GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Sox7 Links NCBI RGD Ensembl	ENSRNOG00000012049	SRY box 7

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Sox7	rn6_v1_chr15_+_47293699_47293699	-0.56	3.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr16_-_75340360 Show fit	0.05	ENSRNOT00000018501	Defa5 Links NCBI RGD Ensembl Show fit	defensin alpha 5
chr9_+_27343853 Show fit	0.03	ENSRNOT00000072794	Tmem14a Links NCBI RGD Ensembl Show fit	transmembrane protein 14A
chr9_-_27452902 Show fit	0.02	ENSRNOT00000018325	Gsta1 Links NCBI RGD Ensembl Show fit	glutathione S-transferase alpha 1
chr16_-_75481115 Show fit	0.02	ENSRNOT00000035128	Defa7 Links NCBI RGD Ensembl Show fit	defensin alpha 7
chrX_+_114930457 Show fit	0.02	ENSRNOT00000089141	Pak3 Links NCBI RGD Ensembl Show fit	p21 (RAC1) activated kinase 3
chr20_-_32139789 Show fit	0.02	ENSRNOT00000078140	Srgn Links NCBI RGD Ensembl Show fit	serglycin
chr6_-_114476723 Show fit	0.02	ENSRNOT00000005162	Dio2 Links NCBI RGD Ensembl Show fit	deiodinase, iodothyronine, type II
chr3_+_138398011 Show fit	0.02	ENSRNOT00000038865	Mgme1 Links NCBI RGD Ensembl Show fit	mitochondrial genome maintenance exonuclease 1
chr2_+_252452269 Show fit	0.01	ENSRNOT00000021970	Uox Links NCBI RGD Ensembl Show fit	urate oxidase
chr10_-_49192693 Show fit	0.01	ENSRNOT00000004294	Zfp286a Links NCBI RGD Ensembl Show fit	zinc finger protein 286A
chr20_+_13498926 Show fit	0.01	ENSRNOT00000070992 ENSRNOT00000045375	Slc5a4b Links NCBI RGD Ensembl Show fit	solute carrier family 5 (neutral amino acid transporters, system A), member 4b
chr6_-_135251073 Show fit	0.01	ENSRNOT00000088986	Mok Links NCBI RGD Ensembl Show fit	MOK protein kinase
chr18_-_81499051 Show fit	0.01	ENSRNOT00000034970	Cndp1 Links NCBI RGD Ensembl Show fit	carnosine dipeptidase 1
chrX_-_107442878 Show fit	0.01	ENSRNOT00000052302	Glra4 Links NCBI RGD Ensembl Show fit	glycine receptor, alpha 4
chr18_+_57727187 Show fit	0.01	ENSRNOT00000065483 ENSRNOT00000025871	Htr4 Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 4
chr8_+_64531594 Show fit	0.01	ENSRNOT00000036798	Gramd2 Links NCBI RGD Ensembl Show fit	GRAM domain containing 2
chr19_+_22569999 Show fit	0.01	ENSRNOT00000022573	Dnaja2 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member A2
chr7_-_69104950 Show fit	0.01	ENSRNOT00000049063	LOC500846 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC500846
chr3_+_2504694 Show fit	0.01	ENSRNOT00000061987	Tmem210 Links NCBI RGD Ensembl Show fit	transmembrane protein 210
chr1_+_229066045 Show fit	0.01	ENSRNOT00000016454	Glyat Links NCBI RGD Ensembl Show fit	glycine-N-acyltransferase
chr4_+_155531906 Show fit	0.01	ENSRNOT00000060937	Nanog Links NCBI RGD Ensembl Show fit	Nanog homeobox
chr9_-_44483655 Show fit	0.01	ENSRNOT00000024959	Mitd1 Links NCBI RGD Ensembl Show fit	microtubule interacting and trafficking domain containing 1
chr1_+_97777685 Show fit	0.01	ENSRNOT00000030895	LOC690284 Links NCBI RGD Ensembl Show fit	similar to F49E2.5d
chrX_+_136460215 Show fit	0.01	ENSRNOT00000093538	Arhgap36 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 36
chr1_+_199596024 Show fit	0.01	ENSRNOT00000085336	Itgad Links NCBI RGD Ensembl Show fit	integrin subunit alpha D
chr14_+_91557601 Show fit	0.01	ENSRNOT00000038733	RGD1309870 Links NCBI RGD Ensembl Show fit	hypothetical LOC289778
chr10_+_17261541 Show fit	0.01	ENSRNOT00000005478	Sh3pxd2b Links NCBI RGD Ensembl Show fit	SH3 and PX domains 2B
chr9_-_84894599 Show fit	0.01	ENSRNOT00000018423	Hdac1l Links NCBI RGD Ensembl Show fit	histone deacetylase 1-like
chr15_+_31948035 Show fit	0.01	ENSRNOT00000071627	AABR07017868.1 Links NCBI RGD Ensembl Show fit
chr17_-_69460321 Show fit	0.01	ENSRNOT00000058367	Akr1c1 Links NCBI RGD Ensembl Show fit	aldo-keto reductase family 1, member C1
chr1_+_101412736 Show fit	0.01	ENSRNOT00000067468	Lhb Links NCBI RGD Ensembl Show fit	luteinizing hormone beta polypeptide
chrX_+_1275612 Show fit	0.00	ENSRNOT00000013476	Uxt Links NCBI RGD Ensembl Show fit	ubiquitously-expressed, prefoldin-like chaperone
chr2_-_252451999 Show fit	0.00	ENSRNOT00000021861	Dnase2b Links NCBI RGD Ensembl Show fit	deoxyribonuclease 2 beta
chr17_-_14373983 Show fit	0.00	ENSRNOT00000071112	AABR07027098.1 Links NCBI RGD Ensembl Show fit
chr16_+_52024690 Show fit	0.00	ENSRNOT00000048104	AABR07025825.1 Links NCBI RGD Ensembl Show fit
chrX_-_82418425 Show fit	0.00	ENSRNOT00000022525	Ankra2 Links NCBI RGD Ensembl Show fit	ankyrin repeat family A member 2
chr7_-_104486710 Show fit	0.00	ENSRNOT00000084764	Gsdmc Links NCBI RGD Ensembl Show fit	gasdermin C
chr8_+_113939886 Show fit	0.00	ENSRNOT00000079562	Aste1 Links NCBI RGD Ensembl Show fit	asteroid homolog 1 (Drosophila)
chr7_+_35472102 Show fit	0.00	ENSRNOT00000010316	Tmcc3 Links NCBI RGD Ensembl Show fit	transmembrane and coiled-coil domain family 3
chr1_+_101055622 Show fit	0.00	ENSRNOT00000079189	Nosip Links NCBI RGD Ensembl Show fit	nitric oxide synthase interacting protein
chrX_-_106066227 Show fit	0.00	ENSRNOT00000033752	Nxf7 Links NCBI RGD Ensembl Show fit	nuclear RNA export factor 7
chr10_-_45798715 Show fit	0.00	ENSRNOT00000028948	Snap47 Links NCBI RGD Ensembl Show fit	synaptosomal-associated protein, 47
chr10_-_34333305 Show fit	0.00	ENSRNOT00000071365	Olr1384 Links NCBI RGD Ensembl Show fit	olfactory receptor gene Olr1384
chrX_-_153878806 Show fit	0.00	ENSRNOT00000087990	Aff2 Links NCBI RGD Ensembl Show fit	AF4/FMR2 family, member 2
chr3_-_6054483 Show fit	0.00	ENSRNOT00000084491	Brd3 Links NCBI RGD Ensembl Show fit	bromodomain containing 3
chr16_+_55152748 Show fit	0.00	ENSRNOT00000000121	Fgf20 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 20
chr7_+_40316639 Show fit	0.00	ENSRNOT00000080150	LOC500827 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ35821
chrX_+_144994139 Show fit	0.00	ENSRNOT00000071783	LOC102546596 Links NCBI RGD Ensembl Show fit	pre-mRNA-splicing factor CWC22 homolog
chr4_+_31333970 Show fit	0.00	ENSRNOT00000064866	LOC100911994 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 132-like
chr9_-_44560837 Show fit	0.00	ENSRNOT00000090870	Mitd1 Links NCBI RGD Ensembl Show fit	microtubule interacting and trafficking domain containing 1
chr6_+_18880737 Show fit	0.00	ENSRNOT00000003432	Alkbh8 Links NCBI RGD Ensembl Show fit	alkB homolog 8, tRNA methyltransferase
chr5_+_2654065 Show fit	0.00	ENSRNOT00000074957	LOC100912291 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100912291

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