GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Stat2 Links NCBI RGD Ensembl	ENSRNOG00000031081	signal transducer and activator of transcription 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Stat2	rn6_v1_chr7_+_2694440_2694440	-0.64	2.5e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr12_-_47482961 Show fit	0.57	ENSRNOT00000001600	Oasl2 Links NCBI RGD Ensembl Show fit	2'-5' oligoadenylate synthetase-like 2
chr1_-_214252456 Show fit	0.51	ENSRNOT00000023504	Irf7 Links NCBI RGD Ensembl Show fit	interferon regulatory factor 7
chr17_+_9236249 Show fit	0.47	ENSRNOT00000015878	Tifab Links NCBI RGD Ensembl Show fit	TIFA inhibitor
chr1_+_53220397 Show fit	0.44	ENSRNOT00000089989	AABR07001573.1 Links NCBI RGD Ensembl Show fit
chr2_+_248178389 Show fit	0.39	ENSRNOT00000037339	Gbp5 Links NCBI RGD Ensembl Show fit	guanylate binding protein 5
chr10_+_64737022 Show fit	0.39	ENSRNOT00000017071 ENSRNOT00000093232 ENSRNOT00000017042 ENSRNOT00000093244	Lgals9 Links NCBI RGD Ensembl Show fit	galectin 9
chr20_+_3979035 Show fit	0.35	ENSRNOT00000000529	Tap1 Links NCBI RGD Ensembl Show fit	transporter 1, ATP binding cassette subfamily B member
chr15_+_60084918 Show fit	0.32	ENSRNOT00000012632	Epsti1 Links NCBI RGD Ensembl Show fit	epithelial stromal interaction 1
chr2_-_256915563 Show fit	0.32	ENSRNOT00000084873 ENSRNOT00000029990	Ifi44 Links NCBI RGD Ensembl Show fit	interferon-induced protein 44
chr9_-_44483655 Show fit	0.31	ENSRNOT00000024959	Mitd1 Links NCBI RGD Ensembl Show fit	microtubule interacting and trafficking domain containing 1
chr10_-_70744315 Show fit	0.30	ENSRNOT00000014865	Ccl5 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 5
chr2_+_166475070 Show fit	0.29	ENSRNOT00000071111	AABR07011700.1 Links NCBI RGD Ensembl Show fit
chr5_-_126096068 Show fit	0.28	ENSRNOT00000036793	AABR07073134.1 Links NCBI RGD Ensembl Show fit
chr4_+_153805993 Show fit	0.26	ENSRNOT00000056174	Usp18 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 18
chr12_+_41200718 Show fit	0.24	ENSRNOT00000038426 ENSRNOT00000048450 ENSRNOT00000067176	Oas1a Links NCBI RGD Ensembl Show fit	2'-5' oligoadenylate synthetase 1A
chr11_+_38035450 Show fit	0.23	ENSRNOT00000083067	Mx2 Links NCBI RGD Ensembl Show fit	MX dynamin like GTPase 2
chr1_-_198008893 Show fit	0.23	ENSRNOT00000025950	Il27 Links NCBI RGD Ensembl Show fit	interleukin 27
chr1_+_142679345 Show fit	0.23	ENSRNOT00000034267	Zscan2 Links NCBI RGD Ensembl Show fit	zinc finger and SCAN domain containing 2
chr1_+_101517714 Show fit	0.22	ENSRNOT00000028423	Plekha4 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A4
chr9_-_44560837 Show fit	0.22	ENSRNOT00000090870	Mitd1 Links NCBI RGD Ensembl Show fit	microtubule interacting and trafficking domain containing 1
chr1_+_1545134 Show fit	0.22	ENSRNOT00000044523	AABR07000156.1 Links NCBI RGD Ensembl Show fit
chr2_-_98610368 Show fit	0.22	ENSRNOT00000011641	Zfhx4 Links NCBI RGD Ensembl Show fit	zinc finger homeobox 4
chr3_-_37445907 Show fit	0.21	ENSRNOT00000006172	Rbm43 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 43
chr11_+_68105369 Show fit	0.21	ENSRNOT00000046888	Parp14 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 14
chrX_-_105390580 Show fit	0.21	ENSRNOT00000077547	Btk Links NCBI RGD Ensembl Show fit	Bruton tyrosine kinase
chr10_+_58860940 Show fit	0.20	ENSRNOT00000056551 ENSRNOT00000074523	XAF1 Links NCBI RGD Ensembl Show fit	XIAP associated factor-1
chr9_-_92616165 Show fit	0.20	ENSRNOT00000056995	Sp110 Links NCBI RGD Ensembl Show fit	SP110 nuclear body protein
chr15_-_61772516 Show fit	0.19	ENSRNOT00000015605 ENSRNOT00000093399	Wbp4 Links NCBI RGD Ensembl Show fit	WW domain binding protein 4
chr4_-_66899914 Show fit	0.19	ENSRNOT00000011481	Parp12 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 12
chr5_-_173626248 Show fit	0.19	ENSRNOT00000039263	Isg15 Links NCBI RGD Ensembl Show fit	ISG15 ubiquitin-like modifier
chr2_+_248276709 Show fit	0.19	ENSRNOT00000068683	Gbp2 Links NCBI RGD Ensembl Show fit	guanylate binding protein 2
chr10_-_38969501 Show fit	0.19	ENSRNOT00000090691 ENSRNOT00000081309 ENSRNOT00000010029	Il4 Links NCBI RGD Ensembl Show fit	interleukin 4
chr14_+_17210733 Show fit	0.19	ENSRNOT00000003075	Cxcl10 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 10
chr13_+_44475970 Show fit	0.18	ENSRNOT00000024602 ENSRNOT00000091645	Ccnt2 Links NCBI RGD Ensembl Show fit	cyclin T2
chr20_-_4542073 Show fit	0.18	ENSRNOT00000000477	Cfb Links NCBI RGD Ensembl Show fit	complement factor B
chr10_-_34221928 Show fit	0.18	ENSRNOT00000045545	Irgm Links NCBI RGD Ensembl Show fit	immunity-related GTPase M
chr7_-_36000906 Show fit	0.18	ENSRNOT00000011178	Plxnc1 Links NCBI RGD Ensembl Show fit	plexin C1
chr2_+_216863428 Show fit	0.17	ENSRNOT00000068413	Col11a1 Links NCBI RGD Ensembl Show fit	collagen type XI alpha 1 chain
chr5_+_159734838 Show fit	0.17	ENSRNOT00000079905	Rsg1 Links NCBI RGD Ensembl Show fit	REM2 and RAB-like small GTPase 1
chr4_+_179398621 Show fit	0.16	ENSRNOT00000049474 ENSRNOT00000067506	Lrmp Links NCBI RGD Ensembl Show fit	lymphoid-restricted membrane protein
chr10_-_88163712 Show fit	0.16	ENSRNOT00000005382 ENSRNOT00000084493	Krt17 Links NCBI RGD Ensembl Show fit	keratin 17
chr16_-_19942343 Show fit	0.16	ENSRNOT00000087162 ENSRNOT00000091906	Bst2 Links NCBI RGD Ensembl Show fit	bone marrow stromal cell antigen 2
chr15_+_34282936 Show fit	0.16	ENSRNOT00000026364	Irf9 Links NCBI RGD Ensembl Show fit	interferon regulatory factor 9
chr17_-_32661865 Show fit	0.15	ENSRNOT00000022194	Serpinb9 Links NCBI RGD Ensembl Show fit	serpin family B member 9
chr17_-_84247038 Show fit	0.15	ENSRNOT00000068553	Nebl Links NCBI RGD Ensembl Show fit	nebulette
chr13_+_48790767 Show fit	0.15	ENSRNOT00000087504	Elk4 Links NCBI RGD Ensembl Show fit	ELK4, ETS transcription factor
chr20_-_3166569 Show fit	0.14	ENSRNOT00000091390	AABR07044362.1 Links NCBI RGD Ensembl Show fit
chr2_-_243224883 Show fit	0.14	ENSRNOT00000014139	Dapp1 Links NCBI RGD Ensembl Show fit	dual adaptor of phosphotyrosine and 3-phosphoinositides 1
chr20_-_3978845 Show fit	0.13	ENSRNOT00000000532	Psmb9 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 9
chr11_+_38035611 Show fit	0.13	ENSRNOT00000087603 ENSRNOT00000002695	Mx2 Links NCBI RGD Ensembl Show fit	MX dynamin like GTPase 2
chr17_-_47653989 Show fit	0.13	ENSRNOT00000072833	LOC498759 Links NCBI RGD Ensembl Show fit	LRRGT00094
chr18_+_55685613 Show fit	0.13	ENSRNOT00000040116	MGC105567 Links NCBI RGD Ensembl Show fit	similar to cDNA sequence BC023105
chr11_+_67757928 Show fit	0.13	ENSRNOT00000039215	Dtx3l Links NCBI RGD Ensembl Show fit	deltex E3 ubiquitin ligase 3L
chr2_+_52358097 Show fit	0.13	ENSRNOT00000037659	Tmem267 Links NCBI RGD Ensembl Show fit	transmembrane protein 267
chr8_-_63034226 Show fit	0.12	ENSRNOT00000043434	Pml Links NCBI RGD Ensembl Show fit	promyelocytic leukemia
chr5_+_159735008 Show fit	0.12	ENSRNOT00000064310	Rsg1 Links NCBI RGD Ensembl Show fit	REM2 and RAB-like small GTPase 1
chr1_+_252894663 Show fit	0.12	ENSRNOT00000054757	Ifit2 Links NCBI RGD Ensembl Show fit	interferon-induced protein with tetratricopeptide repeats 2
chr4_-_120408232 Show fit	0.12	ENSRNOT00000073269	LOC100911337 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S25-like
chr1_+_30681681 Show fit	0.12	ENSRNOT00000015395	Rspo3 Links NCBI RGD Ensembl Show fit	R-spondin 3
chr13_+_48790951 Show fit	0.12	ENSRNOT00000090233	Elk4 Links NCBI RGD Ensembl Show fit	ELK4, ETS transcription factor
chr8_+_21663325 Show fit	0.11	ENSRNOT00000027749	Ubl5 Links NCBI RGD Ensembl Show fit	ubiquitin-like 5
chr3_-_171286413 Show fit	0.11	ENSRNOT00000008365 ENSRNOT00000081036	Zbp1 Links NCBI RGD Ensembl Show fit	Z-DNA binding protein 1
chr1_+_84009268 Show fit	0.11	ENSRNOT00000057230 ENSRNOT00000081121	RGD1560854 Links NCBI RGD Ensembl Show fit	similar to FLJ41131 protein
chr16_+_50111306 Show fit	0.11	ENSRNOT00000019302	Cyp4v3 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 4, subfamily v, polypeptide 3
chr1_+_64046377 Show fit	0.11	ENSRNOT00000085010	Tmc4 Links NCBI RGD Ensembl Show fit	transmembrane channel-like 4
chr5_-_58198782 Show fit	0.11	ENSRNOT00000023951	Ccl21 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 21
chr4_+_102351036 Show fit	0.11	ENSRNOT00000079277	AABR07060994.1 Links NCBI RGD Ensembl Show fit
chr5_-_135472116 Show fit	0.11	ENSRNOT00000022170	Nasp Links NCBI RGD Ensembl Show fit	nuclear autoantigenic sperm protein
chr4_-_88649216 Show fit	0.11	ENSRNOT00000058626	Herc6 Links NCBI RGD Ensembl Show fit	HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
chr15_-_93748742 Show fit	0.11	ENSRNOT00000093370	Mycbp2 Links NCBI RGD Ensembl Show fit	MYC binding protein 2, E3 ubiquitin protein ligase
chr13_-_52514875 Show fit	0.10	ENSRNOT00000064758	Nav1 Links NCBI RGD Ensembl Show fit	neuron navigator 1
chr1_-_53520788 Show fit	0.10	ENSRNOT00000060121	Gpr31 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 31
chr3_+_72460889 Show fit	0.10	ENSRNOT00000012209	Tnks1bp1 Links NCBI RGD Ensembl Show fit	tankyrase 1 binding protein 1
chr1_-_197886759 Show fit	0.10	ENSRNOT00000074274	Sh2b1 Links NCBI RGD Ensembl Show fit	SH2B adaptor protein 1
chr10_-_36322356 Show fit	0.10	ENSRNOT00000000248	Zfp354c Links NCBI RGD Ensembl Show fit	zinc finger protein 354C
chr3_-_163814799 Show fit	0.10	ENSRNOT00000055127	Znfx1 Links NCBI RGD Ensembl Show fit	zinc finger, NFX1-type containing 1
chr20_+_3242470 Show fit	0.10	ENSRNOT00000078110 ENSRNOT00000041502	RT1-T24-2 Links NCBI RGD Ensembl Show fit RT1-T24-1 Links NCBI RGD Ensembl Show fit	RT1 class I, locus T24, gene 2 RT1 class I, locus T24, gene 1
chr2_+_209097927 Show fit	0.10	ENSRNOT00000023807	Dennd2d Links NCBI RGD Ensembl Show fit	DENN domain containing 2D
chr7_-_139907640 Show fit	0.10	ENSRNOT00000045473	Zfp641 Links NCBI RGD Ensembl Show fit	zinc finger protein 641
chr6_+_127327959 Show fit	0.10	ENSRNOT00000012296	Ifi27 Links NCBI RGD Ensembl Show fit	interferon, alpha-inducible protein 27
chr8_+_33239139 Show fit	0.10	ENSRNOT00000011589	Arhgap32 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 32
chr10_+_89358376 Show fit	0.10	ENSRNOT00000028067	Ifi35 Links NCBI RGD Ensembl Show fit	interferon-induced protein 35
chr10_-_57064600 Show fit	0.10	ENSRNOT00000032926	Cxcl16 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 16
chr13_+_60435946 Show fit	0.09	ENSRNOT00000004342	B3galt2 Links NCBI RGD Ensembl Show fit	Beta-1,3-galactosyltransferase 2
chr4_+_67165883 Show fit	0.09	ENSRNOT00000012280	Rab19 Links NCBI RGD Ensembl Show fit	RAB19, member RAS oncogene family
chr13_+_89386023 Show fit	0.09	ENSRNOT00000086223	Fcgr3a Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor IIIa
chr10_+_76343847 Show fit	0.09	ENSRNOT00000055674	Trim25 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 25
chr18_+_55576239 Show fit	0.09	ENSRNOT00000050063	LOC100910979 Links NCBI RGD Ensembl Show fit	interferon-inducible GTPase 1-like
chr1_+_169433539 Show fit	0.09	ENSRNOT00000055210	Trim34 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 34
chr18_+_56364620 Show fit	0.09	ENSRNOT00000068535 ENSRNOT00000086033	Pdgfrb Links NCBI RGD Ensembl Show fit	platelet derived growth factor receptor beta
chr14_+_19319299 Show fit	0.09	ENSRNOT00000086542	Ankrd17 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 17
chr8_+_116754178 Show fit	0.09	ENSRNOT00000068295 ENSRNOT00000084429	Uba7 Links NCBI RGD Ensembl Show fit	ubiquitin-like modifier activating enzyme 7
chr17_+_36334147 Show fit	0.08	ENSRNOT00000050261	E2f3 Links NCBI RGD Ensembl Show fit	E2F transcription factor 3
chr7_-_117300662 Show fit	0.08	ENSRNOT00000006376	Parp10 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 10
chr1_+_255185629 Show fit	0.08	ENSRNOT00000083002	Hectd2 Links NCBI RGD Ensembl Show fit	HECT domain E3 ubiquitin protein ligase 2
chr15_+_34256071 Show fit	0.08	ENSRNOT00000025887	Psme1 Links NCBI RGD Ensembl Show fit	proteasome activator subunit 1
chr13_+_93684437 Show fit	0.08	ENSRNOT00000005005	Kmo Links NCBI RGD Ensembl Show fit	kynurenine 3-monooxygenase
chr6_+_135866739 Show fit	0.08	ENSRNOT00000013460	Exoc3l4 Links NCBI RGD Ensembl Show fit	exocyst complex component 3-like 4
chr1_+_215628785 Show fit	0.08	ENSRNOT00000054864	Lsp1 Links NCBI RGD Ensembl Show fit	lymphocyte-specific protein 1
chr3_-_72171078 Show fit	0.07	ENSRNOT00000009817	Serping1 Links NCBI RGD Ensembl Show fit	serpin family G member 1
chr9_+_119517101 Show fit	0.07	ENSRNOT00000020476	Lpin2 Links NCBI RGD Ensembl Show fit	lipin 2
chr4_-_120414118 Show fit	0.07	ENSRNOT00000072795	LOC100911337 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S25-like
chr3_+_161519743 Show fit	0.07	ENSRNOT00000055148	Cd40 Links NCBI RGD Ensembl Show fit	CD40 molecule
chr3_-_147809658 Show fit	0.07	ENSRNOT00000085995 ENSRNOT00000045314	Rbck1 Links NCBI RGD Ensembl Show fit	RANBP2-type and C3HC4-type zinc finger containing 1
chr16_-_85306366 Show fit	0.07	ENSRNOT00000089650	Tnfsf13b Links NCBI RGD Ensembl Show fit	tumor necrosis factor superfamily member 13b
chr3_-_48604097 Show fit	0.06	ENSRNOT00000009620	Ifih1 Links NCBI RGD Ensembl Show fit	interferon induced with helicase C domain 1
chr5_-_56536772 Show fit	0.06	ENSRNOT00000060765	Ddx58 Links NCBI RGD Ensembl Show fit	DEXD/H-box helicase 58
chr7_+_132857628 Show fit	0.06	ENSRNOT00000005438	Lrrk2 Links NCBI RGD Ensembl Show fit	leucine-rich repeat kinase 2
chr3_+_114087287 Show fit	0.06	ENSRNOT00000023017	B2m Links NCBI RGD Ensembl Show fit	beta-2 microglobulin
chr5_-_58183017 Show fit	0.06	ENSRNOT00000020982	Ccl19 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 19
chr10_+_90377103 Show fit	0.06	ENSRNOT00000040472	Grn Links NCBI RGD Ensembl Show fit	granulin precursor
chr10_-_107424710 Show fit	0.06	ENSRNOT00000004320	Lgals3bp Links NCBI RGD Ensembl Show fit	galectin 3 binding protein
chr7_-_144837583 Show fit	0.06	ENSRNOT00000055289	Cbx5 Links NCBI RGD Ensembl Show fit	chromobox 5
chr12_+_23514981 Show fit	0.06	ENSRNOT00000001937	Prkrip1 Links NCBI RGD Ensembl Show fit	Prkr interacting protein 1 (IL11 inducible)
chr12_+_41341417 Show fit	0.06	ENSRNOT00000072024 ENSRNOT00000091460	Oas2 Links NCBI RGD Ensembl Show fit	2'-5' oligoadenylate synthetase 2
chr10_-_88611105 Show fit	0.06	ENSRNOT00000024718	Dhx58 Links NCBI RGD Ensembl Show fit	DEXH-box helicase 58
chrX_+_11648989 Show fit	0.06	ENSRNOT00000041003	Bcor Links NCBI RGD Ensembl Show fit	BCL6 co-repressor
chr1_+_265298868 Show fit	0.05	ENSRNOT00000023278	Dpcd Links NCBI RGD Ensembl Show fit	deleted in primary ciliary dyskinesia
chr2_-_210550490 Show fit	0.05	ENSRNOT00000081835 ENSRNOT00000025222 ENSRNOT00000086403	Csf1 Links NCBI RGD Ensembl Show fit	colony stimulating factor 1
chr8_+_128133431 Show fit	0.05	ENSRNOT00000020174	Exog Links NCBI RGD Ensembl Show fit	exo/endonuclease G
chr10_+_90376933 Show fit	0.05	ENSRNOT00000028557	Grn Links NCBI RGD Ensembl Show fit	granulin precursor
chr7_-_140600818 Show fit	0.05	ENSRNOT00000082375	Lmbr1l Links NCBI RGD Ensembl Show fit	limb development membrane protein 1-like
chr15_+_36809361 Show fit	0.05	ENSRNOT00000076667	Parp4 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 4
chr18_+_64114933 Show fit	0.05	ENSRNOT00000022364	Mc5r Links NCBI RGD Ensembl Show fit	melanocortin 5 receptor
chr1_-_167093560 Show fit	0.05	ENSRNOT00000027301	Il18bp Links NCBI RGD Ensembl Show fit	interleukin 18 binding protein
chr5_+_113725717 Show fit	0.05	ENSRNOT00000032248	Tek Links NCBI RGD Ensembl Show fit	TEK receptor tyrosine kinase
chrX_-_14910727 Show fit	0.05	ENSRNOT00000085079 ENSRNOT00000030146	Ssx1 Links NCBI RGD Ensembl Show fit	SSX family member 1
chr8_-_62948720 Show fit	0.05	ENSRNOT00000075476	Islr Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily containing leucine-rich repeat
chr12_-_44962656 Show fit	0.04	ENSRNOT00000001499	Wsb2 Links NCBI RGD Ensembl Show fit	WD repeat and SOCS box-containing 2
chr14_+_113530470 Show fit	0.04	ENSRNOT00000004919	Pnpt1 Links NCBI RGD Ensembl Show fit	polyribonucleotide nucleotidyltransferase 1
chr2_+_263212051 Show fit	0.04	ENSRNOT00000089396	Negr1 Links NCBI RGD Ensembl Show fit	neuronal growth regulator 1
chr7_+_11878943 Show fit	0.04	ENSRNOT00000025634	Mob3a Links NCBI RGD Ensembl Show fit	MOB kinase activator 3A
chr20_+_3269284 Show fit	0.04	ENSRNOT00000089044	RT1-T24-1 Links NCBI RGD Ensembl Show fit	RT1 class I, locus T24, gene 1
chr8_-_85803433 Show fit	0.04	ENSRNOT00000081544 ENSRNOT00000073286	Mb21d1 Links NCBI RGD Ensembl Show fit	Mab-21 domain containing 1
chr10_+_55924938 Show fit	0.04	ENSRNOT00000087003 ENSRNOT00000057079	Trappc1 Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 1
chr1_-_252922486 Show fit	0.04	ENSRNOT00000076802	Ifit1bl Links NCBI RGD Ensembl Show fit	interferon-induced protein with tetratricopeptide repeats 1B-like
chr9_-_54351339 Show fit	0.04	ENSRNOT00000080522	Stat1 Links NCBI RGD Ensembl Show fit	signal transducer and activator of transcription 1
chr13_+_37400476 Show fit	0.04	ENSRNOT00000003435	Ccdc93 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 93
chr5_+_61564864 Show fit	0.04	ENSRNOT00000085738	Tdrd7 Links NCBI RGD Ensembl Show fit	tudor domain containing 7
chr2_-_28799266 Show fit	0.04	ENSRNOT00000089293	Tmem171 Links NCBI RGD Ensembl Show fit	transmembrane protein 171
chr5_+_61565439 Show fit	0.04	ENSRNOT00000089938	Tdrd7 Links NCBI RGD Ensembl Show fit	tudor domain containing 7
chr1_-_84353725 Show fit	0.04	ENSRNOT00000057177	Pld3 Links NCBI RGD Ensembl Show fit	phospholipase D family, member 3
chr10_+_57064482 Show fit	0.04	ENSRNOT00000046807	Zmynd15 Links NCBI RGD Ensembl Show fit	zinc finger, MYND-type containing 15
chr7_-_144837395 Show fit	0.04	ENSRNOT00000089024	Cbx5 Links NCBI RGD Ensembl Show fit	chromobox 5
chr3_-_2770620 Show fit	0.03	ENSRNOT00000008253	Traf2 Links NCBI RGD Ensembl Show fit	Tnf receptor-associated factor 2
chr12_-_41266430 Show fit	0.03	ENSRNOT00000001853 ENSRNOT00000081108	Oas1b Links NCBI RGD Ensembl Show fit	2-5 oligoadenylate synthetase 1B
chr1_-_102849430 Show fit	0.03	ENSRNOT00000086856	Saa4 Links NCBI RGD Ensembl Show fit	serum amyloid A4
chr6_-_21135880 Show fit	0.03	ENSRNOT00000051239	Rasgrp3 Links NCBI RGD Ensembl Show fit	RAS guanyl releasing protein 3
chr1_+_72810545 Show fit	0.03	ENSRNOT00000092117	Ptprh Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, H
chr1_+_64114721 Show fit	0.03	ENSRNOT00000080466	Tmc4 Links NCBI RGD Ensembl Show fit	transmembrane channel-like 4
chr12_-_47456894 Show fit	0.03	ENSRNOT00000001570	Oasl Links NCBI RGD Ensembl Show fit	2'-5'-oligoadenylate synthetase-like
chr1_+_255842783 Show fit	0.03	ENSRNOT00000023562	March5 Links NCBI RGD Ensembl Show fit	membrane associated ring-CH-type finger 5
chr10_-_5253336 Show fit	0.03	ENSRNOT00000085310	Ciita Links NCBI RGD Ensembl Show fit	class II, major histocompatibility complex, transactivator
chr10_-_110431792 Show fit	0.03	ENSRNOT00000054922	LOC619574 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC619574
chr1_+_166125474 Show fit	0.03	ENSRNOT00000091822	Fchsd2 Links NCBI RGD Ensembl Show fit	FCH and double SH3 domains 2
chrX_+_54390733 Show fit	0.03	ENSRNOT00000004977	RGD1565785 Links NCBI RGD Ensembl Show fit	similar to chromosome X open reading frame 21
chr13_-_83917001 Show fit	0.03	ENSRNOT00000004387 ENSRNOT00000082422	Rcsd1 Links NCBI RGD Ensembl Show fit	RCSD domain containing 1
chr7_-_118933812 Show fit	0.03	ENSRNOT00000031951	Apol9a Links NCBI RGD Ensembl Show fit	apolipoprotein L 9a
chr5_+_156603725 Show fit	0.03	ENSRNOT00000075852	Hp1bp3 Links NCBI RGD Ensembl Show fit	heterochromatin protein 1, binding protein 3
chr8_+_126411829 Show fit	0.02	ENSRNOT00000013450	Azi2 Links NCBI RGD Ensembl Show fit	5-azacytidine induced 2
chr5_+_128450680 Show fit	0.02	ENSRNOT00000010700	Txndc12 Links NCBI RGD Ensembl Show fit	thioredoxin domain containing 12
chr2_-_190100276 Show fit	0.02	ENSRNOT00000015351	S100a9 Links NCBI RGD Ensembl Show fit	S100 calcium binding protein A9
chr2_+_189062443 Show fit	0.02	ENSRNOT00000028181	Adar Links NCBI RGD Ensembl Show fit	adenosine deaminase, RNA-specific
chr5_+_141572536 Show fit	0.02	ENSRNOT00000023514	Rragc Links NCBI RGD Ensembl Show fit	Ras-related GTP binding C
chr9_-_88357182 Show fit	0.02	ENSRNOT00000041176	Col4a4 Links NCBI RGD Ensembl Show fit	collagen type IV alpha 4 chain
chr8_-_108261021 Show fit	0.02	ENSRNOT00000040710	LOC100912210 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S25-like
chr16_-_71203609 Show fit	0.02	ENSRNOT00000088458	Nsd3 Links NCBI RGD Ensembl Show fit	nuclear receptor binding SET domain protein 3
chr1_+_72756809 Show fit	0.02	ENSRNOT00000082423	Ppp6r1 Links NCBI RGD Ensembl Show fit	protein phosphatase 6, regulatory subunit 1
chr5_-_131860637 Show fit	0.02	ENSRNOT00000064569 ENSRNOT00000080242	Slc5a9 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 9
chr4_-_150485781 Show fit	0.02	ENSRNOT00000008763	Zfp248 Links NCBI RGD Ensembl Show fit	zinc finger protein 248
chr4_+_99449111 Show fit	0.02	ENSRNOT00000010253	Chmp3 Links NCBI RGD Ensembl Show fit	charged multivesicular body protein 3
chr12_+_42343123 Show fit	0.02	ENSRNOT00000043279	Oas1i Links NCBI RGD Ensembl Show fit	2 ' -5 ' oligoadenylate synthetase 1I
chr10_+_104377748 Show fit	0.02	ENSRNOT00000080714	Llgl2 Links NCBI RGD Ensembl Show fit	LLGL2, scribble cell polarity complex component
chr1_+_255564409 Show fit	0.02	ENSRNOT00000081786	Btaf1 Links NCBI RGD Ensembl Show fit	B-TFIID TATA-box binding protein associated factor 1
chr4_-_67162808 Show fit	0.01	ENSRNOT00000011915	Slc37a3 Links NCBI RGD Ensembl Show fit	solute carrier family 37, member 3
chrX_-_64702441 Show fit	0.01	ENSRNOT00000051132	Amer1 Links NCBI RGD Ensembl Show fit	APC membrane recruitment protein 1
chr20_+_8325041 Show fit	0.01	ENSRNOT00000000640	Cmtr1 Links NCBI RGD Ensembl Show fit	cap methyltransferase 1
chr11_+_67082193 Show fit	0.01	ENSRNOT00000003129	Cd86 Links NCBI RGD Ensembl Show fit	CD86 molecule
chr13_+_89385859 Show fit	0.01	ENSRNOT00000047434	Fcgr3a Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor IIIa
chr6_-_1466201 Show fit	0.01	ENSRNOT00000089185	Eif2ak2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2-alpha kinase 2
chr10_+_43613931 Show fit	0.01	ENSRNOT00000039335	Igtp Links NCBI RGD Ensembl Show fit	interferon gamma induced GTPase
chr7_+_122979021 Show fit	0.01	ENSRNOT00000085707	Zc3h7b Links NCBI RGD Ensembl Show fit	zinc finger CCCH-type containing 7B
chrX_-_154722220 Show fit	0.01	ENSRNOT00000089743 ENSRNOT00000087893	Fmr1 Links NCBI RGD Ensembl Show fit	fragile X mental retardation 1
chr1_+_277190964 Show fit	0.01	ENSRNOT00000080511	Casp7 Links NCBI RGD Ensembl Show fit	caspase 7
chr9_+_53004499 Show fit	0.01	ENSRNOT00000059233	Asnsd1 Links NCBI RGD Ensembl Show fit	asparagine synthetase domain containing 1
chrX_-_153039372 Show fit	0.01	ENSRNOT00000085250	Pnma5 Links NCBI RGD Ensembl Show fit	paraneoplastic Ma antigen family member 5
chr9_-_26932201 Show fit	0.01	ENSRNOT00000017081	Mcm3 Links NCBI RGD Ensembl Show fit	minichromosome maintenance complex component 3
chr5_-_24489468 Show fit	0.01	ENSRNOT00000081395	Ints8 Links NCBI RGD Ensembl Show fit	integrator complex subunit 8
chr4_-_120041238 Show fit	0.01	ENSRNOT00000073799	LOC100911337 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S25-like
chr2_+_148722231 Show fit	0.01	ENSRNOT00000018022	Eif2a Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2A
chr19_+_33160180 Show fit	0.01	ENSRNOT00000016422	Pou4f2 Links NCBI RGD Ensembl Show fit	POU class 4 homeobox 2
chr1_-_24056373 Show fit	0.01	ENSRNOT00000015566	Slc2a12 Links NCBI RGD Ensembl Show fit	solute carrier family 2 member 12
chr17_+_43661222 Show fit	0.01	ENSRNOT00000022881 ENSRNOT00000022809 ENSRNOT00000022810	Hfe Links NCBI RGD Ensembl Show fit	hemochromatosis
chr1_+_219439953 Show fit	0.01	ENSRNOT00000025282	Ppp1ca Links NCBI RGD Ensembl Show fit	protein phosphatase 1 catalytic subunit alpha
chr4_-_58250798 Show fit	0.00	ENSRNOT00000048436	Klf14 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 14
chr20_-_5476193 Show fit	0.00	ENSRNOT00000044975	Tapbp Links NCBI RGD Ensembl Show fit	TAP binding protein
chr16_+_18690649 Show fit	0.00	ENSRNOT00000015190	Mat1a Links NCBI RGD Ensembl Show fit	methionine adenosyltransferase 1A
chr5_+_154077944 Show fit	0.00	ENSRNOT00000031512	Il22ra1 Links NCBI RGD Ensembl Show fit	interleukin 22 receptor subunit alpha 1

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.5	GO:0007356	thorax and anterior abdomen determination(GO:0007356)
0.1	0.4	GO:0046967	cytosol to ER transport(GO:0046967) peptide antigen transport(GO:0046968)
0.1	0.3	GO:0042509	CD8-positive, alpha-beta T cell extravasation(GO:0035697) regulation of tyrosine phosphorylation of STAT protein(GO:0042509) positive regulation of tyrosine phosphorylation of STAT protein(GO:0042531)
0.1	0.4	GO:2001190	regulation of natural killer cell degranulation(GO:0043321) positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:2001190)
0.1	0.5	GO:0034124	regulation of MyD88-dependent toll-like receptor signaling pathway(GO:0034124)
0.1	0.2	GO:2000424	T-helper 1 cell lineage commitment(GO:0002296) negative regulation of complement-dependent cytotoxicity(GO:1903660) regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)
0.1	0.2	GO:0019086	late viral transcription(GO:0019086)
0.1	0.2	GO:1901252	regulation of intracellular transport of viral material(GO:1901252)
0.1	0.3	GO:0032020	ISG15-protein conjugation(GO:0032020)
0.1	0.5	GO:0071985	multivesicular body sorting pathway(GO:0071985)
0.1	0.2	GO:0001812	positive regulation of type I hypersensitivity(GO:0001812) peripheral B cell selection(GO:0002343) B cell affinity maturation(GO:0002344) cellular response to molecule of fungal origin(GO:0071226)
0.1	0.2	GO:0071691	cardiac muscle thin filament assembly(GO:0071691)
0.0	0.1	GO:1900245	positive regulation of MDA-5 signaling pathway(GO:1900245)
0.0	0.4	GO:0032621	interleukin-18 production(GO:0032621)
0.0	0.2	GO:0097026	dendritic cell dendrite assembly(GO:0097026)
0.0	0.4	GO:0003374	dynamin polymerization involved in membrane fission(GO:0003373) dynamin polymerization involved in mitochondrial fission(GO:0003374)
0.0	0.1	GO:0050713	negative regulation of interleukin-1 beta secretion(GO:0050713)
0.0	0.2	GO:1901509	regulation of endothelial tube morphogenesis(GO:1901509)
0.0	0.1	GO:1901423	response to benzene(GO:1901423)
0.0	0.2	GO:0052490	negative regulation by symbiont of host apoptotic process(GO:0033668) negative regulation by symbiont of host programmed cell death(GO:0052041) negative regulation by organism of programmed cell death in other organism involved in symbiotic interaction(GO:0052490)
0.0	0.1	GO:0002477	antigen processing and presentation of exogenous peptide antigen via MHC class Ib(GO:0002477) antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent(GO:0002481)
0.0	0.1	GO:0070212	regulation of chromatin assembly(GO:0010847) protein poly-ADP-ribosylation(GO:0070212)
0.0	0.1	GO:0038086	cell migration involved in vasculogenesis(GO:0035441) VEGF-activated platelet-derived growth factor receptor signaling pathway(GO:0038086) positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway(GO:0038091) metanephric glomerular mesangial cell proliferation involved in metanephros development(GO:0072262) metanephric glomerulus morphogenesis(GO:0072275) metanephric glomerulus vasculature morphogenesis(GO:0072276) metanephric glomerular capillary formation(GO:0072277)
0.0	0.1	GO:1902499	positive regulation of protein autoubiquitination(GO:1902499) regulation of peroxidase activity(GO:2000468)
0.0	0.2	GO:0045078	positive regulation of interferon-gamma biosynthetic process(GO:0045078)
0.0	0.1	GO:0019805	quinolinate biosynthetic process(GO:0019805)
0.0	0.2	GO:0035989	tendon development(GO:0035989)
0.0	0.1	GO:0035188	blastocyst hatching(GO:0001835) hatching(GO:0035188) organism emergence from protective structure(GO:0071684)
0.0	0.1	GO:0045351	type I interferon biosynthetic process(GO:0045351)
0.0	0.1	GO:0065001	specification of axis polarity(GO:0065001)
0.0	0.1	GO:0021678	third ventricle development(GO:0021678)
0.0	0.6	GO:0035458	cellular response to interferon-beta(GO:0035458)
0.0	0.1	GO:1904139	regulation of macrophage colony-stimulating factor signaling pathway(GO:1902226) regulation of response to macrophage colony-stimulating factor(GO:1903969) regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903972) microglial cell migration(GO:1904124) regulation of microglial cell migration(GO:1904139)
0.0	0.2	GO:0006957	complement activation, alternative pathway(GO:0006957)
0.0	0.2	GO:0051798	positive regulation of hair follicle development(GO:0051798)
0.0	0.1	GO:0060340	positive regulation of type I interferon-mediated signaling pathway(GO:0060340)
0.0	0.1	GO:0039530	MDA-5 signaling pathway(GO:0039530)
0.0	0.1	GO:0009597	detection of virus(GO:0009597)
0.0	0.0	GO:0048014	Tie signaling pathway(GO:0048014)
0.0	0.0	GO:1903721	regulation of I-kappaB phosphorylation(GO:1903719) positive regulation of I-kappaB phosphorylation(GO:1903721)
0.0	0.0	GO:0044565	dendritic cell proliferation(GO:0044565)
0.0	0.1	GO:0035457	cellular response to interferon-alpha(GO:0035457)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0005592	collagen type XI trimer(GO:0005592)
0.1	0.4	GO:0042825	TAP complex(GO:0042825)
0.0	0.2	GO:0020005	symbiont-containing vacuole membrane(GO:0020005)
0.0	0.1	GO:0008537	proteasome activator complex(GO:0008537)
0.0	0.1	GO:1990111	spermatoproteasome complex(GO:1990111)
0.0	0.2	GO:0008024	cyclin/CDK positive transcription elongation factor complex(GO:0008024)
0.0	0.1	GO:0042406	extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0	0.1	GO:1990682	CSF1-CSF1R complex(GO:1990682)
0.0	0.1	GO:0097487	multivesicular body, internal vesicle(GO:0097487)
0.0	0.0	GO:0045025	mitochondrial degradosome(GO:0045025)
0.0	0.1	GO:1990712	HFE-transferrin receptor complex(GO:1990712)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0046980	peptide antigen-transporting ATPase activity(GO:0015433) tapasin binding(GO:0046980)
0.1	0.9	GO:0001730	2'-5'-oligoadenylate synthetase activity(GO:0001730)
0.1	0.4	GO:0048030	disaccharide binding(GO:0048030)
0.1	0.3	GO:0048019	receptor antagonist activity(GO:0048019)
0.0	0.2	GO:0005136	interleukin-4 receptor binding(GO:0005136)
0.0	0.3	GO:0031386	protein tag(GO:0031386)
0.0	0.2	GO:0048248	CXCR3 chemokine receptor binding(GO:0048248)
0.0	0.1	GO:0003726	double-stranded RNA adenosine deaminase activity(GO:0003726)
0.0	0.1	GO:0031735	CCR10 chemokine receptor binding(GO:0031735)
0.0	0.1	GO:0005017	platelet-derived growth factor-activated receptor activity(GO:0005017)
0.0	0.2	GO:0042289	MHC class II protein binding(GO:0042289)
0.0	0.1	GO:0019767	IgE receptor activity(GO:0019767)
0.0	0.2	GO:0097322	7SK snRNA binding(GO:0097322)
0.0	0.5	GO:0003950	NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0	0.1	GO:0034211	GTP-dependent protein kinase activity(GO:0034211)
0.0	0.1	GO:0008499	UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity(GO:0008499)
0.0	0.1	GO:0005157	macrophage colony-stimulating factor receptor binding(GO:0005157)
0.0	0.1	GO:0071532	ankyrin repeat binding(GO:0071532)
0.0	0.2	GO:0008191	metalloendopeptidase inhibitor activity(GO:0008191)
0.0	0.2	GO:0017154	semaphorin receptor activity(GO:0017154)
0.0	0.0	GO:0004977	melanocortin receptor activity(GO:0004977)
0.0	0.1	GO:0061133	endopeptidase activator activity(GO:0061133)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	ST GA12 PATHWAY	G alpha 12 Pathway
0.0	0.2	PID IL27 PATHWAY	IL27-mediated signaling events
0.0	0.1	ST TYPE I INTERFERON PATHWAY	Type I Interferon (alpha/beta IFN) Pathway
0.0	0.2	SA MMP CYTOKINE CONNECTION	Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.
0.0	0.5	PID SYNDECAN 1 PATHWAY	Syndecan-1-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.5	REACTOME TRAF6 MEDIATED IRF7 ACTIVATION IN TLR7 8 OR 9 SIGNALING	Genes involved in TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
0.0	1.6	REACTOME INTERFERON ALPHA BETA SIGNALING	Genes involved in Interferon alpha/beta signaling
0.0	0.4	REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC	Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.0	0.3	REACTOME TRAF6 MEDIATED IRF7 ACTIVATION	Genes involved in TRAF6 mediated IRF7 activation
0.0	0.5	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.0	0.8	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.0	0.2	REACTOME REGULATION OF COMPLEMENT CASCADE	Genes involved in Regulation of Complement cascade