GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Gsx2 Links NCBI RGD Ensembl	ENSRNOG00000002266	GS homeobox 2
Hoxd3 Links NCBI RGD Ensembl	ENSRNOG00000001577	homeo box D3
Vax1 Links NCBI RGD Ensembl	ENSRNOG00000008824	ventral anterior homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hoxd3	rn6_v1_chr3_+_61658245_61658245	0.32	7.6e-09	Click!
Vax1	rn6_v1_chr1_-_280338813_280338813	0.07	1.9e-01	Click!
Gsx2	rn6_v1_chr14_-_35652709_35652709	-0.02	7.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr7_-_76488216 Show fit	29.77	ENSRNOT00000080024	Ncald Links NCBI RGD Ensembl Show fit	neurocalcin delta
chr8_+_33239139 Show fit	27.89	ENSRNOT00000011589	Arhgap32 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 32
chr2_-_158133861 Show fit	26.36	ENSRNOT00000090700	Veph1 Links NCBI RGD Ensembl Show fit	ventricular zone expressed PH domain-containing 1
chr1_+_87224677 Show fit	24.02	ENSRNOT00000028070	Ppp1r14a Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory (inhibitor) subunit 14A
chr17_-_87826421 Show fit	18.94	ENSRNOT00000068156	Arhgap21 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 21
chr5_-_161981441 Show fit	18.02	ENSRNOT00000020316	Pdpn Links NCBI RGD Ensembl Show fit	podoplanin
chr8_-_7426611 Show fit	12.02	ENSRNOT00000031492	Arhgap42 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 42
chr2_-_138833933 Show fit	11.80	ENSRNOT00000013343	Pcdh18 Links NCBI RGD Ensembl Show fit	protocadherin 18
chr2_-_57935334 Show fit	11.52	ENSRNOT00000022319 ENSRNOT00000085599 ENSRNOT00000077790 ENSRNOT00000035821	Slc1a3 Links NCBI RGD Ensembl Show fit	solute carrier family 1 member 3
chr9_+_73418607 Show fit	11.13	ENSRNOT00000092547	Map2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 2
chr12_-_19167015 Show fit	11.13	ENSRNOT00000001797	Gjc3 Links NCBI RGD Ensembl Show fit	gap junction protein, gamma 3
chr18_+_30036887 Show fit	9.96	ENSRNOT00000077824	Pcdha4 Links NCBI RGD Ensembl Show fit	protocadherin alpha 4
chr7_-_101138860 Show fit	9.52	ENSRNOT00000077137	AABR07058124.4 Links NCBI RGD Ensembl Show fit
chr17_+_11683862 Show fit	8.75	ENSRNOT00000024766	Msx2 Links NCBI RGD Ensembl Show fit	msh homeobox 2
chr5_-_168734296 Show fit	8.60	ENSRNOT00000066120	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr1_+_59156251 Show fit	8.59	ENSRNOT00000017442	Lix1 Links NCBI RGD Ensembl Show fit	limb and CNS expressed 1
chr2_-_158156444 Show fit	8.37	ENSRNOT00000088559	Veph1 Links NCBI RGD Ensembl Show fit	ventricular zone expressed PH domain-containing 1
chr2_+_266315036 Show fit	7.89	ENSRNOT00000055245	Wls Links NCBI RGD Ensembl Show fit	wntless Wnt ligand secretion mediator
chr7_-_101138373 Show fit	7.83	ENSRNOT00000043257	LOC500877 Links NCBI RGD Ensembl Show fit	Ab1-152
chr6_+_2216623 Show fit	7.63	ENSRNOT00000008045	Rmdn2 Links NCBI RGD Ensembl Show fit	regulator of microtubule dynamics 2
chrX_+_6273733 Show fit	7.61	ENSRNOT00000074275	Ndp Links NCBI RGD Ensembl Show fit	NDP, norrin cystine knot growth factor
chr18_+_32336102 Show fit	7.43	ENSRNOT00000018577	Fgf1 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 1
chr5_-_17061837 Show fit	7.34	ENSRNOT00000011892	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chr2_-_40386669 Show fit	7.02	ENSRNOT00000014074	Elovl7 Links NCBI RGD Ensembl Show fit	ELOVL fatty acid elongase 7
chr11_-_62067655 Show fit	6.93	ENSRNOT00000093382	Zbtb20 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 20
chr1_+_217345545 Show fit	6.73	ENSRNOT00000071741	Shank2 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 2
chrX_+_14019961 Show fit	6.50	ENSRNOT00000004785	Sytl5 Links NCBI RGD Ensembl Show fit	synaptotagmin-like 5
chr6_+_104291071 Show fit	6.48	ENSRNOT00000006798	Slc39a9 Links NCBI RGD Ensembl Show fit	solute carrier family 39, member 9
chr6_+_8284878 Show fit	6.37	ENSRNOT00000009581	Slc3a1 Links NCBI RGD Ensembl Show fit	solute carrier family 3 member 1
chr2_+_252090669 Show fit	6.34	ENSRNOT00000020656	Lpar3 Links NCBI RGD Ensembl Show fit	lysophosphatidic acid receptor 3
chr18_-_26656879 Show fit	6.20	ENSRNOT00000086729	Epb41l4a Links NCBI RGD Ensembl Show fit	erythrocyte membrane protein band 4.1 like 4A
chr3_-_154627257 Show fit	6.12	ENSRNOT00000018328	Tgm2 Links NCBI RGD Ensembl Show fit	transglutaminase 2
chr2_-_238369692 Show fit	5.93	ENSRNOT00000041583	Arhgef38 Links NCBI RGD Ensembl Show fit	Rho guanine nucleotide exchange factor 38
chr7_-_143497108 Show fit	5.91	ENSRNOT00000048613	Krt76 Links NCBI RGD Ensembl Show fit	keratin 76
chrX_+_84064427 Show fit	5.87	ENSRNOT00000046364	Zfp711 Links NCBI RGD Ensembl Show fit	zinc finger protein 711
chr9_-_44419998 Show fit	5.67	ENSRNOT00000091397 ENSRNOT00000083747	Tsga10 Links NCBI RGD Ensembl Show fit	testis specific 10
chr11_+_36851038 Show fit	5.65	ENSRNOT00000002221 ENSRNOT00000061047	Pcp4 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4
chr2_+_145174876 Show fit	5.63	ENSRNOT00000040631	Mab21l1 Links NCBI RGD Ensembl Show fit	mab-21 like 1
chr5_-_17061361 Show fit	5.58	ENSRNOT00000089318	Penk Links NCBI RGD Ensembl Show fit	proenkephalin
chr17_-_84247038 Show fit	5.52	ENSRNOT00000068553	Nebl Links NCBI RGD Ensembl Show fit	nebulette
chr2_+_158097843 Show fit	5.49	ENSRNOT00000016541	Ptx3 Links NCBI RGD Ensembl Show fit	pentraxin 3
chr2_+_54466280 Show fit	5.31	ENSRNOT00000033112	C6 Links NCBI RGD Ensembl Show fit	complement C6
chr2_+_66940057 Show fit	5.31	ENSRNOT00000043050	Cdh9 Links NCBI RGD Ensembl Show fit	cadherin 9
chr5_+_64476317 Show fit	5.27	ENSRNOT00000017217	LOC108348074 Links NCBI RGD Ensembl Show fit	collagen alpha-1(XV) chain-like
chr9_-_44237117 Show fit	5.23	ENSRNOT00000068496	RGD1310819 Links NCBI RGD Ensembl Show fit	similar to putative protein (5S487)
chr2_-_219262901 Show fit	5.16	ENSRNOT00000037068	Gpr88 Links NCBI RGD Ensembl Show fit	G-protein coupled receptor 88
chr18_+_51523758 Show fit	5.06	ENSRNOT00000078518	Gramd3 Links NCBI RGD Ensembl Show fit	GRAM domain containing 3
chr8_-_78233430 Show fit	5.01	ENSRNOT00000083220	Cgnl1 Links NCBI RGD Ensembl Show fit	cingulin-like 1
chrX_+_65566047 Show fit	4.95	ENSRNOT00000092103	Heph Links NCBI RGD Ensembl Show fit	hephaestin
chr17_-_14627937 Show fit	4.89	ENSRNOT00000020532	NEWGENE_1308171 Links NCBI RGD Ensembl Show fit	osteoglycin
chr2_-_60657712 Show fit	4.87	ENSRNOT00000040348	Rai14 Links NCBI RGD Ensembl Show fit	retinoic acid induced 14
chr6_-_144123596 Show fit	4.65	ENSRNOT00000006144 ENSRNOT00000087845	Wdr60 Links NCBI RGD Ensembl Show fit	WD repeat domain 60
chr6_+_104291340 Show fit	4.64	ENSRNOT00000089313	Slc39a9 Links NCBI RGD Ensembl Show fit	solute carrier family 39, member 9
chr16_-_10802512 Show fit	4.64	ENSRNOT00000079554	Bmpr1a Links NCBI RGD Ensembl Show fit	bone morphogenetic protein receptor type 1A
chr18_-_24735349 Show fit	4.55	ENSRNOT00000036537	Gpr17 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 17
chr3_+_15560712 Show fit	4.54	ENSRNOT00000010218	Ptgs1 Links NCBI RGD Ensembl Show fit	prostaglandin-endoperoxide synthase 1
chr20_+_13817795 Show fit	4.50	ENSRNOT00000036518	Gstt3 Links NCBI RGD Ensembl Show fit	glutathione S-transferase, theta 3
chr1_-_256734719 Show fit	4.47	ENSRNOT00000021546 ENSRNOT00000089456	Myof Links NCBI RGD Ensembl Show fit	myoferlin
chr8_+_44136496 Show fit	4.35	ENSRNOT00000087022	Scn3b Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel beta subunit 3
chr4_+_139670092 Show fit	4.31	ENSRNOT00000008879	Lrrn1 Links NCBI RGD Ensembl Show fit	leucine rich repeat neuronal 1
chr4_-_84740909 Show fit	4.27	ENSRNOT00000013088	Scrn1 Links NCBI RGD Ensembl Show fit	secernin 1
chr4_-_72143748 Show fit	4.20	ENSRNOT00000024428	Tcaf1 Links NCBI RGD Ensembl Show fit	TRPM8 channel-associated factor 1
chr10_+_54156649 Show fit	3.96	ENSRNOT00000074718	Gas7 Links NCBI RGD Ensembl Show fit	growth arrest specific 7
chr1_-_236900904 Show fit	3.95	ENSRNOT00000066846	AABR07006480.1 Links NCBI RGD Ensembl Show fit
chr2_+_202200797 Show fit	3.91	ENSRNOT00000042263 ENSRNOT00000071938	Spag17 Links NCBI RGD Ensembl Show fit	sperm associated antigen 17
chr4_+_158088505 Show fit	3.88	ENSRNOT00000026643	Vwf Links NCBI RGD Ensembl Show fit	von Willebrand factor
chr20_-_30947484 Show fit	3.81	ENSRNOT00000065614	Pald1 Links NCBI RGD Ensembl Show fit	phosphatase domain containing, paladin 1
chr10_-_51778939 Show fit	3.80	ENSRNOT00000078675 ENSRNOT00000057562	Myocd Links NCBI RGD Ensembl Show fit	myocardin
chr12_-_6078411 Show fit	3.80	ENSRNOT00000001197	Rxfp2 Links NCBI RGD Ensembl Show fit	relaxin/insulin-like family peptide receptor 2
chr4_-_100252755 Show fit	3.70	ENSRNOT00000017301	Vamp8 Links NCBI RGD Ensembl Show fit	vesicle-associated membrane protein 8
chr5_-_147412705 Show fit	3.53	ENSRNOT00000010688	RGD1561149 Links NCBI RGD Ensembl Show fit	similar to mKIAA1522 protein
chr18_+_30435119 Show fit	3.53	ENSRNOT00000027190	Pcdhb8 Links NCBI RGD Ensembl Show fit	protocadherin beta 8
chr5_+_18901039 Show fit	3.53	ENSRNOT00000012066	Fam110b Links NCBI RGD Ensembl Show fit	family with sequence similarity 110, member B
chr14_-_82975263 Show fit	3.49	ENSRNOT00000024165	Slc5a1 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 1
chrX_-_69218526 Show fit	3.43	ENSRNOT00000092321 ENSRNOT00000074071 ENSRNOT00000092571	Pja1 Links NCBI RGD Ensembl Show fit	praja ring finger ubiquitin ligase 1
chr1_-_224698514 Show fit	3.42	ENSRNOT00000024234	Slc22a25 Links NCBI RGD Ensembl Show fit	solute carrier family 22, member 25
chr4_-_62860446 Show fit	3.41	ENSRNOT00000015752	Fam180a Links NCBI RGD Ensembl Show fit	family with sequence similarity 180, member A
chr16_-_3765917 Show fit	3.38	ENSRNOT00000088284	Duxbl1 Links NCBI RGD Ensembl Show fit	double homeobox B-like 1
chr3_-_46942966 Show fit	3.28	ENSRNOT00000087439	Rbms1 Links NCBI RGD Ensembl Show fit	RNA binding motif, single stranded interacting protein 1
chr2_+_143656793 Show fit	3.09	ENSRNOT00000084527 ENSRNOT00000017453	Postn Links NCBI RGD Ensembl Show fit	periostin
chr1_-_67065797 Show fit	3.03	ENSRNOT00000048152	Vom1r46 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 46
chr10_-_82117109 Show fit	3.02	ENSRNOT00000079711	Abcc3 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily C member 3
chr3_+_5709236 Show fit	3.00	ENSRNOT00000061201 ENSRNOT00000070887	Dbh Links NCBI RGD Ensembl Show fit	dopamine beta-hydroxylase
chr9_-_85243001 Show fit	2.97	ENSRNOT00000020219	Scg2 Links NCBI RGD Ensembl Show fit	secretogranin II
chr14_-_45859908 Show fit	2.96	ENSRNOT00000086994	Pgm2 Links NCBI RGD Ensembl Show fit	phosphoglucomutase 2
chr3_+_148654668 Show fit	2.95	ENSRNOT00000081370	Tm9sf4 Links NCBI RGD Ensembl Show fit	transmembrane 9 superfamily member 4
chr14_+_39964588 Show fit	2.91	ENSRNOT00000003240	Gabrg1 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor gamma 1 subunit
chr7_+_26256459 Show fit	2.88	ENSRNOT00000010986	Appl2 Links NCBI RGD Ensembl Show fit	adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2
chr1_-_215033460 Show fit	2.81	ENSRNOT00000044565	Dusp8 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 8
chr9_+_67234303 Show fit	2.79	ENSRNOT00000050179	Abi2 Links NCBI RGD Ensembl Show fit	abl-interactor 2
chr2_-_187113717 Show fit	2.75	ENSRNOT00000020147	Lrrc71 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 71
chr2_+_248398917 Show fit	2.71	ENSRNOT00000045855	Gbp1 Links NCBI RGD Ensembl Show fit	guanylate binding protein 1
chr11_+_70056624 Show fit	2.71	ENSRNOT00000002447	AC133403.1 Links NCBI RGD Ensembl Show fit
chr8_-_102149912 Show fit	2.66	ENSRNOT00000011263	RGD1309079 Links NCBI RGD Ensembl Show fit	similar to Ab2-095
chr8_-_33121002 Show fit	2.63	ENSRNOT00000047211	LOC100362981 Links NCBI RGD Ensembl Show fit	LRRGT00010-like
chr1_+_48077033 Show fit	2.62	ENSRNOT00000020100	Mas1 Links NCBI RGD Ensembl Show fit	MAS1 proto-oncogene, G protein-coupled receptor
chr1_+_168575090 Show fit	2.57	ENSRNOT00000048299	Olr103 Links NCBI RGD Ensembl Show fit	olfactory receptor 103
chr11_-_61234944 Show fit	2.52	ENSRNOT00000059680	Cfap44 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 44
chr1_-_101095594 Show fit	2.49	ENSRNOT00000027944	Fcgrt Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor and transporter
chr1_+_99505677 Show fit	2.41	ENSRNOT00000024645	Zfp719 Links NCBI RGD Ensembl Show fit	zinc finger protein 719
chr6_+_95205153 Show fit	2.41	ENSRNOT00000007339	Lrrc9 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 9
chr1_-_23556241 Show fit	2.40	ENSRNOT00000072943	LOC100910446 Links NCBI RGD Ensembl Show fit	syntaxin-7-like
chr12_+_2140203 Show fit	2.37	ENSRNOT00000084906	Camsap3 Links NCBI RGD Ensembl Show fit	calmodulin regulated spectrin-associated protein family, member 3
chr2_-_33025271 Show fit	2.34	ENSRNOT00000074941	NEWGENE_1310139 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase family member 4
chr8_-_84835060 Show fit	2.32	ENSRNOT00000007867	Lrrc1 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 1
chr5_-_133959447 Show fit	2.32	ENSRNOT00000011985	Cyp4x1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 4, subfamily x, polypeptide 1
chr7_-_107203897 Show fit	2.30	ENSRNOT00000086263	Lrrc6 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 6
chr3_+_159368273 Show fit	2.30	ENSRNOT00000041688	Sgk2 Links NCBI RGD Ensembl Show fit	serum/glucocorticoid regulated kinase 2
chr3_-_52664209 Show fit	2.26	ENSRNOT00000065126 ENSRNOT00000079020	Scn9a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 9
chr10_+_103395511 Show fit	2.21	ENSRNOT00000004256	Gprc5c Links NCBI RGD Ensembl Show fit	G protein-coupled receptor, class C, group 5, member C
chr15_+_11298478 Show fit	2.18	ENSRNOT00000007672	Lrrc3b Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 3B
chr6_-_3355339 Show fit	2.14	ENSRNOT00000084602	Map4k3 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 3
chr1_+_80279706 Show fit	2.13	ENSRNOT00000047105	Ppp1r13l Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 13 like
chr4_-_176909075 Show fit	2.12	ENSRNOT00000067489	Abcc9 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily C member 9
chr8_-_17525906 Show fit	2.09	ENSRNOT00000007855	Naalad2 Links NCBI RGD Ensembl Show fit	N-acetylated alpha-linked acidic dipeptidase 2
chr7_+_6644643 Show fit	2.07	ENSRNOT00000051670	Olr962 Links NCBI RGD Ensembl Show fit	olfactory receptor 962
chr4_+_87608301 Show fit	1.98	ENSRNOT00000058702	Vom1r71 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 71
chr13_+_60619309 Show fit	1.97	ENSRNOT00000082129	AABR07021204.1 Links NCBI RGD Ensembl Show fit
chr13_+_82355886 Show fit	1.97	ENSRNOT00000076757	Sele Links NCBI RGD Ensembl Show fit	selectin E
chr2_-_96509424 Show fit	1.95	ENSRNOT00000090866	Zc2hc1a Links NCBI RGD Ensembl Show fit	zinc finger, C2HC-type containing 1A
chr1_-_72184265 Show fit	1.90	ENSRNOT00000047856	Vom1r36 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 36
chr14_-_77810147 Show fit	1.88	ENSRNOT00000035427	Cytl1 Links NCBI RGD Ensembl Show fit	cytokine like 1
chr10_+_104582955 Show fit	1.87	ENSRNOT00000009733	Unk Links NCBI RGD Ensembl Show fit	unkempt family zinc finger
chr15_+_108526014 Show fit	1.87	ENSRNOT00000017211	Tm9sf2 Links NCBI RGD Ensembl Show fit	transmembrane 9 superfamily member 2
chr13_+_82355471 Show fit	1.85	ENSRNOT00000030677	Sele Links NCBI RGD Ensembl Show fit	selectin E
chr2_-_181900856 Show fit	1.84	ENSRNOT00000082156	Lrat Links NCBI RGD Ensembl Show fit	lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
chr18_+_17043903 Show fit	1.84	ENSRNOT00000068139	Fhod3 Links NCBI RGD Ensembl Show fit	formin homology 2 domain containing 3
chr7_+_72924799 Show fit	1.83	ENSRNOT00000008969	Laptm4b Links NCBI RGD Ensembl Show fit	lysosomal protein transmembrane 4 beta
chr14_+_34446616 Show fit	1.82	ENSRNOT00000002976	Clock Links NCBI RGD Ensembl Show fit	clock circadian regulator
chr4_-_55011415 Show fit	1.67	ENSRNOT00000056996	Grm8 Links NCBI RGD Ensembl Show fit	glutamate metabotropic receptor 8
chr3_-_14643897 Show fit	1.63	ENSRNOT00000082008 ENSRNOT00000025983	Ggta1 Links NCBI RGD Ensembl Show fit	glycoprotein, alpha-galactosyltransferase 1
chr1_-_275882444 Show fit	1.63	ENSRNOT00000083215	Gpam Links NCBI RGD Ensembl Show fit	glycerol-3-phosphate acyltransferase, mitochondrial
chr20_+_3230052 Show fit	1.57	ENSRNOT00000078454	RT1-T24-3 Links NCBI RGD Ensembl Show fit	RT1 class I, locus T24, gene 3
chr2_-_25235275 Show fit	1.56	ENSRNOT00000061580	F2rl1 Links NCBI RGD Ensembl Show fit	F2R like trypsin receptor 1
chr12_+_17253791 Show fit	1.54	ENSRNOT00000083814	Zfand2a Links NCBI RGD Ensembl Show fit	zinc finger AN1-type containing 2A
chr12_-_52658275 Show fit	1.54	ENSRNOT00000041981	Zfp605 Links NCBI RGD Ensembl Show fit	zinc finger protein 605
chr6_+_29977797 Show fit	1.51	ENSRNOT00000071784	Fkbp1b Links NCBI RGD Ensembl Show fit	FK506 binding protein 1B
chr15_+_45712821 Show fit	1.49	ENSRNOT00000083381 ENSRNOT00000045833	Fam124a Links NCBI RGD Ensembl Show fit	family with sequence similarity 124 member A
chr8_+_59344083 Show fit	1.46	ENSRNOT00000031175	Crabp1 Links NCBI RGD Ensembl Show fit	cellular retinoic acid binding protein 1
chr7_+_71157664 Show fit	1.41	ENSRNOT00000005919	Sdr9c7 Links NCBI RGD Ensembl Show fit	short chain dehydrogenase/reductase family 9C, member 7
chr14_-_5101177 Show fit	1.38	ENSRNOT00000002888	Lrrc8d Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 8 family, member D
chr3_-_3594475 Show fit	1.35	ENSRNOT00000064861	RGD1564379 Links NCBI RGD Ensembl Show fit	RGD1564379
chr7_-_14364178 Show fit	1.34	ENSRNOT00000090673	Akap8l Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 8 like
chr2_-_93985378 Show fit	1.33	ENSRNOT00000075493	Fabp5 Links NCBI RGD Ensembl Show fit	fatty acid binding protein 5, epidermal
chr20_+_3246739 Show fit	1.33	ENSRNOT00000061299	RT1-T24-2 Links NCBI RGD Ensembl Show fit	RT1 class I, locus T24, gene 2
chr3_-_111087347 Show fit	1.33	ENSRNOT00000018277	Rhov Links NCBI RGD Ensembl Show fit	ras homolog family member V
chrX_-_152642531 Show fit	1.29	ENSRNOT00000085037	Gabra3 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor alpha3 subunit
chr10_+_86399827 Show fit	1.29	ENSRNOT00000009299	Grb7 Links NCBI RGD Ensembl Show fit	growth factor receptor bound protein 7
chr9_+_84203072 Show fit	1.20	ENSRNOT00000018882	Sgpp2 Links NCBI RGD Ensembl Show fit	sphingosine-1-phosphate phosphatase 2
chr3_+_117421604 Show fit	1.18	ENSRNOT00000008860 ENSRNOT00000008857	Slc12a1 Links NCBI RGD Ensembl Show fit	solute carrier family 12 member 1
chr10_+_64174931 Show fit	1.17	ENSRNOT00000035948	RGD1565611 Links NCBI RGD Ensembl Show fit	RGD1565611
chr5_+_129756149 Show fit	1.13	ENSRNOT00000067277	Dmrta2 Links NCBI RGD Ensembl Show fit	DMRT-like family A2
chr1_+_86429262 Show fit	1.12	ENSRNOT00000045789	Vom1r3 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 3
chr2_+_243577082 Show fit	1.12	ENSRNOT00000016556	Adh6a Links NCBI RGD Ensembl Show fit	alcohol dehydrogenase 6A (class V)
chr12_+_19328957 Show fit	1.10	ENSRNOT00000033288	Cnpy4 Links NCBI RGD Ensembl Show fit	canopy FGF signaling regulator 4
chr1_+_75298364 Show fit	1.05	ENSRNOT00000018981	Vom1r61 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 61
chr1_+_170205591 Show fit	1.05	ENSRNOT00000071063	LOC686660 Links NCBI RGD Ensembl Show fit	similar to olfactory receptor 692
chr4_-_88684415 Show fit	1.03	ENSRNOT00000009001	LOC500148 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S7 (S8)
chr8_+_41302631 Show fit	1.02	ENSRNOT00000076963	LOC100910822 Links NCBI RGD Ensembl Show fit	olfactory receptor 143-like
chr3_-_160561741 Show fit	1.00	ENSRNOT00000018364	Kcns1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel, modifier subfamily S, member 1
chr3_-_76102782 Show fit	0.98	ENSRNOT00000007690	Olr602 Links NCBI RGD Ensembl Show fit	olfactory receptor 602
chr10_-_47546037 Show fit	0.96	ENSRNOT00000066109	Aldh3a2 Links NCBI RGD Ensembl Show fit	aldehyde dehydrogenase 3 family, member A2
chr1_+_277355619 Show fit	0.96	ENSRNOT00000022788	Nhlrc2 Links NCBI RGD Ensembl Show fit	NHL repeat containing 2
chr15_-_54528480 Show fit	0.93	ENSRNOT00000066888	Fndc3a Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 3a
chrX_+_68627313 Show fit	0.89	ENSRNOT00000076699 ENSRNOT00000076795 ENSRNOT00000008705	Yipf6 Links NCBI RGD Ensembl Show fit	Yip1 domain family, member 6
chr6_-_104290579 Show fit	0.88	ENSRNOT00000066014	Erh Links NCBI RGD Ensembl Show fit	enhancer of rudimentary homolog (Drosophila)
chr5_+_58995249 Show fit	0.88	ENSRNOT00000023411	Ccdc107 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 107
chr14_-_82658891 Show fit	0.87	ENSRNOT00000006841	Uvssa Links NCBI RGD Ensembl Show fit	UV-stimulated scaffold protein A
chr4_+_6827429 Show fit	0.87	ENSRNOT00000071737	Rheb Links NCBI RGD Ensembl Show fit	Ras homolog enriched in brain
chr13_-_89545182 Show fit	0.86	ENSRNOT00000078402	Pcp4l1 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4-like 1
chrM_+_9870 Show fit	0.83	ENSRNOT00000044582	Mt-nd4l Links NCBI RGD Ensembl Show fit	mitochondrially encoded NADH 4L dehydrogenase
chr17_-_54678710 Show fit	0.83	ENSRNOT00000046013	Zeb1 Links NCBI RGD Ensembl Show fit	zinc finger E-box binding homeobox 1
chr1_-_190370499 Show fit	0.80	ENSRNOT00000084389	AABR07005618.1 Links NCBI RGD Ensembl Show fit
chr6_-_127319362 Show fit	0.80	ENSRNOT00000012256	Ddx24 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 24
chr7_-_55604403 Show fit	0.79	ENSRNOT00000088732	Atxn7l3b Links NCBI RGD Ensembl Show fit	ataxin 7-like 3B
chr17_+_45801528 Show fit	0.78	ENSRNOT00000089221	Olr1664 Links NCBI RGD Ensembl Show fit	olfactory receptor 1664
chr15_-_93765498 Show fit	0.76	ENSRNOT00000093297	Mycbp2 Links NCBI RGD Ensembl Show fit	MYC binding protein 2, E3 ubiquitin protein ligase
chr10_-_47546345 Show fit	0.72	ENSRNOT00000077461	Aldh3a2 Links NCBI RGD Ensembl Show fit	aldehyde dehydrogenase 3 family, member A2
chr10_-_52290657 Show fit	0.71	ENSRNOT00000005293	Map2k4 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase 4
chr7_-_3229167 Show fit	0.69	ENSRNOT00000008929	Tmem198b Links NCBI RGD Ensembl Show fit	transmembrane protein 198b
chr14_-_24123253 Show fit	0.67	ENSRNOT00000002743	Tmprss11b Links NCBI RGD Ensembl Show fit	transmembrane protease, serine 11B
chr4_-_51199570 Show fit	0.64	ENSRNOT00000010788	Slc13a1 Links NCBI RGD Ensembl Show fit	solute carrier family 13 member 1
chr2_+_85305225 Show fit	0.64	ENSRNOT00000015904	Tas2r119 Links NCBI RGD Ensembl Show fit	taste receptor, type 2, member 119
chr3_-_114251647 Show fit	0.63	ENSRNOT00000024245	Duoxa1 Links NCBI RGD Ensembl Show fit	dual oxidase maturation factor 1
chrX_+_37329779 Show fit	0.61	ENSRNOT00000038352 ENSRNOT00000088802	Pdha1 Links NCBI RGD Ensembl Show fit	pyruvate dehydrogenase (lipoamide) alpha 1
chr5_-_28164326 Show fit	0.60	ENSRNOT00000088165	Slc26a7 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 7
chr8_+_18795525 Show fit	0.60	ENSRNOT00000050430	Olr1124 Links NCBI RGD Ensembl Show fit	olfactory receptor 1124
chr3_+_102947730 Show fit	0.58	ENSRNOT00000071260	Olr773 Links NCBI RGD Ensembl Show fit	olfactory receptor 773
chr9_+_10013854 Show fit	0.57	ENSRNOT00000077653 ENSRNOT00000072033	Khsrp Links NCBI RGD Ensembl Show fit	KH-type splicing regulatory protein
chr14_-_6533524 Show fit	0.56	ENSRNOT00000079795	Abcg3l1 Links NCBI RGD Ensembl Show fit	ATP-binding cassette, subfamily G (WHITE), member 3-like 1
chr14_+_70164650 Show fit	0.55	ENSRNOT00000004385	Qdpr Links NCBI RGD Ensembl Show fit	quinoid dihydropteridine reductase
chr2_+_187951344 Show fit	0.54	ENSRNOT00000027123	Ssr2 Links NCBI RGD Ensembl Show fit	signal sequence receptor, beta
chr9_+_95295701 Show fit	0.54	ENSRNOT00000025045	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr12_-_37538403 Show fit	0.53	ENSRNOT00000001402	Snrnp35 Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein U11/U12 subunit 35
chr8_+_41336340 Show fit	0.52	ENSRNOT00000072049	Olr1225 Links NCBI RGD Ensembl Show fit	olfactory receptor 1225
chr3_+_72134731 Show fit	0.51	ENSRNOT00000083592	Ypel4 Links NCBI RGD Ensembl Show fit	yippee-like 4
chr7_-_15821927 Show fit	0.49	ENSRNOT00000050658	LOC691422 Links NCBI RGD Ensembl Show fit	similar to zinc finger protein 101
chr5_+_142986526 Show fit	0.49	ENSRNOT00000012811	Rspo1 Links NCBI RGD Ensembl Show fit	R-spondin 1
chr18_-_16543992 Show fit	0.46	ENSRNOT00000036306	Slc39a6 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 6
chr9_+_15513063 Show fit	0.44	ENSRNOT00000020499	Taf8 Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 8

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.7	18.9	GO:0051684	maintenance of Golgi location(GO:0051684)
4.3	12.9	GO:0051867	general adaptation syndrome, behavioral process(GO:0051867)
4.0	12.0	GO:1904694	negative regulation of vascular smooth muscle contraction(GO:1904694)
2.9	8.8	GO:2001055	embryonic nail plate morphogenesis(GO:0035880) positive regulation of mesenchymal cell apoptotic process(GO:2001055)
2.9	11.5	GO:0043490	malate-aspartate shuttle(GO:0043490)
2.6	7.9	GO:0061357	positive regulation of Wnt protein secretion(GO:0061357)
2.3	18.0	GO:0015884	folic acid transport(GO:0015884)
2.0	6.1	GO:0018199	peptidyl-glutamine modification(GO:0018199)
1.8	5.5	GO:0071691	cardiac muscle thin filament assembly(GO:0071691)
1.8	5.3	GO:0001905	activation of membrane attack complex(GO:0001905) regulation of activation of membrane attack complex(GO:0001969)
1.5	4.6	GO:0048372	lateral mesodermal cell fate commitment(GO:0048372) lateral mesodermal cell fate specification(GO:0048377) regulation of lateral mesodermal cell fate specification(GO:0048378) regulation of cardiac ventricle development(GO:1904412)
1.5	7.4	GO:1901509	regulation of endothelial tube morphogenesis(GO:1901509)
1.4	5.6	GO:1904009	cellular response to monosodium glutamate(GO:1904009)
1.4	7.0	GO:0034626	fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
1.4	5.5	GO:0052422	modulation of catalytic activity in other organism involved in symbiotic interaction(GO:0052203) modulation by host of symbiont catalytic activity(GO:0052422) regulation of exo-alpha-sialidase activity(GO:1903015)
1.3	7.6	GO:0035426	extracellular matrix-cell signaling(GO:0035426)
1.3	3.8	GO:1900222	regulation of cell growth by extracellular stimulus(GO:0001560) negative regulation of beta-amyloid clearance(GO:1900222) positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721)
1.2	3.7	GO:1903595	pancreatic amylase secretion(GO:0036395) regulation of pancreatic amylase secretion(GO:1902276) positive regulation of histamine secretion by mast cell(GO:1903595)
1.2	4.6	GO:0035926	chemokine (C-C motif) ligand 2 secretion(GO:0035926)
1.0	5.2	GO:0061743	motor learning(GO:0061743)
1.0	3.0	GO:0006589	octopamine biosynthetic process(GO:0006589) octopamine metabolic process(GO:0046333)
1.0	3.9	GO:1904158	axonemal central apparatus assembly(GO:1904158)
0.9	4.5	GO:0019371	cyclooxygenase pathway(GO:0019371)
0.7	3.5	GO:0001951	intestinal D-glucose absorption(GO:0001951)
0.7	2.7	GO:1900041	negative regulation of interleukin-2 secretion(GO:1900041)
0.6	4.3	GO:0060373	regulation of ventricular cardiac muscle cell membrane depolarization(GO:0060373)
0.6	4.2	GO:1901529	positive regulation of anion channel activity(GO:1901529)
0.6	2.3	GO:0043179	rhythmic excitation(GO:0043179)
0.6	1.7	GO:0033306	phytol metabolic process(GO:0033306) fatty alcohol metabolic process(GO:1903173)
0.5	1.6	GO:0042125	protein glycosylation at cell surface(GO:0033575) protein galactosylation at cell surface(GO:0033580) protein galactosylation(GO:0042125)
0.5	2.1	GO:0060327	cytoplasmic actin-based contraction involved in cell motility(GO:0060327)
0.5	6.7	GO:0099562	maintenance of postsynaptic specialization structure(GO:0098880) maintenance of postsynaptic density structure(GO:0099562)
0.5	3.0	GO:0042908	xenobiotic transport(GO:0042908)
0.5	2.4	GO:0045218	zonula adherens maintenance(GO:0045218)
0.4	3.9	GO:0070417	cellular response to cold(GO:0070417)
0.4	2.8	GO:2000601	positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.4	5.9	GO:0048733	sebaceous gland development(GO:0048733)
0.4	1.2	GO:0032978	protein insertion into membrane from inner side(GO:0032978)
0.4	1.2	GO:0016598	protein arginylation(GO:0016598)
0.4	2.7	GO:2000074	regulation of type B pancreatic cell development(GO:2000074)
0.4	11.6	GO:0006829	zinc II ion transport(GO:0006829)
0.4	4.5	GO:0001778	plasma membrane repair(GO:0001778)
0.4	1.5	GO:0016103	diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653)
0.4	6.3	GO:0032060	bleb assembly(GO:0032060)
0.3	3.4	GO:0070317	negative regulation of G0 to G1 transition(GO:0070317)
0.3	2.3	GO:0060287	epithelial cilium movement involved in determination of left/right asymmetry(GO:0060287)
0.3	3.4	GO:0015747	urate transport(GO:0015747)
0.3	8.6	GO:0097352	autophagosome maturation(GO:0097352)
0.3	11.1	GO:0007026	negative regulation of microtubule depolymerization(GO:0007026)
0.3	29.8	GO:0003073	regulation of systemic arterial blood pressure(GO:0003073)
0.3	1.5	GO:0051775	response to redox state(GO:0051775)
0.2	3.0	GO:0070863	positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.2	2.6	GO:0060732	positive regulation of inositol phosphate biosynthetic process(GO:0060732)
0.2	1.8	GO:0006776	vitamin A metabolic process(GO:0006776)
0.2	4.5	GO:0002862	negative regulation of inflammatory response to antigenic stimulus(GO:0002862)
0.2	1.9	GO:2000766	negative regulation of cytoplasmic translation(GO:2000766)
0.2	24.6	GO:0035690	cellular response to drug(GO:0035690)
0.2	30.6	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156)
0.2	0.6	GO:0061732	mitochondrial acetyl-CoA biosynthetic process from pyruvate(GO:0061732)
0.2	3.0	GO:0048245	eosinophil chemotaxis(GO:0048245)
0.2	1.3	GO:0051081	membrane disassembly(GO:0030397) nuclear envelope disassembly(GO:0051081)
0.2	1.6	GO:0016024	CDP-diacylglycerol biosynthetic process(GO:0016024)
0.2	0.7	GO:0072709	cellular response to sorbitol(GO:0072709)
0.2	1.7	GO:0007196	adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
0.2	2.5	GO:0038094	Fc-gamma receptor signaling pathway(GO:0038094)
0.2	3.8	GO:0006825	copper ion transport(GO:0006825)
0.2	2.1	GO:0042135	neurotransmitter catabolic process(GO:0042135)
0.2	4.7	GO:0032728	positive regulation of interferon-beta production(GO:0032728)
0.2	2.1	GO:0000185	activation of MAPKKK activity(GO:0000185)
0.1	1.2	GO:0006670	sphingosine metabolic process(GO:0006670)
0.1	3.8	GO:0050901	leukocyte tethering or rolling(GO:0050901)
0.1	3.8	GO:0001556	oocyte maturation(GO:0001556)
0.1	2.5	GO:0060285	cilium or flagellum-dependent cell motility(GO:0001539) cilium-dependent cell motility(GO:0060285)
0.1	1.8	GO:0051639	actin filament network formation(GO:0051639)
0.1	6.5	GO:0048791	calcium ion-regulated exocytosis of neurotransmitter(GO:0048791)
0.1	8.6	GO:0050885	neuromuscular process controlling balance(GO:0050885)
0.1	1.1	GO:0021796	cerebral cortex regionalization(GO:0021796)
0.1	1.3	GO:0034063	stress granule assembly(GO:0034063)
0.1	2.1	GO:0003215	cardiac right ventricle morphogenesis(GO:0003215)
0.1	0.6	GO:2000609	regulation of thyroid hormone generation(GO:2000609)
0.1	2.8	GO:0000188	inactivation of MAPK activity(GO:0000188)
0.1	0.8	GO:0048752	semicircular canal morphogenesis(GO:0048752)
0.1	4.2	GO:0007214	gamma-aminobutyric acid signaling pathway(GO:0007214)
0.1	0.3	GO:1904742	protein poly-ADP-ribosylation(GO:0070212) regulation of telomeric DNA binding(GO:1904742)
0.1	1.9	GO:0050650	chondroitin sulfate proteoglycan biosynthetic process(GO:0050650)
0.1	0.9	GO:0006283	transcription-coupled nucleotide-excision repair(GO:0006283)
0.1	0.6	GO:2000628	regulation of miRNA metabolic process(GO:2000628)
0.1	1.5	GO:0071243	cellular response to arsenic-containing substance(GO:0071243)
0.1	11.1	GO:0042552	myelination(GO:0042552)
0.1	1.2	GO:1902358	sulfate transmembrane transport(GO:1902358)
0.1	0.4	GO:0034227	tRNA thio-modification(GO:0034227)
0.1	2.7	GO:0060038	cardiac muscle cell proliferation(GO:0060038)
0.1	1.3	GO:0006656	phosphatidylcholine biosynthetic process(GO:0006656)
0.1	0.5	GO:2000254	regulation of male germ cell proliferation(GO:2000254)
0.1	4.3	GO:0051965	positive regulation of synapse assembly(GO:0051965)
0.1	0.5	GO:0052697	xenobiotic glucuronidation(GO:0052697)
0.1	0.9	GO:0060576	intestinal epithelial cell development(GO:0060576)
0.1	1.0	GO:1902259	regulation of delayed rectifier potassium channel activity(GO:1902259)
0.1	0.8	GO:0021785	branchiomotor neuron axon guidance(GO:0021785)
0.1	4.7	GO:0048704	embryonic skeletal system morphogenesis(GO:0048704)
0.1	2.3	GO:0048662	negative regulation of smooth muscle cell proliferation(GO:0048662)
0.0	0.4	GO:0006751	glutathione catabolic process(GO:0006751)
0.0	22.9	GO:0007264	small GTPase mediated signal transduction(GO:0007264)
0.0	3.8	GO:0035335	peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0	0.6	GO:0006855	drug transmembrane transport(GO:0006855)
0.0	5.9	GO:0006865	amino acid transport(GO:0006865)
0.0	0.9	GO:0060009	Sertoli cell development(GO:0060009)
0.0	0.3	GO:0090042	tubulin deacetylation(GO:0090042) regulation of tubulin deacetylation(GO:0090043)
0.0	4.0	GO:0008360	regulation of cell shape(GO:0008360)
0.0	0.5	GO:0006613	cotranslational protein targeting to membrane(GO:0006613)
0.0	0.2	GO:1901621	negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning(GO:1901621)
0.0	1.9	GO:0048278	vesicle docking(GO:0048278)
0.0	2.5	GO:0050909	sensory perception of taste(GO:0050909)
0.0	0.4	GO:0051457	maintenance of protein location in nucleus(GO:0051457)
0.0	2.3	GO:0032411	positive regulation of transporter activity(GO:0032411)
0.0	0.9	GO:0045747	positive regulation of Notch signaling pathway(GO:0045747)
0.0	0.4	GO:0031468	nuclear envelope reassembly(GO:0031468)
0.0	0.8	GO:0010501	RNA secondary structure unwinding(GO:0010501)
0.0	0.7	GO:0002474	antigen processing and presentation of peptide antigen via MHC class I(GO:0002474)
0.0	0.1	GO:0043922	negative regulation by host of viral transcription(GO:0043922)
0.0	3.0	GO:0006006	glucose metabolic process(GO:0006006)
0.0	1.0	GO:0045454	cell redox homeostasis(GO:0045454)
0.0	0.2	GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase(GO:0033539)
0.0	0.2	GO:0043248	proteasome assembly(GO:0043248)
0.0	3.2	GO:0030031	cell projection assembly(GO:0030031)
0.0	0.1	GO:0008063	Toll signaling pathway(GO:0008063)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.2	12.9	GO:0032280	symmetric synapse(GO:0032280)
1.2	11.1	GO:0097442	CA3 pyramidal cell dendrite(GO:0097442)
1.2	3.7	GO:0035577	azurophil granule membrane(GO:0035577)
1.2	4.7	GO:0031021	interphase microtubule organizing center(GO:0031021)
1.0	17.4	GO:0031258	lamellipodium membrane(GO:0031258)
0.8	3.9	GO:1990716	axonemal central apparatus(GO:1990716)
0.8	12.4	GO:0005883	neurofilament(GO:0005883)
0.8	5.3	GO:0005579	membrane attack complex(GO:0005579)
0.7	3.0	GO:0034774	secretory granule lumen(GO:0034774)
0.7	2.7	GO:0020005	symbiont-containing vacuole membrane(GO:0020005)
0.6	3.9	GO:0033093	Weibel-Palade body(GO:0033093)
0.5	2.1	GO:0008282	ATP-sensitive potassium channel complex(GO:0008282)
0.5	11.1	GO:0005922	connexon complex(GO:0005922)
0.3	2.4	GO:0036449	microtubule minus-end(GO:0036449)
0.3	6.6	GO:0001518	voltage-gated sodium channel complex(GO:0001518)
0.3	2.3	GO:0031209	SCAR complex(GO:0031209)
0.3	8.6	GO:0032839	dendrite cytoplasm(GO:0032839)
0.2	1.7	GO:0042406	extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2	32.8	GO:0001650	fibrillar center(GO:0001650)
0.2	0.6	GO:0005967	mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2	3.0	GO:0031045	dense core granule(GO:0031045)
0.2	2.7	GO:0030126	COPI vesicle coat(GO:0030126)
0.1	1.6	GO:0031143	pseudopodium(GO:0031143)
0.1	2.9	GO:0090545	NuRD complex(GO:0016581) CHD-type complex(GO:0090545)
0.1	9.9	GO:0031526	brush border membrane(GO:0031526)
0.1	0.4	GO:1990730	VCP-NSFL1C complex(GO:1990730)
0.1	12.9	GO:0005901	caveola(GO:0005901)
0.1	1.8	GO:0033391	chromatoid body(GO:0033391)
0.1	5.1	GO:0005881	cytoplasmic microtubule(GO:0005881)
0.1	0.5	GO:0000243	commitment complex(GO:0000243)
0.1	4.2	GO:0034707	chloride channel complex(GO:0034707)
0.1	1.8	GO:0005865	striated muscle thin filament(GO:0005865)
0.1	4.9	GO:0001725	stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517)
0.1	5.0	GO:0016459	myosin complex(GO:0016459)
0.1	0.9	GO:0034709	methylosome(GO:0034709)
0.1	4.8	GO:0005581	collagen trimer(GO:0005581)
0.1	4.5	GO:0001750	photoreceptor outer segment(GO:0001750)
0.1	14.2	GO:0016323	basolateral plasma membrane(GO:0016323)
0.1	2.3	GO:0045171	intercellular bridge(GO:0045171)
0.1	29.1	GO:0031012	extracellular matrix(GO:0031012)
0.1	1.8	GO:0005771	multivesicular body(GO:0005771)
0.1	19.4	GO:0015629	actin cytoskeleton(GO:0015629)
0.1	0.3	GO:0000125	PCAF complex(GO:0000125)
0.1	2.4	GO:0031201	SNARE complex(GO:0031201)
0.0	1.5	GO:0033017	sarcoplasmic reticulum membrane(GO:0033017)
0.0	13.5	GO:0031965	nuclear membrane(GO:0031965)
0.0	0.2	GO:0033588	Elongator holoenzyme complex(GO:0033588)
0.0	1.9	GO:0005844	polysome(GO:0005844)
0.0	1.9	GO:0010494	cytoplasmic stress granule(GO:0010494)
0.0	6.3	GO:0070382	exocytic vesicle(GO:0070382)
0.0	1.7	GO:0042734	presynaptic membrane(GO:0042734)
0.0	22.3	GO:0005887	integral component of plasma membrane(GO:0005887)
0.0	0.9	GO:0030134	ER to Golgi transport vesicle(GO:0030134)
0.0	7.1	GO:0030424	axon(GO:0030424)
0.0	7.0	GO:0016607	nuclear speck(GO:0016607)
0.0	0.2	GO:0032588	trans-Golgi network membrane(GO:0032588)
0.0	1.6	GO:0005741	mitochondrial outer membrane(GO:0005741) organelle outer membrane(GO:0031968)
0.0	2.9	GO:0005769	early endosome(GO:0005769)
0.0	4.2	GO:0005874	microtubule(GO:0005874)
0.0	1.1	GO:0000502	proteasome complex(GO:0000502)
0.0	9.1	GO:0005789	endoplasmic reticulum membrane(GO:0005789)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.3	11.5	GO:0005314	high-affinity glutamate transmembrane transporter activity(GO:0005314)
2.3	18.0	GO:0008517	folic acid transporter activity(GO:0008517)
2.2	12.9	GO:0001515	opioid peptide activity(GO:0001515)
1.4	5.6	GO:0070915	lysophosphatidic acid receptor activity(GO:0070915)
1.1	29.8	GO:0043014	alpha-tubulin binding(GO:0043014)
1.1	7.9	GO:0031852	mu-type opioid receptor binding(GO:0031852)
1.0	3.0	GO:0004500	dopamine beta-monooxygenase activity(GO:0004500)
0.8	5.0	GO:0004322	ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.8	24.0	GO:0004864	protein phosphatase inhibitor activity(GO:0004864)
0.8	5.5	GO:0001849	complement component C1q binding(GO:0001849)
0.8	4.6	GO:0098821	BMP receptor activity(GO:0098821)
0.7	2.1	GO:0008281	sulfonylurea receptor activity(GO:0008281)
0.7	7.0	GO:0102338	fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.7	2.7	GO:0019002	GMP binding(GO:0019002)
0.7	4.7	GO:0045503	dynein light chain binding(GO:0045503)
0.6	6.1	GO:0003810	protein-glutamine gamma-glutamyltransferase activity(GO:0003810)
0.6	3.0	GO:0004614	phosphoglucomutase activity(GO:0004614)
0.5	4.3	GO:0086006	voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.5	6.7	GO:0098879	structural constituent of postsynaptic specialization(GO:0098879) structural constituent of postsynaptic density(GO:0098919)
0.5	2.5	GO:0019770	IgG receptor activity(GO:0019770)
0.5	11.1	GO:0002162	dystroglycan binding(GO:0002162)
0.4	1.7	GO:0001642	group III metabotropic glutamate receptor activity(GO:0001642)
0.4	7.4	GO:0044548	S100 protein binding(GO:0044548)
0.4	1.6	GO:0047276	N-acetyllactosaminide 3-alpha-galactosyltransferase activity(GO:0047276)
0.4	1.2	GO:0042392	sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.4	1.2	GO:0008511	sodium:potassium:chloride symporter activity(GO:0008511)
0.4	1.6	GO:0015057	thrombin receptor activity(GO:0015057)
0.4	2.6	GO:0001595	angiotensin receptor activity(GO:0001595)
0.4	2.1	GO:0008349	MAP kinase kinase kinase kinase activity(GO:0008349)
0.3	3.4	GO:0015143	urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702)
0.3	3.0	GO:0008559	xenobiotic-transporting ATPase activity(GO:0008559)
0.3	5.5	GO:0005523	tropomyosin binding(GO:0005523)
0.3	3.8	GO:0033691	sialic acid binding(GO:0033691)
0.3	6.0	GO:0017081	chloride channel regulator activity(GO:0017081)
0.3	1.9	GO:1990715	mRNA CDS binding(GO:1990715)
0.3	4.3	GO:0016805	dipeptidase activity(GO:0016805)
0.3	1.7	GO:0004028	3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.3	1.6	GO:0004366	glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.3	3.8	GO:0016500	protein-hormone receptor activity(GO:0016500)
0.3	3.3	GO:0019841	retinol binding(GO:0019841)
0.2	2.4	GO:0051011	microtubule minus-end binding(GO:0051011)
0.2	57.8	GO:0005096	GTPase activator activity(GO:0005096)
0.2	7.6	GO:0005109	frizzled binding(GO:0005109)
0.2	1.8	GO:0005412	glucose:sodium symporter activity(GO:0005412)
0.2	2.8	GO:0017017	MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.2	2.9	GO:0050811	GABA receptor binding(GO:0050811)
0.2	3.9	GO:0019865	immunoglobulin binding(GO:0019865)
0.2	0.6	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.2	1.5	GO:0019855	calcium channel inhibitor activity(GO:0019855)
0.1	3.0	GO:0042056	chemoattractant activity(GO:0042056)
0.1	3.8	GO:0070412	R-SMAD binding(GO:0070412)
0.1	12.1	GO:0005200	structural constituent of cytoskeleton(GO:0005200)
0.1	0.6	GO:0070404	NADH binding(GO:0070404)
0.1	1.4	GO:0005225	volume-sensitive anion channel activity(GO:0005225)
0.1	2.3	GO:0005248	voltage-gated sodium channel activity(GO:0005248)
0.1	4.5	GO:0004601	peroxidase activity(GO:0004601)
0.1	3.8	GO:0008138	protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.1	6.5	GO:0005544	calcium-dependent phospholipid binding(GO:0005544)
0.1	2.8	GO:0070064	proline-rich region binding(GO:0070064)
0.1	1.3	GO:0005521	lamin binding(GO:0005521)
0.1	1.4	GO:0004745	retinol dehydrogenase activity(GO:0004745)
0.1	1.2	GO:0008271	secondary active sulfate transmembrane transporter activity(GO:0008271)
0.1	7.0	GO:0016503	pheromone receptor activity(GO:0016503)
0.1	0.7	GO:0004708	MAP kinase kinase activity(GO:0004708)
0.1	0.4	GO:0003840	gamma-glutamyltransferase activity(GO:0003840) glutathione hydrolase activity(GO:0036374)
0.1	2.4	GO:0005484	SNAP receptor activity(GO:0005484)
0.1	1.3	GO:0004890	GABA-A receptor activity(GO:0004890)
0.1	2.1	GO:0004180	carboxypeptidase activity(GO:0004180)
0.1	2.7	GO:0070888	E-box binding(GO:0070888)
0.1	0.2	GO:0004466	long-chain-acyl-CoA dehydrogenase activity(GO:0004466)
0.0	2.0	GO:0070330	aromatase activity(GO:0070330)
0.0	1.1	GO:0000993	RNA polymerase II core binding(GO:0000993)
0.0	0.6	GO:0033038	bitter taste receptor activity(GO:0033038)
0.0	0.6	GO:0035925	mRNA 3'-UTR AU-rich region binding(GO:0035925)
0.0	0.2	GO:0004691	cAMP-dependent protein kinase activity(GO:0004691)
0.0	0.9	GO:0008327	methyl-CpG binding(GO:0008327)
0.0	1.0	GO:0015459	potassium channel regulator activity(GO:0015459)
0.0	4.0	GO:0051015	actin filament binding(GO:0051015)
0.0	5.1	GO:0005516	calmodulin binding(GO:0005516)
0.0	4.2	GO:0044325	ion channel binding(GO:0044325)
0.0	1.3	GO:0005504	fatty acid binding(GO:0005504)
0.0	0.6	GO:0017127	cholesterol transporter activity(GO:0017127)
0.0	9.3	GO:0046873	metal ion transmembrane transporter activity(GO:0046873)
0.0	0.2	GO:0004630	phospholipase D activity(GO:0004630)
0.0	0.7	GO:0042605	peptide antigen binding(GO:0042605)
0.0	0.5	GO:0015020	glucuronosyltransferase activity(GO:0015020)
0.0	0.1	GO:0042609	CD4 receptor binding(GO:0042609)
0.0	9.1	GO:0005509	calcium ion binding(GO:0005509)
0.0	3.5	GO:0061630	ubiquitin protein ligase activity(GO:0061630)
0.0	0.9	GO:0019003	GDP binding(GO:0019003)
0.0	0.3	GO:0003950	NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0	2.1	GO:0000287	magnesium ion binding(GO:0000287)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	24.8	PID ILK PATHWAY	Integrin-linked kinase signaling
0.3	27.9	PID TRKR PATHWAY	Neurotrophic factor-mediated Trk receptor signaling
0.2	6.1	PID INTEGRIN A9B1 PATHWAY	Alpha9 beta1 integrin signaling events
0.2	5.5	ST MYOCYTE AD PATHWAY	Myocyte Adrenergic Pathway is a specific case of the generalized Adrenergic Pathway.
0.2	11.3	PID LKB1 PATHWAY	LKB1 signaling events
0.2	11.8	PID AP1 PATHWAY	AP-1 transcription factor network
0.1	7.4	PID FGF PATHWAY	FGF signaling pathway
0.1	6.6	PID ATF2 PATHWAY	ATF-2 transcription factor network
0.1	5.6	PID LYSOPHOSPHOLIPID PATHWAY	LPA receptor mediated events
0.1	0.7	PID LYMPH ANGIOGENESIS PATHWAY	VEGFR3 signaling in lymphatic endothelium
0.1	1.8	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.1	4.7	PID BMP PATHWAY	BMP receptor signaling
0.1	1.6	ST GA12 PATHWAY	G alpha 12 Pathway
0.1	4.5	PID VEGFR1 2 PATHWAY	Signaling events mediated by VEGFR1 and VEGFR2
0.1	1.3	PID RET PATHWAY	Signaling events regulated by Ret tyrosine kinase
0.1	1.6	PID RAC1 PATHWAY	RAC1 signaling pathway
0.1	1.8	PID RHODOPSIN PATHWAY	Visual signal transduction: Rods
0.1	1.9	PID ECADHERIN STABILIZATION PATHWAY	Stabilization and expansion of the E-cadherin adherens junction
0.0	3.8	PID PDGFRB PATHWAY	PDGFR-beta signaling pathway
0.0	2.2	PID P53 REGULATION PATHWAY	p53 pathway
0.0	7.5	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.0	0.2	ST INTERFERON GAMMA PATHWAY	Interferon gamma pathway.
0.0	0.9	PID MTOR 4PATHWAY	mTOR signaling pathway
0.0	1.6	PID MYC ACTIV PATHWAY	Validated targets of C-MYC transcriptional activation
0.0	0.3	ST P38 MAPK PATHWAY	p38 MAPK Pathway
0.0	0.6	PID TNF PATHWAY	TNF receptor signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.9	29.8	REACTOME IONOTROPIC ACTIVITY OF KAINATE RECEPTORS	Genes involved in Ionotropic activity of Kainate Receptors
0.6	7.4	REACTOME SIGNALING BY FGFR3 MUTANTS	Genes involved in Signaling by FGFR3 mutants
0.4	7.0	REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS	Genes involved in Synthesis of very long-chain fatty acyl-CoAs
0.3	4.5	REACTOME EICOSANOID LIGAND BINDING RECEPTORS	Genes involved in Eicosanoid ligand-binding receptors
0.3	17.4	REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS	Genes involved in Amino acid and oligopeptide SLC transporters
0.3	3.9	REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN	Genes involved in Platelet Adhesion to exposed collagen
0.3	3.0	REACTOME RECYCLING OF BILE ACIDS AND SALTS	Genes involved in Recycling of bile acids and salts
0.2	5.3	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
0.2	5.4	REACTOME METAL ION SLC TRANSPORTERS	Genes involved in Metal ion SLC transporters
0.2	3.0	REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS	Genes involved in Glycogen breakdown (glycogenolysis)
0.2	3.7	REACTOME LYSOSOME VESICLE BIOGENESIS	Genes involved in Lysosome Vesicle Biogenesis
0.2	5.3	REACTOME COMPLEMENT CASCADE	Genes involved in Complement cascade
0.1	4.3	REACTOME INTERACTION BETWEEN L1 AND ANKYRINS	Genes involved in Interaction between L1 and Ankyrins
0.1	17.6	REACTOME PEPTIDE LIGAND BINDING RECEPTORS	Genes involved in Peptide ligand-binding receptors
0.1	0.9	REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK	Genes involved in Regulation of Rheb GTPase activity by AMPK
0.1	4.2	REACTOME PHASE1 FUNCTIONALIZATION OF COMPOUNDS	Genes involved in Phase 1 - Functionalization of compounds
0.1	1.3	REACTOME GABA A RECEPTOR ACTIVATION	Genes involved in GABA A receptor activation
0.1	1.7	REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS	Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)
0.1	2.1	REACTOME SIGNALING BY BMP	Genes involved in Signaling by BMP
0.1	1.8	REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D	Genes involved in Metabolism of steroid hormones and vitamins A and D
0.1	1.8	REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA	Genes involved in Circadian Repression of Expression by REV-ERBA
0.1	2.1	REACTOME INWARDLY RECTIFYING K CHANNELS	Genes involved in Inwardly rectifying K+ channels
0.1	1.3	REACTOME TIE2 SIGNALING	Genes involved in Tie2 Signaling
0.1	4.1	REACTOME TRANSPORT OF GLUCOSE AND OTHER SUGARS BILE SALTS AND ORGANIC ACIDS METAL IONS AND AMINE COMPOUNDS	Genes involved in Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds
0.1	1.6	REACTOME SYNTHESIS OF PA	Genes involved in Synthesis of PA
0.0	2.7	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.0	0.6	REACTOME REGULATION OF PYRUVATE DEHYDROGENASE PDH COMPLEX	Genes involved in Regulation of pyruvate dehydrogenase (PDH) complex
0.0	1.2	REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS	Genes involved in Sphingolipid de novo biosynthesis
0.0	0.7	REACTOME JNK C JUN KINASES PHOSPHORYLATION AND ACTIVATION MEDIATED BY ACTIVATED HUMAN TAK1	Genes involved in JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
0.0	0.5	REACTOME GLUCURONIDATION	Genes involved in Glucuronidation
0.0	0.6	REACTOME DESTABILIZATION OF MRNA BY KSRP	Genes involved in Destabilization of mRNA by KSRP
0.0	0.9	REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS	Genes involved in Golgi Associated Vesicle Biogenesis
0.0	0.3	REACTOME SPRY REGULATION OF FGF SIGNALING	Genes involved in Spry regulation of FGF signaling
0.0	1.9	REACTOME G ALPHA I SIGNALLING EVENTS	Genes involved in G alpha (i) signalling events
0.0	0.2	REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB	Genes involved in PKA-mediated phosphorylation of CREB
0.0	3.0	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0	0.4	REACTOME GLUTATHIONE CONJUGATION	Genes involved in Glutathione conjugation