |
chr10_+_65552897 | 0.00 |
ENSRNOT00000056217
|
Spag5
|
sperm associated antigen 5 |
chr5_-_77408323 | 0.00 |
ENSRNOT00000046857
ENSRNOT00000046760 |
LOC259245
Mup4
|
alpha-2u globulin PGCL5 major urinary protein 4 |
chr4_+_176565694 | 0.00 |
ENSRNOT00000016794
|
Pyroxd1
|
pyridine nucleotide-disulphide oxidoreductase domain 1 |
chr10_-_75171774 | 0.00 |
ENSRNOT00000011735
|
Epx
|
eosinophil peroxidase |
chr10_-_40381886 | 0.00 |
ENSRNOT00000050213
|
LOC100912427
|
nuclease-sensitive element-binding protein 1-like |
chr16_+_2379480 | 0.00 |
ENSRNOT00000079215
|
Dnah12
|
dynein, axonemal, heavy chain 12 |
chr4_+_31333970 | 0.00 |
ENSRNOT00000064866
|
LOC100911994
|
coiled-coil domain-containing protein 132-like |
chr4_+_162493908 | 0.00 |
ENSRNOT00000072064
|
Clec2d
|
C-type lectin domain family 2, member D |
chr20_+_44521279 | 0.00 |
ENSRNOT00000085987
|
Fyn
|
FYN proto-oncogene, Src family tyrosine kinase |
chr4_-_40385349 | 0.00 |
ENSRNOT00000039005
|
Gpr85
|
G protein-coupled receptor 85 |
chrX_+_110789269 | 0.00 |
ENSRNOT00000086014
|
Rnf128
|
ring finger protein 128, E3 ubiquitin protein ligase |
chr13_+_83721300 | 0.00 |
ENSRNOT00000082677
|
Adcy10
|
adenylate cyclase 10 (soluble) |
chr8_-_104335729 | 0.00 |
ENSRNOT00000015821
|
Rnf7
|
ring finger protein 7 |
chr11_+_88095170 | 0.00 |
ENSRNOT00000041557
|
Ccdc116
|
coiled-coil domain containing 116 |
chr9_-_81880105 | 0.00 |
ENSRNOT00000022677
|
Rnf25
|
ring finger protein 25 |
chr20_+_18833481 | 0.00 |
ENSRNOT00000080846
|
Bicc1
|
BicC family RNA binding protein 1 |
chr1_+_185673177 | 0.00 |
ENSRNOT00000048020
|
Sox6
|
SRY box 6 |
chr4_-_161907767 | 0.00 |
ENSRNOT00000009557
|
A2ml1
|
alpha-2-macroglobulin-like 1 |
chr10_-_82374171 | 0.00 |
ENSRNOT00000032693
|
Eme1
|
essential meiotic structure-specific endonuclease 1 |
chr15_-_29623597 | 0.00 |
ENSRNOT00000074483
|
AABR07017647.1
|
|
chr9_+_84569597 | 0.00 |
ENSRNOT00000020161
|
Acsl3
|
acyl-CoA synthetase long-chain family member 3 |
chr20_+_28815039 | 0.00 |
ENSRNOT00000075800
|
Sowahc
|
sosondowah ankyrin repeat domain family member C |
chr10_+_34578356 | 0.00 |
ENSRNOT00000047454
|
Olr1389
|
olfactory receptor 1389 |
chr13_-_91981432 | 0.00 |
ENSRNOT00000004637
|
AABR07021804.1
|
|
chr1_+_199352344 | 0.00 |
ENSRNOT00000026466
|
Bckdk
|
branched chain ketoacid dehydrogenase kinase |
chr9_+_88494676 | 0.00 |
ENSRNOT00000089451
|
LOC102556337
|
mitochondrial fission factor-like |
chr15_-_60743064 | 0.00 |
ENSRNOT00000013333
|
Akap11
|
A-kinase anchoring protein 11 |
chr1_+_93242050 | 0.00 |
ENSRNOT00000013741
|
RGD1562402
|
similar to 60S ribosomal protein L27a |
chr17_-_66288202 | 0.00 |
ENSRNOT00000083172
|
Mtr
|
5-methyltetrahydrofolate-homocysteine methyltransferase |
chrX_+_99852198 | 0.00 |
ENSRNOT00000082451
|
AABR07040412.1
|
|