GSE53960: rat RNA-Seq transcriptomic Bodymap
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Ehf
|
ENSRNOG00000007484 | ets homologous factor |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Ehf | rn6_v1_chr3_-_93216495_93216495 | -0.06 | 2.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_21462779 | 32.76 |
ENSRNOT00000089747
|
Grm3
|
glutamate metabotropic receptor 3 |
chr1_-_70235091 | 22.29 |
ENSRNOT00000075745
|
Apeg3
|
antisense paternally expressed gene 3 |
chr14_+_83752393 | 17.86 |
ENSRNOT00000081123
|
Selenom
|
selenoprotein M |
chr19_+_387374 | 15.99 |
ENSRNOT00000075433
|
LOC102547811
|
uncharacterized LOC102547811 |
chr4_-_16654811 | 15.92 |
ENSRNOT00000008637
|
Pclo
|
piccolo (presynaptic cytomatrix protein) |
chr19_+_209926 | 15.18 |
ENSRNOT00000071393
|
LOC108348293
|
uncharacterized LOC108348293 |
chr19_-_36157924 | 14.40 |
ENSRNOT00000072022
|
AABR07043701.1
|
|
chr1_-_24858316 | 14.39 |
ENSRNOT00000077927
|
AABR07000733.1
|
|
chr2_+_54191538 | 14.27 |
ENSRNOT00000019524
|
Plcxd3
|
phosphatidylinositol-specific phospholipase C, X domain containing 3 |
chr19_-_29134876 | 11.63 |
ENSRNOT00000040545
|
AABR07043523.1
|
|
chr19_-_37427989 | 11.17 |
ENSRNOT00000022863
|
Tppp3
|
tubulin polymerization-promoting protein family member 3 |
chr8_+_117062884 | 7.00 |
ENSRNOT00000082452
ENSRNOT00000071540 |
Nicn1
|
nicolin 1 |
chr4_-_171591882 | 5.34 |
ENSRNOT00000009328
|
Eps8
|
epidermal growth factor receptor pathway substrate 8 |
chr17_+_21521505 | 5.30 |
ENSRNOT00000020672
|
Mak
|
male germ cell-associated kinase |
chr19_+_551708 | 4.64 |
ENSRNOT00000015811
|
Fam96b
|
family with sequence similarity 96, member B |
chr11_+_61661310 | 4.46 |
ENSRNOT00000093325
|
Zdhhc23
|
zinc finger, DHHC-type containing 23 |
chr9_-_50884596 | 3.49 |
ENSRNOT00000016285
|
Kdelc1
|
KDEL motif containing 1 |
chr2_+_196013799 | 2.92 |
ENSRNOT00000084023
|
Pogz
|
pogo transposable element with ZNF domain |
chr1_-_149633029 | 2.83 |
ENSRNOT00000048861
|
LOC100910049
|
olfactory receptor 14A2-like |
chr8_-_116297850 | 2.51 |
ENSRNOT00000031739
ENSRNOT00000082320 |
Cyb561d2
|
cytochrome b561 family, member D2 |
chr10_+_59259955 | 2.12 |
ENSRNOT00000021816
|
Ankfy1
|
ankyrin repeat and FYVE domain containing 1 |
chr18_+_37597156 | 1.92 |
ENSRNOT00000031370
|
Stk32a
|
serine/threonine kinase 32A |
chr10_+_55997614 | 1.77 |
ENSRNOT00000013071
|
Naa38
|
N(alpha)-acetyltransferase 38, NatC auxiliary subunit |
chr3_+_73010786 | 1.59 |
ENSRNOT00000051010
|
Olr447
|
olfactory receptor 447 |
chr4_+_170820594 | 1.07 |
ENSRNOT00000032568
|
LOC500354
|
similar to C030030A07Rik protein |
chr17_+_8558827 | 1.06 |
ENSRNOT00000016187
|
Il9
|
interleukin 9 |
chr8_+_107106982 | 1.02 |
ENSRNOT00000072574
|
LOC684395
|
hypothetical protein LOC684395 |
chr10_+_44407475 | 0.92 |
ENSRNOT00000071556
|
Olr1437
|
olfactory receptor 1437 |
chr3_-_103224624 | 0.77 |
ENSRNOT00000049984
|
Olr785
|
olfactory receptor 785 |
chrX_+_123023280 | 0.71 |
ENSRNOT00000087749
|
Gm6268
|
predicted gene 6268 |
chrX_-_124576133 | 0.70 |
ENSRNOT00000041904
|
Rhox3
|
reproductive homeobox on X chromosome 3 |
chr6_+_69971227 | 0.68 |
ENSRNOT00000075349
|
Foxg1
|
forkhead box G1 |
chr4_-_167089055 | 0.49 |
ENSRNOT00000050409
|
Tas2r113
|
taste receptor, type 2, member 113 |
chr4_+_27509221 | 0.32 |
ENSRNOT00000067954
|
Ankib1
|
ankyrin repeat and IBR domain containing 1 |
chr4_-_167155058 | 0.09 |
ENSRNOT00000047402
|
Tas2r123
|
taste receptor, type 2, member 123 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.0 | 32.8 | GO:0007196 | adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196) |
2.7 | 15.9 | GO:0099526 | synaptic vesicle targeting(GO:0016080) presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526) |
2.2 | 17.9 | GO:0035934 | corticosterone secretion(GO:0035934) |
1.8 | 5.3 | GO:0070358 | actin polymerization-dependent cell motility(GO:0070358) |
1.3 | 5.3 | GO:1902856 | negative regulation of nonmotile primary cilium assembly(GO:1902856) |
0.4 | 2.1 | GO:0048549 | positive regulation of pinocytosis(GO:0048549) |
0.2 | 2.9 | GO:0051382 | kinetochore assembly(GO:0051382) |
0.2 | 4.6 | GO:0031163 | iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163) |
0.1 | 4.5 | GO:0018345 | protein palmitoylation(GO:0018345) |
0.1 | 11.2 | GO:0046785 | microtubule polymerization(GO:0046785) |
0.1 | 0.7 | GO:0016199 | axon midline choice point recognition(GO:0016199) |
0.1 | 1.1 | GO:0032754 | positive regulation of interleukin-5 production(GO:0032754) |
0.0 | 3.5 | GO:0006664 | glycolipid metabolic process(GO:0006664) |
0.0 | 14.3 | GO:0006629 | lipid metabolic process(GO:0006629) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
5.3 | 15.9 | GO:0044317 | rod spherule(GO:0044317) |
1.6 | 32.8 | GO:0097449 | astrocyte projection(GO:0097449) |
0.9 | 4.6 | GO:0097361 | CIA complex(GO:0097361) |
0.4 | 1.8 | GO:0031417 | NatC complex(GO:0031417) |
0.3 | 5.3 | GO:0017146 | NMDA selective glutamate receptor complex(GO:0017146) |
0.2 | 3.1 | GO:0097542 | ciliary tip(GO:0097542) |
0.2 | 2.1 | GO:0044352 | pinosome(GO:0044352) macropinosome(GO:0044354) |
0.0 | 3.5 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.0 | 11.2 | GO:0005874 | microtubule(GO:0005874) |
0.0 | 17.9 | GO:0005794 | Golgi apparatus(GO:0005794) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
10.9 | 32.8 | GO:0001641 | group II metabotropic glutamate receptor activity(GO:0001641) |
0.9 | 15.9 | GO:0005522 | profilin binding(GO:0005522) |
0.2 | 3.5 | GO:0046527 | glucosyltransferase activity(GO:0046527) |
0.1 | 14.3 | GO:0008081 | phosphoric diester hydrolase activity(GO:0008081) |
0.1 | 4.5 | GO:0019706 | protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707) |
0.1 | 5.3 | GO:0048365 | signaling adaptor activity(GO:0035591) Rac GTPase binding(GO:0048365) |
0.0 | 11.2 | GO:0015631 | tubulin binding(GO:0015631) |
0.0 | 5.3 | GO:0003713 | transcription coactivator activity(GO:0003713) |
0.0 | 2.1 | GO:0017137 | Rab GTPase binding(GO:0017137) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.3 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.1 | 5.3 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 32.8 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |