GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Zbtb12 Links NCBI RGD Ensembl	ENSRNOG00000000418	zinc finger and BTB domain containing 12

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zbtb12	rn6_v1_chr20_+_4572100_4572100	0.03	9.7e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_+_187447501 Show fit	0.13	ENSRNOT00000038589	Iqgap3 Links NCBI RGD Ensembl Show fit	IQ motif containing GTPase activating protein 3
chr12_-_19254527 Show fit	0.12	ENSRNOT00000089349	AABR07035541.3 Links NCBI RGD Ensembl Show fit
chr2_-_265300868 Show fit	0.10	ENSRNOT00000066024 ENSRNOT00000016073 ENSRNOT00000033502	Lrrc7 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 7
chr13_+_71656651 Show fit	0.08	ENSRNOT00000050365	Zfp648 Links NCBI RGD Ensembl Show fit	zinc finger protein 648
chrX_-_121731543 Show fit	0.08	ENSRNOT00000018788	Klhl13 Links NCBI RGD Ensembl Show fit	kelch-like family member 13
chr12_+_47074200 Show fit	0.07	ENSRNOT00000014910	Dynll1 Links NCBI RGD Ensembl Show fit	dynein light chain LC8-type 1
chr1_+_81763614 Show fit	0.07	ENSRNOT00000027254	Cd79a Links NCBI RGD Ensembl Show fit	CD79a molecule
chr1_-_266333105 Show fit	0.06	ENSRNOT00000027093	Arl3 Links NCBI RGD Ensembl Show fit	ADP ribosylation factor like GTPase 3
chr19_-_37819789 Show fit	0.06	ENSRNOT00000036702	Cenpt Links NCBI RGD Ensembl Show fit	centromere protein T
chr10_-_29026002 Show fit	0.05	ENSRNOT00000005070	Pttg1 Links NCBI RGD Ensembl Show fit	pituitary tumor-transforming 1
chr1_-_141349881 Show fit	0.05	ENSRNOT00000021109	Rhcg Links NCBI RGD Ensembl Show fit	Rh family, C glycoprotein
chr1_+_80135391 Show fit	0.05	ENSRNOT00000021893	Gpr4 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 4
chrX_-_112328642 Show fit	0.05	ENSRNOT00000083150	Psmd10 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 10
chr3_+_101899068 Show fit	0.05	ENSRNOT00000079600 ENSRNOT00000006256	Muc15 Links NCBI RGD Ensembl Show fit	mucin 15, cell surface associated
chr18_-_68983619 Show fit	0.05	ENSRNOT00000014670	LOC361346 Links NCBI RGD Ensembl Show fit	similar to chromosome 18 open reading frame 54
chr13_-_97282299 Show fit	0.04	ENSRNOT00000004244	Mixl1 Links NCBI RGD Ensembl Show fit	Mix paired-like homeobox 1
chr20_+_3178250 Show fit	0.04	ENSRNOT00000082116	RT1-S3 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus S3
chr3_+_162357356 Show fit	0.04	ENSRNOT00000030119	Eya2 Links NCBI RGD Ensembl Show fit	EYA transcriptional coactivator and phosphatase 2
chr9_+_40817654 Show fit	0.04	ENSRNOT00000037392	AABR07067339.1 Links NCBI RGD Ensembl Show fit
chr7_-_140580783 Show fit	0.04	ENSRNOT00000087327	Dhh Links NCBI RGD Ensembl Show fit	desert hedgehog
chr3_-_123997277 Show fit	0.04	ENSRNOT00000058238	RGD1564425 Links NCBI RGD Ensembl Show fit	similar to Proteasome subunit beta type 3 (Proteasome theta chain)
chr1_-_78626284 Show fit	0.04	ENSRNOT00000052299	LOC108349752 Links NCBI RGD Ensembl Show fit	carcinoembryonic antigen-related cell adhesion molecule 3-like
chr15_-_39705208 Show fit	0.04	ENSRNOT00000015412	Phf11 Links NCBI RGD Ensembl Show fit	PHD finger protein 11
chr3_+_100787449 Show fit	0.04	ENSRNOT00000078543	Bdnf Links NCBI RGD Ensembl Show fit	brain-derived neurotrophic factor
chr3_-_165537940 Show fit	0.04	ENSRNOT00000071119 ENSRNOT00000070964	Sall4 Links NCBI RGD Ensembl Show fit	spalt-like transcription factor 4
chr4_+_7258176 Show fit	0.04	ENSRNOT00000061992	Tmub1 Links NCBI RGD Ensembl Show fit	transmembrane and ubiquitin-like domain containing 1
chr7_+_123482255 Show fit	0.04	ENSRNOT00000064487	LOC688613 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC688613
chr19_-_26946044 Show fit	0.04	ENSRNOT00000090756	AABR07043271.1 Links NCBI RGD Ensembl Show fit
chr15_-_61772516 Show fit	0.03	ENSRNOT00000015605 ENSRNOT00000093399	Wbp4 Links NCBI RGD Ensembl Show fit	WW domain binding protein 4
chr10_+_99437436 Show fit	0.03	ENSRNOT00000006254	Kcnj2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 2
chr2_+_113984824 Show fit	0.03	ENSRNOT00000086399	Tnik Links NCBI RGD Ensembl Show fit	TRAF2 and NCK interacting kinase
chr18_+_68983545 Show fit	0.03	ENSRNOT00000085317	Stard6 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 6
chr8_+_39164916 Show fit	0.03	ENSRNOT00000011309	Acrv1 Links NCBI RGD Ensembl Show fit	acrosomal vesicle protein 1
chr1_+_83003841 Show fit	0.03	ENSRNOT00000057384	Ceacam4 Links NCBI RGD Ensembl Show fit	carcinoembryonic antigen-related cell adhesion molecule 4
chr6_+_104068547 Show fit	0.03	ENSRNOT00000006460	Galnt16 Links NCBI RGD Ensembl Show fit	polypeptide N-acetylgalactosaminyltransferase 16
chr11_-_29710849 Show fit	0.03	ENSRNOT00000029345	Krtap11-1 Links NCBI RGD Ensembl Show fit	keratin associated protein 11-1
chr19_-_26243223 Show fit	0.03	ENSRNOT00000037766	Zfp791 Links NCBI RGD Ensembl Show fit	zinc finger protein 791
chr8_-_73122740 Show fit	0.03	ENSRNOT00000012026	Tln2 Links NCBI RGD Ensembl Show fit	talin 2
chr6_-_91518996 Show fit	0.03	ENSRNOT00000005835	Pole2 Links NCBI RGD Ensembl Show fit	DNA polymerase epsilon 2, accessory subunit
chr9_+_17041389 Show fit	0.03	ENSRNOT00000025598	Abcc10 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily C member 10
chr3_+_100786862 Show fit	0.03	ENSRNOT00000080190	Bdnf Links NCBI RGD Ensembl Show fit	brain-derived neurotrophic factor
chr6_-_36940868 Show fit	0.03	ENSRNOT00000006470	Gen1 Links NCBI RGD Ensembl Show fit	GEN1 Holliday junction 5' flap endonuclease
chr7_-_117722359 Show fit	0.03	ENSRNOT00000019876	Cyhr1 Links NCBI RGD Ensembl Show fit	cysteine and histidine rich 1
chr1_+_103145939 Show fit	0.03	ENSRNOT00000040529	AABR07003273.1 Links NCBI RGD Ensembl Show fit
chr19_+_26416818 Show fit	0.03	ENSRNOT00000040473	AABR07043200.1 Links NCBI RGD Ensembl Show fit
chr3_+_55886695 Show fit	0.02	ENSRNOT00000009396	Bbs5 Links NCBI RGD Ensembl Show fit	Bardet-Biedl syndrome 5
chr1_+_266333440 Show fit	0.02	ENSRNOT00000071243	Sfxn2 Links NCBI RGD Ensembl Show fit	sideroflexin 2
chr9_-_14550625 Show fit	0.02	ENSRNOT00000078227	Oard1 Links NCBI RGD Ensembl Show fit	O-acyl-ADP-ribose deacylase 1
chr11_-_64855353 Show fit	0.02	ENSRNOT00000089625	Cd80 Links NCBI RGD Ensembl Show fit	Cd80 molecule
chr6_+_129609074 Show fit	0.02	ENSRNOT00000064957	Papola Links NCBI RGD Ensembl Show fit	poly (A) polymerase alpha
chr1_+_213597478 Show fit	0.02	ENSRNOT00000017562	Odf3 Links NCBI RGD Ensembl Show fit	outer dense fiber of sperm tails 3
chr2_+_206314213 Show fit	0.02	ENSRNOT00000056068	Bcl2l15 Links NCBI RGD Ensembl Show fit	BCL2-like 15
chr16_+_9907598 Show fit	0.02	ENSRNOT00000027352	Ptpn20 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 20
chr1_+_81643816 Show fit	0.02	ENSRNOT00000027214	LOC103689942 Links NCBI RGD Ensembl Show fit	carcinoembryonic antigen-related cell adhesion molecule 1-like
chr20_-_5805627 Show fit	0.02	ENSRNOT00000085996	Clps Links NCBI RGD Ensembl Show fit	colipase
chr3_+_8928534 Show fit	0.02	ENSRNOT00000088509 ENSRNOT00000065300	Miga2 Links NCBI RGD Ensembl Show fit	mitoguardin 2
chr6_+_129609375 Show fit	0.02	ENSRNOT00000083732	Papola Links NCBI RGD Ensembl Show fit	poly (A) polymerase alpha
chr12_+_37829579 Show fit	0.02	ENSRNOT00000084587	Pitpnm2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol transfer protein, membrane-associated 2
chr3_+_47677720 Show fit	0.02	ENSRNOT00000065340	Tbr1 Links NCBI RGD Ensembl Show fit	T-box, brain, 1
chr3_-_23353425 Show fit	0.02	ENSRNOT00000019703	Golga1 Links NCBI RGD Ensembl Show fit	golgin A1
chr1_+_198409360 Show fit	0.02	ENSRNOT00000013691 ENSRNOT00000091295	Cdipt Links NCBI RGD Ensembl Show fit	CDP-diacylglycerol--inositol 3-phosphatidyltransferase
chr4_-_51598771 Show fit	0.01	ENSRNOT00000008325	Ndufa5 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit A5
chr1_-_216971183 Show fit	0.01	ENSRNOT00000077911	Mrgpre Links NCBI RGD Ensembl Show fit	MAS related GPR family member E
chr19_-_26129619 Show fit	0.01	ENSRNOT00000067600	Best2 Links NCBI RGD Ensembl Show fit	bestrophin 2
chrX_+_6430594 Show fit	0.01	ENSRNOT00000044009	Maob Links NCBI RGD Ensembl Show fit	monoamine oxidase B
chr2_-_250862419 Show fit	0.01	ENSRNOT00000017943	Clca4 Links NCBI RGD Ensembl Show fit	chloride channel accessory 4
chr5_-_58106706 Show fit	0.01	ENSRNOT00000019561	Dctn3 Links NCBI RGD Ensembl Show fit	dynactin subunit 3
chr20_+_19325121 Show fit	0.01	ENSRNOT00000058151	Phyhipl Links NCBI RGD Ensembl Show fit	phytanoyl-CoA 2-hydroxylase interacting protein-like
chr10_+_90988732 Show fit	0.01	ENSRNOT00000003892	FAM187A Links NCBI RGD Ensembl Show fit	family with sequence similarity 187, member A
chr1_-_225035687 Show fit	0.01	ENSRNOT00000026539	Gng3 Links NCBI RGD Ensembl Show fit	G protein subunit gamma 3
chr9_-_61690956 Show fit	0.01	ENSRNOT00000066589	Hspd1 Links NCBI RGD Ensembl Show fit	heat shock protein family D member 1
chr15_-_33775109 Show fit	0.01	ENSRNOT00000033722	Jph4 Links NCBI RGD Ensembl Show fit	junctophilin 4
chr7_-_123586919 Show fit	0.01	ENSRNOT00000011484	Ndufa6 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit A6
chr7_-_117721955 Show fit	0.01	ENSRNOT00000019853	Cyhr1 Links NCBI RGD Ensembl Show fit	cysteine and histidine rich 1
chr3_+_28416954 Show fit	0.01	ENSRNOT00000043533	Kynu Links NCBI RGD Ensembl Show fit	kynureninase
chr1_+_280423079 Show fit	0.01	ENSRNOT00000011983	Slc18a2 Links NCBI RGD Ensembl Show fit	solute carrier family 18 member A2
chr6_+_22296128 Show fit	0.01	ENSRNOT00000087805	Dpy30 Links NCBI RGD Ensembl Show fit	dpy-30 histone methyltransferase complex regulatory subunit
chr10_-_86509454 Show fit	0.01	ENSRNOT00000009454	Ikzf3 Links NCBI RGD Ensembl Show fit	IKAROS family zinc finger 3
chr8_+_87205311 Show fit	0.01	ENSRNOT00000014449	LOC100363289 Links NCBI RGD Ensembl Show fit	LRRGT00022-like
chr3_-_113130058 Show fit	0.01	ENSRNOT00000046391 ENSRNOT00000035889	Zscan29 Links NCBI RGD Ensembl Show fit	zinc finger and SCAN domain containing 29
chr1_+_189328246 Show fit	0.01	ENSRNOT00000084260	Acsm1 Links NCBI RGD Ensembl Show fit	acyl-CoA synthetase medium-chain family member 1
chr10_-_5253336 Show fit	0.01	ENSRNOT00000085310	Ciita Links NCBI RGD Ensembl Show fit	class II, major histocompatibility complex, transactivator
chr6_-_96202477 Show fit	0.01	ENSRNOT00000046585	LOC688981 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L26 (Silica-induced gene 20 protein) (SIG-20)
chr1_+_166428761 Show fit	0.01	ENSRNOT00000085555	Stard10 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 10
chr2_+_187977008 Show fit	0.01	ENSRNOT00000081531 ENSRNOT00000092951	Arhgef2 Links NCBI RGD Ensembl Show fit	Rho/Rac guanine nucleotide exchange factor 2
chr1_-_57327379 Show fit	0.01	ENSRNOT00000080429	Dll1 Links NCBI RGD Ensembl Show fit	delta like canonical Notch ligand 1
chr10_-_88357025 Show fit	0.01	ENSRNOT00000080006	Nt5c3b Links NCBI RGD Ensembl Show fit	5'-nucleotidase, cytosolic IIIB
chr7_-_139731876 Show fit	0.01	ENSRNOT00000013704	Asb8 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 8
chr7_+_123573930 Show fit	0.00	ENSRNOT00000066149	Fam109b Links NCBI RGD Ensembl Show fit	family with sequence similarity 109, member B
chr9_-_81565416 Show fit	0.00	ENSRNOT00000083582	Aamp Links NCBI RGD Ensembl Show fit	angio-associated, migratory cell protein
chr2_-_22059149 Show fit	0.00	ENSRNOT00000031909	Fam151b Links NCBI RGD Ensembl Show fit	family with sequence similarity 151, member B
chr14_-_108412823 Show fit	0.00	ENSRNOT00000081405	Pex13 Links NCBI RGD Ensembl Show fit	peroxisomal biogenesis factor 13
chr10_-_88356538 Show fit	0.00	ENSRNOT00000022430	Nt5c3b Links NCBI RGD Ensembl Show fit	5'-nucleotidase, cytosolic IIIB
chr18_-_40716686 Show fit	0.00	ENSRNOT00000000172	Cdo1 Links NCBI RGD Ensembl Show fit	cysteine dioxygenase type 1
chr6_+_145740035 Show fit	0.00	ENSRNOT00000064868	Cdca7l Links NCBI RGD Ensembl Show fit	cell division cycle associated 7 like
chr20_-_12820466 Show fit	0.00	ENSRNOT00000001699	Ftcd Links NCBI RGD Ensembl Show fit	formimidoyltransferase cyclodeaminase
chr10_-_49007089 Show fit	0.00	ENSRNOT00000073706	Mapk7 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 7

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0070634	transepithelial ammonium transport(GO:0070634)
0.0	0.0	GO:0070682	proteasome regulatory particle assembly(GO:0070682)
0.0	0.0	GO:0002489	antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway(GO:0002488) antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent(GO:0002489) TRAIL production(GO:0032639) regulation of TRAIL production(GO:0032679) positive regulation of TRAIL production(GO:0032759)
0.0	0.0	GO:0030908	intein-mediated protein splicing(GO:0016539) protein splicing(GO:0030908)
0.0	0.1	GO:0033601	positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.0	0.1	GO:0072144	glomerular mesangial cell development(GO:0072144)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0019815	B cell receptor complex(GO:0019815)
0.0	0.0	GO:0032398	MHC class Ib protein complex(GO:0032398)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0032027	myosin light chain binding(GO:0032027)