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GSE53960: rat RNA-Seq transcriptomic Bodymap
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Results for Arnt2
Z-value: 0.13
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Transcription factors associated with Arnt2
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
Arnt2
|
ENSRNOG00000013017 | aryl hydrocarbon receptor nuclear translocator 2 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Arnt2 | rn6_v1_chr1_-_146556171_146556171 | 0.38 | 1.5e-12 | Click! |
Activity profile of Arnt2 motif
Sorted Z-values of Arnt2 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr3_-_39596718 | 6.64 |
ENSRNOT00000006784
|
Rprm
|
reprimo, TP53 dependent G2 arrest mediator candidate |
| chr12_+_24473981 | 1.47 |
ENSRNOT00000001973
|
Fzd9
|
frizzled class receptor 9 |
| chr15_-_46719252 | 0.44 |
ENSRNOT00000015452
|
Mtmr9
|
myotubularin related protein 9 |
| chr1_+_79981355 | 0.22 |
ENSRNOT00000020134
|
Dmwd
|
dystrophia myotonica, WD repeat containing |
| chr9_+_66716969 | 0.16 |
ENSRNOT00000031261
|
Fam117b
|
family with sequence similarity 117, member B |
| chr9_-_16406338 | 0.06 |
ENSRNOT00000073079
|
Tbcc
|
tubulin folding cofactor C |
| chr14_-_85484275 | 0.04 |
ENSRNOT00000083770
|
Kremen1
|
kringle containing transmembrane protein 1 |
| chr2_+_198823366 | 0.02 |
ENSRNOT00000083769
ENSRNOT00000028814 |
Pias3
|
protein inhibitor of activated STAT, 3 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Arnt2
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 1.5 | GO:1990523 | bone regeneration(GO:1990523) |
| 0.0 | 6.6 | GO:0007050 | cell cycle arrest(GO:0007050) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.5 | GO:0031527 | filopodium membrane(GO:0031527) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.5 | GO:0042813 | Wnt-activated receptor activity(GO:0042813) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.5 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 1.5 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |