GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Zfp691 Links NCBI RGD Ensembl	ENSRNOG00000007398	zinc finger protein 691

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zfp691	rn6_v1_chr5_-_138222534_138222534	0.95	1.4e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_-_37250919 Show fit	0.11	ENSRNOT00000021015	Exoc3l1 Links NCBI RGD Ensembl Show fit	exocyst complex component 3-like 1
chr12_-_30304036 Show fit	0.07	ENSRNOT00000001218	Nupr2 Links NCBI RGD Ensembl Show fit	nuclear protein 2, transcriptional regulator
chr10_+_103395511 Show fit	0.05	ENSRNOT00000004256	Gprc5c Links NCBI RGD Ensembl Show fit	G protein-coupled receptor, class C, group 5, member C
chr11_-_34142753 Show fit	0.04	ENSRNOT00000002297	Cldn14 Links NCBI RGD Ensembl Show fit	claudin 14
chr13_-_55886679 Show fit	0.03	ENSRNOT00000066601	RGD1566099 Links NCBI RGD Ensembl Show fit	similar to novel protein
chr11_+_71872830 Show fit	0.03	ENSRNOT00000050364	Nrros Links NCBI RGD Ensembl Show fit	negative regulator of reactive oxygen species
chr5_+_135029955 Show fit	0.03	ENSRNOT00000074860	LOC100911669 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100911669
chr15_+_48789165 Show fit	0.02	ENSRNOT00000044562	Zfp395 Links NCBI RGD Ensembl Show fit	zinc finger protein 395
chr8_-_22270647 Show fit	0.02	ENSRNOT00000028380	S1pr5 Links NCBI RGD Ensembl Show fit	sphingosine-1-phosphate receptor 5
chr7_-_144959746 Show fit	0.02	ENSRNOT00000064261	Zfp385a Links NCBI RGD Ensembl Show fit	zinc finger protein 385A
chr1_-_89360733 Show fit	0.02	ENSRNOT00000028544	Mag Links NCBI RGD Ensembl Show fit	myelin-associated glycoprotein
chr7_-_117788550 Show fit	0.02	ENSRNOT00000021775	MGC94207 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA C030006K11
chr12_-_22472044 Show fit	0.02	ENSRNOT00000073356	Ufsp1 Links NCBI RGD Ensembl Show fit	UFM1-specific peptidase 1
chr2_+_200452624 Show fit	0.02	ENSRNOT00000026121	Hmgcs2 Links NCBI RGD Ensembl Show fit	3-hydroxy-3-methylglutaryl-CoA synthase 2
chr9_-_82477136 Show fit	0.02	ENSRNOT00000026753 ENSRNOT00000089555	Resp18 Links NCBI RGD Ensembl Show fit	regulated endocrine-specific protein 18
chr10_+_110139783 Show fit	0.01	ENSRNOT00000054939	Slc16a3 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 3
chr7_-_28932641 Show fit	0.01	ENSRNOT00000059487	Dram1 Links NCBI RGD Ensembl Show fit	DNA-damage regulated autophagy modulator 1
chr6_-_111132320 Show fit	0.01	ENSRNOT00000016057	Ngb Links NCBI RGD Ensembl Show fit	neuroglobin
chrX_-_71168612 Show fit	0.01	ENSRNOT00000075934	Il2rg Links NCBI RGD Ensembl Show fit	interleukin 2 receptor subunit gamma
chr9_+_116652530 Show fit	0.01	ENSRNOT00000029210	L3mbtl4 Links NCBI RGD Ensembl Show fit	l(3)mbt-like 4 (Drosophila)
chr6_+_91697109 Show fit	0.01	ENSRNOT00000006355	Arf6 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor 6
chr4_+_140377565 Show fit	0.01	ENSRNOT00000082723	Itpr1 Links NCBI RGD Ensembl Show fit	inositol 1,4,5-trisphosphate receptor, type 1
chr1_-_220502272 Show fit	0.01	ENSRNOT00000041238	Klc2 Links NCBI RGD Ensembl Show fit	kinesin light chain 2
chr7_+_2458833 Show fit	0.01	ENSRNOT00000085092	Naca Links NCBI RGD Ensembl Show fit	nascent polypeptide-associated complex alpha subunit
chr10_-_14613878 Show fit	0.01	ENSRNOT00000024072	Baiap3 Links NCBI RGD Ensembl Show fit	BAI1-associated protein 3
chr1_+_88324339 Show fit	0.01	ENSRNOT00000072762	LOC102547059 Links NCBI RGD Ensembl Show fit	zinc finger protein 420-like
chr1_-_213907144 Show fit	0.01	ENSRNOT00000054874	Sigirr Links NCBI RGD Ensembl Show fit	single Ig and TIR domain containing
chr5_+_150725654 Show fit	0.01	ENSRNOT00000089852 ENSRNOT00000017740	Dnajc8 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C8
chr10_+_4719713 Show fit	0.01	ENSRNOT00000003412	Litaf Links NCBI RGD Ensembl Show fit	lipopolysaccharide-induced TNF factor
chr8_-_32431987 Show fit	0.01	ENSRNOT00000048460	RGD1563958 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L32
chr1_+_87903783 Show fit	0.01	ENSRNOT00000074299	Zfp84 Links NCBI RGD Ensembl Show fit	zinc finger protein 84
chr5_+_147069616 Show fit	0.01	ENSRNOT00000072908	Trim62 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 62
chr15_+_19690194 Show fit	0.01	ENSRNOT00000010612	Styx Links NCBI RGD Ensembl Show fit	serine/threonine/tyrosine interacting protein
chrX_+_136488691 Show fit	0.01	ENSRNOT00000093432	Arhgap36 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 36
chr4_+_78140483 Show fit	0.01	ENSRNOT00000048576	Zfp862 Links NCBI RGD Ensembl Show fit	zinc finger protein 862
chr6_-_91490366 Show fit	0.01	ENSRNOT00000059187	Dnaaf2 Links NCBI RGD Ensembl Show fit	dynein, axonemal, assembly factor 2
chr5_+_144054452 Show fit	0.01	ENSRNOT00000011565	Mrps15 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein S15
chr7_+_143060597 Show fit	0.01	ENSRNOT00000087481	Krt7 Links NCBI RGD Ensembl Show fit	keratin 7
chr16_-_75309176 Show fit	0.01	ENSRNOT00000018427	Defb1 Links NCBI RGD Ensembl Show fit	defensin beta 1
chr1_+_216254979 Show fit	0.01	ENSRNOT00000046669	Tssc4 Links NCBI RGD Ensembl Show fit	tumor suppressing subtransferable candidate 4
chr11_-_37914983 Show fit	0.01	ENSRNOT00000039876	Mx1 Links NCBI RGD Ensembl Show fit	myxovirus (influenza virus) resistance 1
chr1_-_146226462 Show fit	0.01	ENSRNOT00000036343	Cemip Links NCBI RGD Ensembl Show fit	cell migration-inducing hyaluronan binding protein
chr9_+_94310921 Show fit	0.01	ENSRNOT00000026646	Eif4e2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 2
chr3_+_80081647 Show fit	0.01	ENSRNOT00000057161	Arfgap2 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor GTPase activating protein 2
chr1_+_220840118 Show fit	0.01	ENSRNOT00000027927	Fibp Links NCBI RGD Ensembl Show fit	FGF1 intracellular binding protein
chr10_-_94652658 Show fit	0.01	ENSRNOT00000017371	Ern1 Links NCBI RGD Ensembl Show fit	endoplasmic reticulum to nucleus signaling 1
chr14_+_5928737 Show fit	0.01	ENSRNOT00000071877 ENSRNOT00000040985 ENSRNOT00000074889	Mpa2l Links NCBI RGD Ensembl Show fit	macrophage activation 2 like
chr5_+_60900450 Show fit	0.01	ENSRNOT00000016384	Dcaf10 Links NCBI RGD Ensembl Show fit	DDB1 and CUL4 associated factor 10
chr5_+_169338097 Show fit	0.01	ENSRNOT00000014035	Hes2 Links NCBI RGD Ensembl Show fit	hes family bHLH transcription factor 2
chr13_-_91981432 Show fit	0.01	ENSRNOT00000004637	AABR07021804.1 Links NCBI RGD Ensembl Show fit
chrX_-_20807216 Show fit	0.01	ENSRNOT00000075757	Fam156b Links NCBI RGD Ensembl Show fit	family with sequence similarity 156, member B
chr3_-_37854561 Show fit	0.01	ENSRNOT00000076095	Neb Links NCBI RGD Ensembl Show fit	nebulin
chr3_+_63536166 Show fit	0.01	ENSRNOT00000016132	Plekha3 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A3
chr4_+_168396775 Show fit	0.01	ENSRNOT00000008645	Borcs5 Links NCBI RGD Ensembl Show fit	BLOC-1 related complex subunit 5
chr5_+_135882967 Show fit	0.01	ENSRNOT00000024841	Eif2b3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2B, subunit 3 gamma
chr14_-_86900042 Show fit	0.01	ENSRNOT00000091193	Wap Links NCBI RGD Ensembl Show fit	whey acidic protein
chrX_-_71169038 Show fit	0.01	ENSRNOT00000005343	Il2rg Links NCBI RGD Ensembl Show fit	interleukin 2 receptor subunit gamma
chr10_-_7240812 Show fit	0.01	ENSRNOT00000003700	Mettl22 Links NCBI RGD Ensembl Show fit	methyltransferase like 22
chr7_+_60099120 Show fit	0.01	ENSRNOT00000007338	LOC100911101 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing protein 10-like
chr2_+_235341365 Show fit	0.01	ENSRNOT00000078017 ENSRNOT00000090658	LOC103689977 Links NCBI RGD Ensembl Show fit	caspase-6
chr7_+_60087429 Show fit	0.01	ENSRNOT00000073117	Lrrc10 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing 10
chr2_+_230186198 Show fit	0.01	ENSRNOT00000013049 ENSRNOT00000092954	Casp6 Links NCBI RGD Ensembl Show fit	caspase 6
chr13_+_68949665 Show fit	0.01	ENSRNOT00000003320	Fam129a Links NCBI RGD Ensembl Show fit	family with sequence similarity 129, member A
chr20_+_13680716 Show fit	0.01	ENSRNOT00000029458	LOC103694876 Links NCBI RGD Ensembl Show fit	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
chr2_-_94903226 Show fit	0.01	ENSRNOT00000015194	AABR07009373.1 Links NCBI RGD Ensembl Show fit
chr11_-_87403367 Show fit	0.01	ENSRNOT00000057751	Thap7 Links NCBI RGD Ensembl Show fit	THAP domain containing 7
chrX_-_64726210 Show fit	0.01	ENSRNOT00000076012 ENSRNOT00000086265	Asb12 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 12
chr3_+_159887036 Show fit	0.01	ENSRNOT00000031868	R3hdml Links NCBI RGD Ensembl Show fit	R3H domain containing-like
chr5_+_47894530 Show fit	0.00	ENSRNOT00000076035 ENSRNOT00000090799	Mdn1 Links NCBI RGD Ensembl Show fit	midasin AAA ATPase 1
chr3_-_63535991 Show fit	0.00	ENSRNOT00000015722	Fkbp7 Links NCBI RGD Ensembl Show fit	FK506 binding protein 7
chr1_+_105349069 Show fit	0.00	ENSRNOT00000056030	Nell1 Links NCBI RGD Ensembl Show fit	neural EGFL like 1
chr7_-_132984110 Show fit	0.00	ENSRNOT00000046626	Hmgb1-ps3 Links NCBI RGD Ensembl Show fit	high mobility group box 1, pseudogene 3
chr11_+_60383431 Show fit	0.00	ENSRNOT00000093295	Cd200 Links NCBI RGD Ensembl Show fit	Cd200 molecule
chr3_-_151258580 Show fit	0.00	ENSRNOT00000026120	Edem2 Links NCBI RGD Ensembl Show fit	ER degradation enhancing alpha-mannosidase like protein 2
chr7_+_13996966 Show fit	0.00	ENSRNOT00000009615	Olr1087 Links NCBI RGD Ensembl Show fit	olfactory receptor 1087
chr2_-_188216482 Show fit	0.00	ENSRNOT00000027579	Msto1 Links NCBI RGD Ensembl Show fit	misato 1, mitochondrial distribution and morphology regulator
chr2_-_116374584 Show fit	0.00	ENSRNOT00000058919	Lrriq4 Links NCBI RGD Ensembl Show fit	leucine-rich repeats and IQ motif containing 4
chr20_-_12855891 Show fit	0.00	ENSRNOT00000084053	Lss Links NCBI RGD Ensembl Show fit	lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
chr3_+_176989672 Show fit	0.00	ENSRNOT00000020373	Tpd52l2 Links NCBI RGD Ensembl Show fit	tumor protein D52-like 2
chr14_+_84274550 Show fit	0.00	ENSRNOT00000006053 ENSRNOT00000087383	Sec14l4 Links NCBI RGD Ensembl Show fit	SEC14-like lipid binding 4
chr12_-_2170504 Show fit	0.00	ENSRNOT00000001309	Xab2 Links NCBI RGD Ensembl Show fit	XPA binding protein 2
chr20_+_11863082 Show fit	0.00	ENSRNOT00000001640	Fam207a Links NCBI RGD Ensembl Show fit	family with sequence similarity 207, member A
chr5_+_126334803 Show fit	0.00	ENSRNOT00000010288	Fam151a Links NCBI RGD Ensembl Show fit	family with sequence similarity 151, member A
chr19_-_37952501 Show fit	0.00	ENSRNOT00000026809	Dpep3 Links NCBI RGD Ensembl Show fit	dipeptidase 3
chr12_-_11294058 Show fit	0.00	ENSRNOT00000001319	Arpc1a Links NCBI RGD Ensembl Show fit	actin related protein 2/3 complex, subunit 1A
chr10_-_67401836 Show fit	0.00	ENSRNOT00000073071	Crlf3 Links NCBI RGD Ensembl Show fit	cytokine receptor-like factor 3
chr9_+_84410972 Show fit	0.00	ENSRNOT00000019724	Mogat1 Links NCBI RGD Ensembl Show fit	monoacylglycerol O-acyltransferase 1
chrX_+_112020646 Show fit	0.00	ENSRNOT00000079841	Mid2 Links NCBI RGD Ensembl Show fit	midline 2
chr8_+_85355766 Show fit	0.00	ENSRNOT00000010583	Gcm1 Links NCBI RGD Ensembl Show fit	glial cells missing homolog 1
chr3_+_111825162 Show fit	0.00	ENSRNOT00000066685	Pla2g4b Links NCBI RGD Ensembl Show fit	phospholipase A2 group IVB
chr5_-_173659675 Show fit	0.00	ENSRNOT00000027547	Klhl17 Links NCBI RGD Ensembl Show fit	kelch-like family member 17
chr6_-_132747828 Show fit	0.00	ENSRNOT00000005753	Slc25a29 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 29
chr3_+_2591331 Show fit	0.00	ENSRNOT00000017466	Sapcd2 Links NCBI RGD Ensembl Show fit	suppressor APC domain containing 2
chr12_+_47179664 Show fit	0.00	ENSRNOT00000001551	Cabp1 Links NCBI RGD Ensembl Show fit	calcium binding protein 1
chr8_-_22086095 Show fit	0.00	ENSRNOT00000068598	Zglp1 Links NCBI RGD Ensembl Show fit	zinc finger, GATA-like protein 1
chr12_+_2170630 Show fit	0.00	ENSRNOT00000071928	Pet100 Links NCBI RGD Ensembl Show fit	PET100 homolog
chr1_-_195096460 Show fit	0.00	ENSRNOT00000077253	Snrpn Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide N
chr20_+_41100071 Show fit	0.00	ENSRNOT00000000658	Tspyl4 Links NCBI RGD Ensembl Show fit	TSPY-like 4
chr16_-_81583916 Show fit	0.00	ENSRNOT00000026281	LOC103693999 Links NCBI RGD Ensembl Show fit	transmembrane and coiled-coil domain-containing protein 3
chr19_+_37600148 Show fit	0.00	ENSRNOT00000023853	Ctcf Links NCBI RGD Ensembl Show fit	CCCTC-binding factor
chr3_-_7202848 Show fit	0.00	ENSRNOT00000078428	Gfi1b Links NCBI RGD Ensembl Show fit	growth factor independent 1B transcriptional repressor
chr10_+_14519164 Show fit	0.00	ENSRNOT00000079543 ENSRNOT00000046884	Ccdc154 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 154
chr2_-_200625434 Show fit	0.00	ENSRNOT00000079754	Hsd3b5 Links NCBI RGD Ensembl Show fit	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5
chr9_+_94310469 Show fit	0.00	ENSRNOT00000065743	Eif4e2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 2
chr14_-_14426437 Show fit	0.00	ENSRNOT00000068134	Anxa3 Links NCBI RGD Ensembl Show fit	annexin A3
chr11_-_71419223 Show fit	0.00	ENSRNOT00000002407	Tfrc Links NCBI RGD Ensembl Show fit	transferrin receptor
chr1_-_224533219 Show fit	0.00	ENSRNOT00000051289	Ust5r Links NCBI RGD Ensembl Show fit	integral membrane transport protein UST5r
chr6_-_96442682 Show fit	0.00	ENSRNOT00000010923	Tmem30b Links NCBI RGD Ensembl Show fit	transmembrane protein 30B
chr16_-_20278814 Show fit	0.00	ENSRNOT00000025385	Map1s Links NCBI RGD Ensembl Show fit	microtubule-associated protein 1S
chr1_+_163398891 Show fit	0.00	ENSRNOT00000020513	Gucy2e Links NCBI RGD Ensembl Show fit	guanylate cyclase 2E
chr6_-_138662365 Show fit	0.00	ENSRNOT00000066209 ENSRNOT00000084892	Ighm Links NCBI RGD Ensembl Show fit	immunoglobulin heavy constant mu
chr2_-_200692335 Show fit	0.00	ENSRNOT00000026290	Hsd3b5 Links NCBI RGD Ensembl Show fit	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 5
chr9_-_99818262 Show fit	0.00	ENSRNOT00000056600	Cops9 Links NCBI RGD Ensembl Show fit	COP9 signalosome subunit 9
chrX_+_156429585 Show fit	0.00	ENSRNOT00000083203 ENSRNOT00000077322	Dnase1l1 Links NCBI RGD Ensembl Show fit	deoxyribonuclease 1-like 1
chr3_-_14112851 Show fit	0.00	ENSRNOT00000092736	C5 Links NCBI RGD Ensembl Show fit	complement C5
chr1_-_227505267 Show fit	0.00	ENSRNOT00000028443	Ms4a7 Links NCBI RGD Ensembl Show fit	membrane spanning 4-domains A7
chr14_+_85142279 Show fit	0.00	ENSRNOT00000011281	Thoc5 Links NCBI RGD Ensembl Show fit	THO complex 5
chr1_+_61553449 Show fit	0.00	ENSRNOT00000068694	RGD1565566 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L18a
chr10_-_98390384 Show fit	0.00	ENSRNOT00000065947	Abca8a Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily A (ABC1), member 8a
chr8_-_133002201 Show fit	0.00	ENSRNOT00000008772	Ccr1 Links NCBI RGD Ensembl Show fit	C-C motif chemokine receptor 1
chr1_+_125367280 Show fit	0.00	ENSRNOT00000022049	Apba2 Links NCBI RGD Ensembl Show fit	amyloid beta precursor protein binding family A member 2

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