GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Sox30 Links NCBI RGD Ensembl	ENSRNOG00000006098	SRY box 30

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_+_155160481 Show fit	0.11	ENSRNOT00000021133	Ppp1r16b Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 16B
chr5_-_133959447 Show fit	0.09	ENSRNOT00000011985	Cyp4x1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 4, subfamily x, polypeptide 1
chr18_+_30890869 Show fit	0.08	ENSRNOT00000060466	Pcdhgb6 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 6
chr10_+_36715565 Show fit	0.07	ENSRNOT00000005048	Clk4 Links NCBI RGD Ensembl Show fit	CDC-like kinase 4
chr17_-_57394985 Show fit	0.06	ENSRNOT00000019968	Epc1 Links NCBI RGD Ensembl Show fit	enhancer of polycomb homolog 1
chr18_+_30875011 Show fit	0.06	ENSRNOT00000027009	Pcdhga8 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily A, 8
chr5_+_152606847 Show fit	0.06	ENSRNOT00000089070	Pafah2 Links NCBI RGD Ensembl Show fit	platelet-activating factor acetylhydrolase 2
chr16_+_74237001 Show fit	0.05	ENSRNOT00000026039	Polb Links NCBI RGD Ensembl Show fit	DNA polymerase beta
chr2_-_117454769 Show fit	0.04	ENSRNOT00000068381	Mecom Links NCBI RGD Ensembl Show fit	MDS1 and EVI1 complex locus
chr14_-_81399353 Show fit	0.04	ENSRNOT00000018340	Add1 Links NCBI RGD Ensembl Show fit	adducin 1
chr1_+_13595295 Show fit	0.04	ENSRNOT00000079250	Nhsl1 Links NCBI RGD Ensembl Show fit	NHS-like 1
chr8_+_76400341 Show fit	0.03	ENSRNOT00000087382 ENSRNOT00000081072	Bnip2 Links NCBI RGD Ensembl Show fit	BCL2/adenovirus E1B interacting protein 2
chr3_-_48372583 Show fit	0.03	ENSRNOT00000040482 ENSRNOT00000077788 ENSRNOT00000085426	Dpp4 Links NCBI RGD Ensembl Show fit	dipeptidylpeptidase 4
chr14_-_104960141 Show fit	0.03	ENSRNOT00000056944	Aftph Links NCBI RGD Ensembl Show fit	aftiphilin
chr4_-_11610518 Show fit	0.03	ENSRNOT00000066643	Magi2 Links NCBI RGD Ensembl Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr6_-_51019407 Show fit	0.03	ENSRNOT00000011659	Gpr22 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 22
chr16_+_50152008 Show fit	0.03	ENSRNOT00000019237	Klkb1 Links NCBI RGD Ensembl Show fit	kallikrein B1
chr8_-_62987182 Show fit	0.03	ENSRNOT00000070885	Islr2 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily containing leucine-rich repeat 2
chr9_+_73418607 Show fit	0.02	ENSRNOT00000092547	Map2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 2
chr10_+_82775691 Show fit	0.02	ENSRNOT00000030737	Hils1 Links NCBI RGD Ensembl Show fit	histone linker H1 domain, spermatid-specific 1
chr13_+_87986240 Show fit	0.02	ENSRNOT00000003705	Rgs5 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 5
chr15_-_37056892 Show fit	0.02	ENSRNOT00000047731	Zmym5 Links NCBI RGD Ensembl Show fit	zinc finger MYM-type containing 5
chr7_+_130042947 Show fit	0.02	ENSRNOT00000089707	Panx2 Links NCBI RGD Ensembl Show fit	pannexin 2
chr10_-_84920886 Show fit	0.02	ENSRNOT00000068083	Sp2 Links NCBI RGD Ensembl Show fit	Sp2 transcription factor
chrX_+_62727755 Show fit	0.02	ENSRNOT00000077055	Pcyt1b Links NCBI RGD Ensembl Show fit	phosphate cytidylyltransferase 1, choline, beta
chr2_+_93520734 Show fit	0.02	ENSRNOT00000083909	Snx16 Links NCBI RGD Ensembl Show fit	sorting nexin 16
chr14_+_48726045 Show fit	0.02	ENSRNOT00000086646	Arap2 Links NCBI RGD Ensembl Show fit	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr2_+_231884337 Show fit	0.02	ENSRNOT00000014695	Zgrf1 Links NCBI RGD Ensembl Show fit	zinc finger, GRF-type containing 1
chr13_+_57243877 Show fit	0.01	ENSRNOT00000083693	Kcnt2 Links NCBI RGD Ensembl Show fit	potassium sodium-activated channel subfamily T member 2
chr11_-_70585053 Show fit	0.01	ENSRNOT00000086955	Zfp148 Links NCBI RGD Ensembl Show fit	zinc finger protein 148
chr9_+_111233147 Show fit	0.01	ENSRNOT00000056439	Ppip5k2 Links NCBI RGD Ensembl Show fit	diphosphoinositol pentakisphosphate kinase 2
chr5_+_105230580 Show fit	0.01	ENSRNOT00000010056	Acer2 Links NCBI RGD Ensembl Show fit	alkaline ceramidase 2
chr18_+_30826260 Show fit	0.01	ENSRNOT00000065235	Pcdhgb1 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 1
chr4_-_39102807 Show fit	0.01	ENSRNOT00000052063	Thsd7a Links NCBI RGD Ensembl Show fit	thrombospondin type 1 domain containing 7A
chr14_-_84106997 Show fit	0.01	ENSRNOT00000065501	Osbp2 Links NCBI RGD Ensembl Show fit	oxysterol binding protein 2
chr2_+_188087486 Show fit	0.01	ENSRNOT00000027455	Rit1 Links NCBI RGD Ensembl Show fit	Ras-like without CAAX 1
chrX_+_70596576 Show fit	0.00	ENSRNOT00000045082 ENSRNOT00000003741 ENSRNOT00000076079	Dlg3 Links NCBI RGD Ensembl Show fit	discs large MAGUK scaffold protein 3
chr5_-_157059508 Show fit	0.00	ENSRNOT00000022282	Vwa5b1 Links NCBI RGD Ensembl Show fit	von Willebrand factor A domain containing 5B1
chr2_+_95008477 Show fit	0.00	ENSRNOT00000015327	Tpd52 Links NCBI RGD Ensembl Show fit	tumor protein D52
chr6_-_41039437 Show fit	0.00	ENSRNOT00000005774	Trib2 Links NCBI RGD Ensembl Show fit	tribbles pseudokinase 2
chr18_+_28781349 Show fit	0.00	ENSRNOT00000026112	Psd2 Links NCBI RGD Ensembl Show fit	pleckstrin and Sec7 domain containing 2

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:1902309	negative regulation of peptidyl-serine dephosphorylation(GO:1902309)
0.0	0.0	GO:0061744	motor behavior(GO:0061744)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0032777	Piccolo NuA4 histone acetyltransferase complex(GO:0032777)