GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr7_-_123445613 Show fit	0.07	ENSRNOT00000070937	Shisa8 Links NCBI RGD Ensembl Show fit	shisa family member 8
chr8_-_68966108 Show fit	0.03	ENSRNOT00000012155	Smad6 Links NCBI RGD Ensembl Show fit	SMAD family member 6
chr3_+_162357356 Show fit	0.03	ENSRNOT00000030119	Eya2 Links NCBI RGD Ensembl Show fit	EYA transcriptional coactivator and phosphatase 2
chr4_-_77489535 Show fit	0.01	ENSRNOT00000008728	Pdia4 Links NCBI RGD Ensembl Show fit	protein disulfide isomerase family A, member 4
chr3_+_95715193 Show fit	0.01	ENSRNOT00000089525	Pax6 Links NCBI RGD Ensembl Show fit	paired box 6
chr3_-_3541947 Show fit	0.01	ENSRNOT00000024786	Nacc2 Links NCBI RGD Ensembl Show fit	NACC family member 2
chr20_+_13670066 Show fit	0.01	ENSRNOT00000031400	LOC103694874 Links NCBI RGD Ensembl Show fit	stromelysin-3
chr10_+_56453877 Show fit	0.01	ENSRNOT00000031640	Plscr3 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 3
chr10_-_83655182 Show fit	0.01	ENSRNOT00000007897	Abi3 Links NCBI RGD Ensembl Show fit	ABI family, member 3
chr11_-_30428073 Show fit	0.01	ENSRNOT00000047741	Scaf4 Links NCBI RGD Ensembl Show fit	SR-related CTD-associated factor 4
chr6_+_106052212 Show fit	0.01	ENSRNOT00000010626	Sipa1l1 Links NCBI RGD Ensembl Show fit	signal-induced proliferation-associated 1 like 1
chr15_+_33600337 Show fit	0.01	ENSRNOT00000075965	Cmtm5 Links NCBI RGD Ensembl Show fit	CKLF-like MARVEL transmembrane domain containing 5
chr6_-_21600451 Show fit	0.01	ENSRNOT00000047674	Ltbp1 Links NCBI RGD Ensembl Show fit	latent transforming growth factor beta binding protein 1
chr16_+_10727571 Show fit	0.01	ENSRNOT00000084422	Mmrn2 Links NCBI RGD Ensembl Show fit	multimerin 2
chr8_+_128824508 Show fit	0.01	ENSRNOT00000025343	Mobp Links NCBI RGD Ensembl Show fit	myelin-associated oligodendrocyte basic protein
chr1_-_48825364 Show fit	0.01	ENSRNOT00000024213	Agpat4 Links NCBI RGD Ensembl Show fit	1-acylglycerol-3-phosphate O-acyltransferase 4
chr15_+_33600102 Show fit	0.01	ENSRNOT00000022664	Cmtm5 Links NCBI RGD Ensembl Show fit	CKLF-like MARVEL transmembrane domain containing 5
chr8_+_69971778 Show fit	0.01	ENSRNOT00000058007 ENSRNOT00000037941 ENSRNOT00000050649	Megf11 Links NCBI RGD Ensembl Show fit	multiple EGF-like-domains 11
chr18_+_60392376 Show fit	0.01	ENSRNOT00000023890	Nedd4l Links NCBI RGD Ensembl Show fit	neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
chr11_-_88092756 Show fit	0.01	ENSRNOT00000002542	Ydjc Links NCBI RGD Ensembl Show fit	YdjC homolog (bacterial)
chr1_+_101214593 Show fit	0.01	ENSRNOT00000028086	Tead2 Links NCBI RGD Ensembl Show fit	TEA domain transcription factor 2
chr4_+_13405136 Show fit	0.01	ENSRNOT00000091004	Gnai1 Links NCBI RGD Ensembl Show fit	G protein subunit alpha i1
chr5_-_147953093 Show fit	0.00	ENSRNOT00000075270	Khdrbs1 Links NCBI RGD Ensembl Show fit	KH RNA binding domain containing, signal transduction associated 1
chr12_+_47992091 Show fit	0.00	ENSRNOT00000073019	Kctd10 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 10
chr10_-_104358253 Show fit	0.00	ENSRNOT00000005942	Caskin2 Links NCBI RGD Ensembl Show fit	cask-interacting protein 2
chr5_+_147714163 Show fit	0.00	ENSRNOT00000012663	Marcksl1 Links NCBI RGD Ensembl Show fit	MARCKS-like 1
chr3_+_149144795 Show fit	0.00	ENSRNOT00000015482	Dnmt3b Links NCBI RGD Ensembl Show fit	DNA methyltransferase 3 beta
chr2_-_139528162 Show fit	0.00	ENSRNOT00000014317	Slc7a11 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 11
chr1_-_170628915 Show fit	0.00	ENSRNOT00000042865	Dchs1 Links NCBI RGD Ensembl Show fit	dachsous cadherin-related 1
chr1_-_170594168 Show fit	0.00	ENSRNOT00000026280	Tpp1 Links NCBI RGD Ensembl Show fit	tripeptidyl peptidase 1
chr1_+_264741911 Show fit	0.00	ENSRNOT00000019956	Sema4g Links NCBI RGD Ensembl Show fit	semaphorin 4G
chr10_+_75365822 Show fit	0.00	ENSRNOT00000055705	Vezf1 Links NCBI RGD Ensembl Show fit	vascular endothelial zinc finger 1
chrX_-_118513061 Show fit	0.00	ENSRNOT00000043338	Il13ra2 Links NCBI RGD Ensembl Show fit	interleukin 13 receptor subunit alpha 2
chr2_+_104744461 Show fit	0.00	ENSRNOT00000016083 ENSRNOT00000082627	Cp Links NCBI RGD Ensembl Show fit	ceruloplasmin
chr6_-_94980004 Show fit	0.00	ENSRNOT00000006373	Rtn1 Links NCBI RGD Ensembl Show fit	reticulon 1
chr10_+_57040267 Show fit	0.00	ENSRNOT00000026207	Arrb2 Links NCBI RGD Ensembl Show fit	arrestin, beta 2
chr3_-_5976244 Show fit	0.00	ENSRNOT00000009893	Vav2 Links NCBI RGD Ensembl Show fit	vav guanine nucleotide exchange factor 2
chr9_+_46657575 Show fit	0.00	ENSRNOT00000083322	Map4k4 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 4
chr5_+_160095427 Show fit	0.00	ENSRNOT00000077609	AABR07050298.1 Links NCBI RGD Ensembl Show fit
chr19_+_755460 Show fit	0.00	ENSRNOT00000076560	Dync1li2 Links NCBI RGD Ensembl Show fit	dynein, cytoplasmic 1 light intermediate chain 2
chr18_+_30909490 Show fit	0.00	ENSRNOT00000026967	Pcdhgb8 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 8
chr16_-_69961162 Show fit	0.00	ENSRNOT00000074955	Prrg3 Links NCBI RGD Ensembl Show fit	proline rich and Gla domain 3
chr9_+_117044533 Show fit	0.00	ENSRNOT00000072916	Tmem200c Links NCBI RGD Ensembl Show fit	transmembrane protein 200C
chrX_+_65566047 Show fit	0.00	ENSRNOT00000092103	Heph Links NCBI RGD Ensembl Show fit	hephaestin
chr1_-_78521999 Show fit	0.00	ENSRNOT00000021223	Arhgap35 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 35
chr14_-_44845218 Show fit	0.00	ENSRNOT00000004003	Klhl5 Links NCBI RGD Ensembl Show fit	kelch-like family member 5
chr9_-_116222374 Show fit	0.00	ENSRNOT00000090111 ENSRNOT00000067900	Arhgap28 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 28
chr6_+_108820774 Show fit	0.00	ENSRNOT00000089683 ENSRNOT00000080038 ENSRNOT00000006492	Ylpm1 Links NCBI RGD Ensembl Show fit	YLP motif containing 1
chr18_+_79406381 Show fit	0.00	ENSRNOT00000022303 ENSRNOT00000058295 ENSRNOT00000058296 ENSRNOT00000022280	Mbp Links NCBI RGD Ensembl Show fit	myelin basic protein
chrX_-_159891326 Show fit	0.00	ENSRNOT00000001154	Rbmx Links NCBI RGD Ensembl Show fit	RNA binding motif protein, X-linked
chr1_+_234363994 Show fit	0.00	ENSRNOT00000018137	Rorb Links NCBI RGD Ensembl Show fit	RAR-related orphan receptor B
chr9_-_100253609 Show fit	0.00	ENSRNOT00000036061	Kif1a Links NCBI RGD Ensembl Show fit	kinesin family member 1A

View svg image
View png image