GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Tead1 Links NCBI RGD Ensembl	ENSRNOG00000015488	TEA domain transcription factor 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tead1	rn6_v1_chr1_+_177569618_177569618	-0.27	6.6e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr17_+_86408151 Show fit	0.06	ENSRNOT00000022734	Otud1 Links NCBI RGD Ensembl Show fit	OTU deubiquitinase 1
chr4_+_181286455 Show fit	0.05	ENSRNOT00000083633	Ppfibp1 Links NCBI RGD Ensembl Show fit	PPFIA binding protein 1
chr6_+_109617355 Show fit	0.04	ENSRNOT00000011599	Flvcr2 Links NCBI RGD Ensembl Show fit	feline leukemia virus subgroup C cellular receptor family, member 2
chr10_+_104523996 Show fit	0.03	ENSRNOT00000065339 ENSRNOT00000086747	Itgb4 Links NCBI RGD Ensembl Show fit	integrin subunit beta 4
chr7_-_52404774 Show fit	0.03	ENSRNOT00000082100	Nav3 Links NCBI RGD Ensembl Show fit	neuron navigator 3
chr13_-_86671515 Show fit	0.03	ENSRNOT00000082869	AABR07021704.1 Links NCBI RGD Ensembl Show fit
chr20_-_12820466 Show fit	0.03	ENSRNOT00000001699	Ftcd Links NCBI RGD Ensembl Show fit	formimidoyltransferase cyclodeaminase
chr3_-_23474170 Show fit	0.03	ENSRNOT00000039410	Scai Links NCBI RGD Ensembl Show fit	suppressor of cancer cell invasion
chr1_+_214203861 Show fit	0.03	ENSRNOT00000023219	Rassf7 Links NCBI RGD Ensembl Show fit	Ras association domain family member 7
chr2_-_140618405 Show fit	0.03	ENSRNOT00000017736	Setd7 Links NCBI RGD Ensembl Show fit	SET domain containing (lysine methyltransferase) 7
chr5_-_158439078 Show fit	0.03	ENSRNOT00000025517	Klhdc7a Links NCBI RGD Ensembl Show fit	kelch domain containing 7A
chr16_-_49820235 Show fit	0.03	ENSRNOT00000029628	Sorbs2 Links NCBI RGD Ensembl Show fit	sorbin and SH3 domain containing 2
chr19_+_54766589 Show fit	0.03	ENSRNOT00000025894	Banp Links NCBI RGD Ensembl Show fit	Btg3 associated nuclear protein
chr4_+_152892388 Show fit	0.03	ENSRNOT00000056198 ENSRNOT00000090218 ENSRNOT00000075895	Kdm5a Links NCBI RGD Ensembl Show fit	lysine demethylase 5A
chr5_+_59080765 Show fit	0.03	ENSRNOT00000021888 ENSRNOT00000064419	Rgp1 Links NCBI RGD Ensembl Show fit	RGP1 homolog, RAB6A GEF complex partner 1
chr10_-_104482838 Show fit	0.02	ENSRNOT00000007246	Recql5 Links NCBI RGD Ensembl Show fit	RecQ like helicase 5
chr1_-_131460473 Show fit	0.02	ENSRNOT00000084336	Nr2f2 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 2, group F, member 2
chr4_-_64981384 Show fit	0.02	ENSRNOT00000017338	Creb3l2 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 3-like 2
chr19_-_11341863 Show fit	0.02	ENSRNOT00000025694	Mt4 Links NCBI RGD Ensembl Show fit	metallothionein 4
chr1_-_18058055 Show fit	0.02	ENSRNOT00000020988	Ptprk Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, K
chr10_-_62699723 Show fit	0.02	ENSRNOT00000086706	Coro6 Links NCBI RGD Ensembl Show fit	coronin 6
chr1_+_192613372 Show fit	0.02	ENSRNOT00000016632	Cacng3 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit gamma 3
chr6_-_125060482 Show fit	0.02	ENSRNOT00000034961	Ppp4r3a Links NCBI RGD Ensembl Show fit	protein phosphatase 4, regulatory subunit 3A
chr11_+_64522130 Show fit	0.02	ENSRNOT00000004315	Upk1b Links NCBI RGD Ensembl Show fit	uroplakin 1B
chr19_+_43163129 Show fit	0.02	ENSRNOT00000073721	Clec18a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 18, member A
chr5_+_75392790 Show fit	0.02	ENSRNOT00000048457	Musk Links NCBI RGD Ensembl Show fit	muscle associated receptor tyrosine kinase
chr10_-_88874528 Show fit	0.02	ENSRNOT00000026783	Ptrf Links NCBI RGD Ensembl Show fit	polymerase I and transcript release factor
chr17_-_10004321 Show fit	0.02	ENSRNOT00000042394	Fgfr4 Links NCBI RGD Ensembl Show fit	fibroblast growth factor receptor 4
chr13_+_52662996 Show fit	0.02	ENSRNOT00000047682	Tnnt2 Links NCBI RGD Ensembl Show fit	troponin T2, cardiac type
chr7_-_140437467 Show fit	0.01	ENSRNOT00000087181	Fkbp11 Links NCBI RGD Ensembl Show fit	FK506 binding protein 11
chr9_-_52238564 Show fit	0.01	ENSRNOT00000005073	Col5a2 Links NCBI RGD Ensembl Show fit	collagen type V alpha 2 chain
chr4_+_152892599 Show fit	0.01	ENSRNOT00000079090	Kdm5a Links NCBI RGD Ensembl Show fit	lysine demethylase 5A
chr3_+_161433410 Show fit	0.01	ENSRNOT00000024657	Slc12a5 Links NCBI RGD Ensembl Show fit	solute carrier family 12 member 5
chr11_-_60679555 Show fit	0.01	ENSRNOT00000059735	Ccdc80 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 80
chr4_-_178168690 Show fit	0.01	ENSRNOT00000020729	Sox5 Links NCBI RGD Ensembl Show fit	SRY box 5
chr11_-_38351184 Show fit	0.01	ENSRNOT00000046318	Prdm15 Links NCBI RGD Ensembl Show fit	PR/SET domain 15
chr13_+_68709243 Show fit	0.01	ENSRNOT00000066419	Ivns1abp Links NCBI RGD Ensembl Show fit	influenza virus NS1A binding protein
chr6_-_76079283 Show fit	0.01	ENSRNOT00000082198	Ppp2r3c Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B'', gamma
chr1_+_101517714 Show fit	0.01	ENSRNOT00000028423	Plekha4 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A4
chr8_-_73194837 Show fit	0.01	ENSRNOT00000024885 ENSRNOT00000081450 ENSRNOT00000064613	Tln2 Links NCBI RGD Ensembl Show fit	talin 2
chr1_-_261371508 Show fit	0.01	ENSRNOT00000019978	Avpi1 Links NCBI RGD Ensembl Show fit	arginine vasopressin-induced 1
chr4_+_120672152 Show fit	0.01	ENSRNOT00000077231	Mgll Links NCBI RGD Ensembl Show fit	monoglyceride lipase
chr6_+_109617596 Show fit	0.01	ENSRNOT00000085031 ENSRNOT00000089972 ENSRNOT00000082402	Flvcr2 Links NCBI RGD Ensembl Show fit	feline leukemia virus subgroup C cellular receptor family, member 2
chr2_+_235596123 Show fit	0.01	ENSRNOT00000074816	Col25a1 Links NCBI RGD Ensembl Show fit	collagen type XXV alpha 1 chain
chr3_+_79860179 Show fit	0.01	ENSRNOT00000081160 ENSRNOT00000068444	Rapsn Links NCBI RGD Ensembl Show fit	receptor-associated protein of the synapse
chr1_+_46835971 Show fit	0.01	ENSRNOT00000066798	Synj2 Links NCBI RGD Ensembl Show fit	synaptojanin 2
chr10_-_70646495 Show fit	0.01	ENSRNOT00000071218	Gas2l2 Links NCBI RGD Ensembl Show fit	growth arrest-specific 2 like 2
chr19_+_43163562 Show fit	0.01	ENSRNOT00000048900	Clec18a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 18, member A
chr1_-_216703534 Show fit	0.01	ENSRNOT00000027972	Phlda2 Links NCBI RGD Ensembl Show fit	pleckstrin homology-like domain, family A, member 2
chrX_+_77119911 Show fit	0.01	ENSRNOT00000080141	Atp7a Links NCBI RGD Ensembl Show fit	ATPase copper transporting alpha
chr18_+_57286322 Show fit	0.01	ENSRNOT00000026174	Sh3tc2 Links NCBI RGD Ensembl Show fit	SH3 domain and tetratricopeptide repeats 2
chr2_-_189333015 Show fit	0.01	ENSRNOT00000076424 ENSRNOT00000076952	Hax1 Links NCBI RGD Ensembl Show fit	HCLS1 associated protein X-1
chr10_-_54323439 Show fit	0.01	ENSRNOT00000004946	Glp2r Links NCBI RGD Ensembl Show fit	glucagon-like peptide 2 receptor
chr13_+_74154835 Show fit	0.01	ENSRNOT00000059524	Abl2 Links NCBI RGD Ensembl Show fit	ABL proto-oncogene 2, non-receptor tyrosine kinase
chr7_-_75098331 Show fit	0.00	ENSRNOT00000013344	Rnf19a Links NCBI RGD Ensembl Show fit	ring finger protein 19A, RBR E3 ubiquitin protein ligase
chr17_-_62462644 Show fit	0.00	ENSRNOT00000024545	Ccny Links NCBI RGD Ensembl Show fit	cyclin Y
chr18_+_55797198 Show fit	0.00	ENSRNOT00000026334 ENSRNOT00000026394	Dctn4 Links NCBI RGD Ensembl Show fit	dynactin subunit 4
chr1_-_88908750 Show fit	0.00	ENSRNOT00000028297	Aplp1 Links NCBI RGD Ensembl Show fit	amyloid beta precursor like protein 1
chr9_-_94495333 Show fit	0.00	ENSRNOT00000021507	Kcnj13 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 13
chr3_+_80362858 Show fit	0.00	ENSRNOT00000021353 ENSRNOT00000086242	Lrp4 Links NCBI RGD Ensembl Show fit	LDL receptor related protein 4
chr1_-_100530183 Show fit	0.00	ENSRNOT00000067754	Mybpc2 Links NCBI RGD Ensembl Show fit	myosin binding protein C, fast-type
chr10_+_65591622 Show fit	0.00	ENSRNOT00000015207	Pigs Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class S
chr5_+_164796185 Show fit	0.00	ENSRNOT00000010779	Nppb Links NCBI RGD Ensembl Show fit	natriuretic peptide B
chr15_-_41890716 Show fit	0.00	ENSRNOT00000020419	Spryd7 Links NCBI RGD Ensembl Show fit	SPRY domain containing 7
chr3_-_79390956 Show fit	0.00	ENSRNOT00000077943	Ptprj Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, J
chr10_-_85636902 Show fit	0.00	ENSRNOT00000017241	Pcgf2 Links NCBI RGD Ensembl Show fit	polycomb group ring finger 2
chr12_+_48316143 Show fit	0.00	ENSRNOT00000084511	Svop Links NCBI RGD Ensembl Show fit	SV2 related protein
chr8_+_111210811 Show fit	0.00	ENSRNOT00000011347	Amotl2 Links NCBI RGD Ensembl Show fit	angiomotin like 2
chr8_-_61595032 Show fit	0.00	ENSRNOT00000023428	Snx33 Links NCBI RGD Ensembl Show fit	sorting nexin 33
chr13_+_26172243 Show fit	0.00	ENSRNOT00000003840	Phlpp1 Links NCBI RGD Ensembl Show fit	PH domain and leucine rich repeat protein phosphatase 1
chr6_-_122721496 Show fit	0.00	ENSRNOT00000079697	Ptpn21 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 21
chr9_-_55256340 Show fit	0.00	ENSRNOT00000028907	Sdpr Links NCBI RGD Ensembl Show fit	serum deprivation response
chr5_+_28850950 Show fit	0.00	ENSRNOT00000009759	Tmem64 Links NCBI RGD Ensembl Show fit	transmembrane protein 64
chr9_+_15166118 Show fit	0.00	ENSRNOT00000020432	Mdfi Links NCBI RGD Ensembl Show fit	MyoD family inhibitor

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:1901726	negative regulation of histone deacetylase activity(GO:1901726)
0.0	0.0	GO:0043606	formate metabolic process(GO:0015942) histidine catabolic process to glutamate and formamide(GO:0019556) formamide metabolic process(GO:0043606)