GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Zbtb7c Links NCBI RGD Ensembl	ENSRNOG00000047924	zinc finger and BTB domain containing 7C

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zbtb7c	rn6_v1_chr18_+_72005581_72005581	0.15	8.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_-_80221710 Show fit	0.11	ENSRNOT00000091687	Fosb Links NCBI RGD Ensembl Show fit	FosB proto-oncogene, AP-1 transcription factor subunit
chr1_-_80221417 Show fit	0.11	ENSRNOT00000072149	Fosb Links NCBI RGD Ensembl Show fit	FosB proto-oncogene, AP-1 transcription factor subunit
chr4_+_32373641 Show fit	0.11	ENSRNOT00000076086	Dlx6 Links NCBI RGD Ensembl Show fit	distal-less homeobox 6
chr7_-_70552897 Show fit	0.09	ENSRNOT00000080594	Kif5a Links NCBI RGD Ensembl Show fit	kinesin family member 5A
chr10_+_35279236 Show fit	0.06	ENSRNOT00000003770	Gfpt2 Links NCBI RGD Ensembl Show fit	glutamine-fructose-6-phosphate transaminase 2
chr10_-_88050622 Show fit	0.06	ENSRNOT00000019037	Krt15 Links NCBI RGD Ensembl Show fit	keratin 15
chr5_-_36683356 Show fit	0.06	ENSRNOT00000009043	Pou3f2 Links NCBI RGD Ensembl Show fit	POU class 3 homeobox 2
chr2_-_24923128 Show fit	0.05	ENSRNOT00000044087	Pde8b Links NCBI RGD Ensembl Show fit	phosphodiesterase 8B
chr1_+_104576589 Show fit	0.05	ENSRNOT00000046529	Nav2 Links NCBI RGD Ensembl Show fit	neuron navigator 2
chr12_-_37425596 Show fit	0.05	ENSRNOT00000084553	Tctn2 Links NCBI RGD Ensembl Show fit	tectonic family member 2
chr5_+_152681101 Show fit	0.05	ENSRNOT00000076052 ENSRNOT00000022574	Stmn1 Links NCBI RGD Ensembl Show fit	stathmin 1
chr10_+_57185347 Show fit	0.05	ENSRNOT00000040488 ENSRNOT00000086374	Mink1 Links NCBI RGD Ensembl Show fit	misshapen-like kinase 1
chr20_+_4572100 Show fit	0.04	ENSRNOT00000000476	Zbtb12 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 12
chr9_-_43022998 Show fit	0.04	ENSRNOT00000063781 ENSRNOT00000089843	Lman2l Links NCBI RGD Ensembl Show fit	lectin, mannose-binding 2-like
chr1_+_169590308 Show fit	0.04	ENSRNOT00000023147	Olr155 Links NCBI RGD Ensembl Show fit	olfactory receptor 155
chr1_-_220644636 Show fit	0.04	ENSRNOT00000027632	Pacs1 Links NCBI RGD Ensembl Show fit	phosphofurin acidic cluster sorting protein 1
chr13_-_88536728 Show fit	0.04	ENSRNOT00000003950	Uhmk1 Links NCBI RGD Ensembl Show fit	U2AF homology motif kinase 1
chr10_-_13580821 Show fit	0.03	ENSRNOT00000009735	Ntn3 Links NCBI RGD Ensembl Show fit	netrin 3
chr10_+_20320878 Show fit	0.03	ENSRNOT00000009714	Slit3 Links NCBI RGD Ensembl Show fit	slit guidance ligand 3
chr10_-_56008885 Show fit	0.03	ENSRNOT00000067677	Kdm6b Links NCBI RGD Ensembl Show fit	lysine demethylase 6B
chr3_-_72445775 Show fit	0.02	ENSRNOT00000033427 ENSRNOT00000077573	P2rx3 Links NCBI RGD Ensembl Show fit	purinergic receptor P2X 3
chr13_-_70783515 Show fit	0.02	ENSRNOT00000003605	Lamc1 Links NCBI RGD Ensembl Show fit	laminin subunit gamma 1
chrX_-_158739838 Show fit	0.02	ENSRNOT00000003091	Phf6 Links NCBI RGD Ensembl Show fit	PHD finger protein 6
chr3_-_72447801 Show fit	0.02	ENSRNOT00000088815	P2rx3 Links NCBI RGD Ensembl Show fit	purinergic receptor P2X 3
chr3_+_155297566 Show fit	0.02	ENSRNOT00000021435 ENSRNOT00000084866	Dhx35 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 35
chr15_-_34693034 Show fit	0.02	ENSRNOT00000083314	Mcpt8 Links NCBI RGD Ensembl Show fit	mast cell protease 8
chr8_+_72029489 Show fit	0.02	ENSRNOT00000089336	Herc1 Links NCBI RGD Ensembl Show fit	HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
chr3_-_95418679 Show fit	0.02	ENSRNOT00000018074	Rcn1 Links NCBI RGD Ensembl Show fit	reticulocalbin 1
chrX_-_128268285 Show fit	0.02	ENSRNOT00000009755 ENSRNOT00000081880	Thoc2 Links NCBI RGD Ensembl Show fit	THO complex 2
chr13_-_72367980 Show fit	0.02	ENSRNOT00000003928	Cacna1e Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 E
chr5_+_22392732 Show fit	0.02	ENSRNOT00000087182	Clvs1 Links NCBI RGD Ensembl Show fit	clavesin 1
chr10_+_92289107 Show fit	0.02	ENSRNOT00000050070	Mapt Links NCBI RGD Ensembl Show fit	microtubule-associated protein tau
chr10_+_55013703 Show fit	0.02	ENSRNOT00000032785	Pik3r5 Links NCBI RGD Ensembl Show fit	phosphoinositide-3-kinase, regulatory subunit 5
chr17_-_44420596 Show fit	0.02	ENSRNOT00000077512	RGD1561897 Links NCBI RGD Ensembl Show fit	similar to Serine/threonine-protein kinase Kist (Kinase interacting with stathmin)
chr10_-_88754829 Show fit	0.02	ENSRNOT00000026354	Stat5b Links NCBI RGD Ensembl Show fit	signal transducer and activator of transcription 5B
chr3_-_113231790 Show fit	0.02	ENSRNOT00000019025	Tp53bp1 Links NCBI RGD Ensembl Show fit	tumor protein p53 binding protein 1
chr5_-_139921013 Show fit	0.02	ENSRNOT00000079957	Smap2 Links NCBI RGD Ensembl Show fit	small ArfGAP2
chr12_+_21981755 Show fit	0.02	ENSRNOT00000001871	LOC100910540 Links NCBI RGD Ensembl Show fit	7SK snRNA methylphosphate capping enzyme-like
chr18_-_28454756 Show fit	0.02	ENSRNOT00000040091	Spata24 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 24
chr20_-_32269145 Show fit	0.01	ENSRNOT00000000446	Ddx50 Links NCBI RGD Ensembl Show fit	DExD-box helicase 50
chr14_+_38192870 Show fit	0.01	ENSRNOT00000077080	Nfxl1 Links NCBI RGD Ensembl Show fit	nuclear transcription factor, X-box binding-like 1
chr14_-_1632378 Show fit	0.01	ENSRNOT00000000080	Dr1 Links NCBI RGD Ensembl Show fit	down-regulator of transcription 1
chr1_+_224824799 Show fit	0.01	ENSRNOT00000024757	Slc22a6 Links NCBI RGD Ensembl Show fit	solute carrier family 22 member 6
chr14_-_2474780 Show fit	0.01	ENSRNOT00000074874	LOC100910207 Links NCBI RGD Ensembl Show fit	protein Dr1-like
chr15_+_104095179 Show fit	0.01	ENSRNOT00000093487	Cldn10 Links NCBI RGD Ensembl Show fit	claudin 10
chr10_+_59360765 Show fit	0.01	ENSRNOT00000036278	Zzef1 Links NCBI RGD Ensembl Show fit	zinc finger ZZ-type and EF-hand domain containing 1
chr10_-_59360661 Show fit	0.01	ENSRNOT00000036942	Cyb5d2 Links NCBI RGD Ensembl Show fit	cytochrome b5 domain containing 2
chr1_-_259106948 Show fit	0.01	ENSRNOT00000074429	LOC100912537 Links NCBI RGD Ensembl Show fit	tectonic-3-like
chr11_+_14005732 Show fit	0.01	ENSRNOT00000047240	Rbm11 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 11
chr18_-_40134504 Show fit	0.01	ENSRNOT00000022294	Trim36 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 36
chr4_+_133285552 Show fit	0.01	ENSRNOT00000029115	Ppp4r2 Links NCBI RGD Ensembl Show fit	protein phosphatase 4, regulatory subunit 2
chr10_+_65448950 Show fit	0.01	ENSRNOT00000082348 ENSRNOT00000037016	Rab34 Links NCBI RGD Ensembl Show fit	RAB34, member RAS oncogene family
chr3_+_146582752 Show fit	0.01	ENSRNOT00000010157	Pygb Links NCBI RGD Ensembl Show fit	glycogen phosphorylase B
chr19_+_25969255 Show fit	0.01	ENSRNOT00000004370	Farsa Links NCBI RGD Ensembl Show fit	phenylalanyl-tRNA synthetase, alpha subunit
chr1_+_100447998 Show fit	0.01	ENSRNOT00000026259	Lrrc4b Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 4B
chr1_+_156262031 Show fit	0.01	ENSRNOT00000038279	Tmem126b Links NCBI RGD Ensembl Show fit	transmembrane protein 126B
chr20_-_6960481 Show fit	0.00	ENSRNOT00000093172	Mtch1 Links NCBI RGD Ensembl Show fit	mitochondrial carrier 1
chr5_-_59001800 Show fit	0.00	ENSRNOT00000031336	Arhgef39 Links NCBI RGD Ensembl Show fit	Rho guanine nucleotide exchange factor 39
chr1_+_142136452 Show fit	0.00	ENSRNOT00000016445	Hddc3 Links NCBI RGD Ensembl Show fit	HD domain containing 3
chr10_-_88107232 Show fit	0.00	ENSRNOT00000019330 ENSRNOT00000076770	Krt9 Links NCBI RGD Ensembl Show fit	keratin 9
chr19_+_30668602 Show fit	0.00	ENSRNOT00000035084	Usp38 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 38
chr1_+_176854816 Show fit	0.00	ENSRNOT00000087461	Usp47 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 47
chr8_+_73682887 Show fit	0.00	ENSRNOT00000057522	Vps13c Links NCBI RGD Ensembl Show fit	vacuolar protein sorting 13C
chr7_+_53878610 Show fit	0.00	ENSRNOT00000091910	Osbpl8 Links NCBI RGD Ensembl Show fit	oxysterol binding protein-like 8
chr14_-_78308933 Show fit	0.00	ENSRNOT00000065334	Crmp1 Links NCBI RGD Ensembl Show fit	collapsin response mediator protein 1
chr10_+_57239993 Show fit	0.00	ENSRNOT00000067919	LOC687707 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC687707

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0098971	anterograde dendritic transport of neurotransmitter receptor complex(GO:0098971)
0.0	0.1	GO:0021564	vagus nerve development(GO:0021564)
0.0	0.0	GO:0070494	regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495)
0.0	0.1	GO:0035106	operant conditioning(GO:0035106)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0070548	L-glutamine aminotransferase activity(GO:0070548)