GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Hinfp Links NCBI RGD Ensembl	ENSRNOG00000009499	histone H4 transcription factor

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hinfp	rn6_v1_chr8_-_48634797_48634797	0.26	1.6e-06	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_-_94352880 Show fit	26.84	ENSRNOT00000035973	Limd2 Links NCBI RGD Ensembl Show fit	LIM domain containing 2
chr8_+_62723788 Show fit	22.47	ENSRNOT00000010620	Sema7a Links NCBI RGD Ensembl Show fit	semaphorin 7A (John Milton Hagen blood group)
chr17_-_44834305 Show fit	20.57	ENSRNOT00000084303	Hist1h2bd Links NCBI RGD Ensembl Show fit	histone cluster 1, H2bd
chr17_+_43423111 Show fit	19.74	ENSRNOT00000022630	Hist1h2ba Links NCBI RGD Ensembl Show fit	histone cluster 1 H2B family member a
chr1_+_221448661 Show fit	17.19	ENSRNOT00000072493	LOC100910252 Links NCBI RGD Ensembl Show fit	sororin-like
chr15_-_44411004 Show fit	17.18	ENSRNOT00000031163	Cdca2 Links NCBI RGD Ensembl Show fit	cell division cycle associated 2
chr17_-_13593423 Show fit	16.07	ENSRNOT00000019234	Cks2 Links NCBI RGD Ensembl Show fit	CDC28 protein kinase regulatory subunit 2
chr15_-_70349983 Show fit	14.25	ENSRNOT00000012167	Diaph3 Links NCBI RGD Ensembl Show fit	diaphanous-related formin 3
chr10_+_55626741 Show fit	14.17	ENSRNOT00000008492	Aurkb Links NCBI RGD Ensembl Show fit	aurora kinase B
chr16_-_36080191 Show fit	13.91	ENSRNOT00000017635	Hmgb2l1 Links NCBI RGD Ensembl Show fit	high mobility group box 2-like 1
chr1_+_192115966 Show fit	13.88	ENSRNOT00000025629	Plk1 Links NCBI RGD Ensembl Show fit	polo-like kinase 1
chr4_+_69384145 Show fit	13.78	ENSRNOT00000084834	Trbv13-2 Links NCBI RGD Ensembl Show fit	T cell receptor beta, variable 13-2
chr2_+_236233239 Show fit	13.08	ENSRNOT00000013694	Lef1 Links NCBI RGD Ensembl Show fit	lymphoid enhancer binding factor 1
chr15_+_23553128 Show fit	12.73	ENSRNOT00000012985	Cdkn3 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase inhibitor 3
chr18_-_28438654 Show fit	12.30	ENSRNOT00000036301	Mzb1 Links NCBI RGD Ensembl Show fit	marginal zone B and B1 cell-specific protein
chr10_-_59698168 Show fit	12.27	ENSRNOT00000074018	Gsg2 Links NCBI RGD Ensembl Show fit	germ cell associated 2 (haspin)
chr15_-_35394792 Show fit	11.95	ENSRNOT00000028058	Gzmc Links NCBI RGD Ensembl Show fit	granzyme C
chr13_-_110257367 Show fit	11.87	ENSRNOT00000005576	Dtl Links NCBI RGD Ensembl Show fit	denticleless E3 ubiquitin protein ligase homolog
chr9_-_103207190 Show fit	11.64	ENSRNOT00000026010	St8sia4 Links NCBI RGD Ensembl Show fit	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
chr11_-_61234944 Show fit	11.59	ENSRNOT00000059680	Cfap44 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 44
chr13_-_101163393 Show fit	11.43	ENSRNOT00000037997	Ccdc185 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 185
chr15_-_29548400 Show fit	11.14	ENSRNOT00000078176	AABR07017639.2 Links NCBI RGD Ensembl Show fit
chr1_-_157700064 Show fit	11.04	ENSRNOT00000031974	Ddias Links NCBI RGD Ensembl Show fit	DNA damage-induced apoptosis suppressor
chr14_+_82375181 Show fit	10.40	ENSRNOT00000023904	Fam53a Links NCBI RGD Ensembl Show fit	family with sequence similarity 53, member A
chr1_+_141391262 Show fit	10.30	ENSRNOT00000031783	Ticrr Links NCBI RGD Ensembl Show fit	TOPBP1-interacting checkpoint and replication regulator
chr4_-_150244372 Show fit	10.17	ENSRNOT00000047685	Ret Links NCBI RGD Ensembl Show fit	ret proto-oncogene
chr12_-_21720094 Show fit	10.06	ENSRNOT00000032838	LOC100910636 Links NCBI RGD Ensembl Show fit	zinc finger CW-type PWWP domain protein 1-like
chr6_+_123974798 Show fit	9.88	ENSRNOT00000075794	Kcnk13 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 13
chr4_+_61420009 Show fit	9.87	ENSRNOT00000082175 ENSRNOT00000011692	Lrguk Links NCBI RGD Ensembl Show fit	leucine-rich repeats and guanylate kinase domain containing
chr17_+_55065621 Show fit	9.45	ENSRNOT00000086342	Zfp438 Links NCBI RGD Ensembl Show fit	zinc finger protein 438
chr5_-_76756140 Show fit	8.70	ENSRNOT00000022107 ENSRNOT00000089251	Ptbp3 Links NCBI RGD Ensembl Show fit	polypyrimidine tract binding protein 3
chr15_-_36451720 Show fit	8.44	ENSRNOT00000075752	LOC691695 Links NCBI RGD Ensembl Show fit	similar to granzyme C
chr7_+_117351648 Show fit	8.39	ENSRNOT00000056421	Smpd5 Links NCBI RGD Ensembl Show fit	sphingomyelin phosphodiesterase 5
chr15_-_46432965 Show fit	8.38	ENSRNOT00000014320	Gata4 Links NCBI RGD Ensembl Show fit	GATA binding protein 4
chr3_-_153321352 Show fit	8.33	ENSRNOT00000064824	Rbl1 Links NCBI RGD Ensembl Show fit	RB transcriptional corepressor like 1
chr19_+_24846938 Show fit	8.30	ENSRNOT00000045974	Ddx39a Links NCBI RGD Ensembl Show fit	DExD-box helicase 39A
chr2_+_219628695 Show fit	8.30	ENSRNOT00000067324	Sass6 Links NCBI RGD Ensembl Show fit	SAS-6 centriolar assembly protein
chr7_+_11660934 Show fit	8.25	ENSRNOT00000022336	Lmnb2 Links NCBI RGD Ensembl Show fit	lamin B2
chr20_-_2040080 Show fit	8.20	ENSRNOT00000082965 ENSRNOT00000080237	RT1-M5 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus M5
chr3_+_20163337 Show fit	8.20	ENSRNOT00000075136	AABR07051726.1 Links NCBI RGD Ensembl Show fit
chrX_+_28435507 Show fit	8.12	ENSRNOT00000005615	Prps2 Links NCBI RGD Ensembl Show fit	phosphoribosyl pyrophosphate synthetase 2
chr10_+_47412582 Show fit	8.09	ENSRNOT00000003139	Tnfrsf13b Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 13B
chr17_+_27452638 Show fit	7.98	ENSRNOT00000038349	Cage1 Links NCBI RGD Ensembl Show fit	cancer antigen 1
chr1_+_198744050 Show fit	7.97	ENSRNOT00000024404	Itgal Links NCBI RGD Ensembl Show fit	integrin subunit alpha L
chr2_-_127778202 Show fit	7.90	ENSRNOT00000092191 ENSRNOT00000093683	LOC365778 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1700034I23
chr1_-_206282575 Show fit	7.84	ENSRNOT00000024974	Adam12 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 12
chr8_-_69121192 Show fit	7.80	ENSRNOT00000012404	Zwilch Links NCBI RGD Ensembl Show fit	zwilch kinetochore protein
chr11_+_86329012 Show fit	7.77	ENSRNOT00000072027	Cdc45 Links NCBI RGD Ensembl Show fit	cell division cycle 45
chr7_+_18310624 Show fit	7.76	ENSRNOT00000075258	Actl9 Links NCBI RGD Ensembl Show fit	actin-like 9
chr6_+_10642700 Show fit	7.74	ENSRNOT00000040329	LOC100359600 Links NCBI RGD Ensembl Show fit	karyopherin alpha 2-like
chr10_-_95212111 Show fit	7.71	ENSRNOT00000020795	Kpna2 Links NCBI RGD Ensembl Show fit	karyopherin subunit alpha 2
chr3_-_176144531 Show fit	7.65	ENSRNOT00000082266	Tcfl5 Links NCBI RGD Ensembl Show fit	transcription factor like 5
chr1_+_221420271 Show fit	7.62	ENSRNOT00000028481	LOC687780 Links NCBI RGD Ensembl Show fit	similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed
chr6_+_2886764 Show fit	7.55	ENSRNOT00000023114	Ttc39d Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 39D
chr1_-_226255886 Show fit	7.46	ENSRNOT00000027842	Fen1 Links NCBI RGD Ensembl Show fit	flap structure-specific endonuclease 1
chr8_-_61079526 Show fit	7.32	ENSRNOT00000068658	Peak1 Links NCBI RGD Ensembl Show fit	pseudopodium-enriched atypical kinase 1
chr19_+_55300395 Show fit	7.29	ENSRNOT00000092169	Ctu2 Links NCBI RGD Ensembl Show fit	cytosolic thiouridylase subunit 2
chr1_+_205842489 Show fit	7.19	ENSRNOT00000081610	Fank1 Links NCBI RGD Ensembl Show fit	fibronectin type 3 and ankyrin repeat domains 1
chr8_+_5967463 Show fit	7.07	ENSRNOT00000086251	Tmem123 Links NCBI RGD Ensembl Show fit	transmembrane protein 123
chr2_+_30664217 Show fit	7.06	ENSRNOT00000076786	Ak6 Links NCBI RGD Ensembl Show fit	adenylate kinase 6
chr8_-_84835060 Show fit	6.97	ENSRNOT00000007867	Lrrc1 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 1
chr2_-_116161998 Show fit	6.97	ENSRNOT00000012560	Gpr160 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 160
chr20_-_13458110 Show fit	6.96	ENSRNOT00000072183	Slc5a4 Links NCBI RGD Ensembl Show fit	solute carrier family 5 member 4
chr10_+_105500290 Show fit	6.95	ENSRNOT00000079080 ENSRNOT00000083593	Sphk1 Links NCBI RGD Ensembl Show fit	sphingosine kinase 1
chrX_+_130007087 Show fit	6.92	ENSRNOT00000074996	Tex13c Links NCBI RGD Ensembl Show fit	TEX13 family member C
chr7_+_125833987 Show fit	6.83	ENSRNOT00000080933	Nup50 Links NCBI RGD Ensembl Show fit	nucleoporin 50
chr16_+_36116258 Show fit	6.77	ENSRNOT00000017652	Sap30 Links NCBI RGD Ensembl Show fit	Sin3A associated protein 30
chr10_-_77512032 Show fit	6.64	ENSRNOT00000003295	Pctp Links NCBI RGD Ensembl Show fit	phosphatidylcholine transfer protein
chr11_-_1437732 Show fit	6.61	ENSRNOT00000037345	Csnka2ip Links NCBI RGD Ensembl Show fit	casein kinase 2, alpha prime interacting protein
chr6_+_135866739 Show fit	6.59	ENSRNOT00000013460	Exoc3l4 Links NCBI RGD Ensembl Show fit	exocyst complex component 3-like 4
chr8_+_114986326 Show fit	6.58	ENSRNOT00000038166	Poc1a Links NCBI RGD Ensembl Show fit	POC1 centriolar protein A
chr19_+_14523554 Show fit	6.52	ENSRNOT00000084271 ENSRNOT00000064731	Mcm5 Links NCBI RGD Ensembl Show fit	minichromosome maintenance complex component 5
chr6_-_142635763 Show fit	6.39	ENSRNOT00000048908	AABR07065815.2 Links NCBI RGD Ensembl Show fit
chr4_+_118243132 Show fit	6.34	ENSRNOT00000023654	RGD1306746 Links NCBI RGD Ensembl Show fit	similar to Hypothetical protein MGC25529
chr2_+_208323882 Show fit	6.33	ENSRNOT00000085178	Tmigd3 Links NCBI RGD Ensembl Show fit	transmembrane and immunoglobulin domain containing 3
chr6_-_142585188 Show fit	6.18	ENSRNOT00000067437	AABR07065815.1 Links NCBI RGD Ensembl Show fit
chr1_+_141447022 Show fit	6.13	ENSRNOT00000020690	AC096024.1 Links NCBI RGD Ensembl Show fit
chr8_-_55491152 Show fit	6.12	ENSRNOT00000014965	LOC100359479 Links NCBI RGD Ensembl Show fit	rCG58364-like
chr14_-_33430956 Show fit	6.07	ENSRNOT00000002860	Thegl Links NCBI RGD Ensembl Show fit	theg spermatid protein-like
chr17_+_45175121 Show fit	6.03	ENSRNOT00000080417	Nkapl Links NCBI RGD Ensembl Show fit	NFKB activating protein-like
chr8_-_23148396 Show fit	6.02	ENSRNOT00000075237	Acp5 Links NCBI RGD Ensembl Show fit	acid phosphatase 5, tartrate resistant
chr9_+_98313632 Show fit	5.89	ENSRNOT00000027012	Ramp1 Links NCBI RGD Ensembl Show fit	receptor activity modifying protein 1
chr17_+_15429708 Show fit	5.86	ENSRNOT00000093261	LOC679342 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC679342
chr1_+_78767911 Show fit	5.85	ENSRNOT00000022360	Prkd2 Links NCBI RGD Ensembl Show fit	protein kinase D2
chr6_-_1942972 Show fit	5.84	ENSRNOT00000048711	Cdc42ep3 Links NCBI RGD Ensembl Show fit	CDC42 effector protein 3
chr16_+_68633720 Show fit	5.84	ENSRNOT00000081838	LOC100911229 Links NCBI RGD Ensembl Show fit	sperm motility kinase-like
chr3_+_65815080 Show fit	5.68	ENSRNOT00000006429	Ube2e3 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2E 3
chr14_-_86117578 Show fit	5.66	ENSRNOT00000019288	Pold2 Links NCBI RGD Ensembl Show fit	DNA polymerase delta 2, accessory subunit
chr20_-_45259928 Show fit	5.63	ENSRNOT00000087226	Slc16a10 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 10
chr4_+_87293871 Show fit	5.61	ENSRNOT00000090943	AABR07060628.1 Links NCBI RGD Ensembl Show fit
chr7_+_124391432 Show fit	5.59	ENSRNOT00000013977	Bik Links NCBI RGD Ensembl Show fit	BCL2-interacting killer
chr1_+_47942500 Show fit	5.54	ENSRNOT00000025936	Wtap Links NCBI RGD Ensembl Show fit	Wilms tumor 1 associated protein
chr1_+_222907159 Show fit	5.51	ENSRNOT00000032123	Hrasls5 Links NCBI RGD Ensembl Show fit	HRAS-like suppressor family, member 5
chr4_-_83137527 Show fit	5.46	ENSRNOT00000039580	Jazf1 Links NCBI RGD Ensembl Show fit	JAZF zinc finger 1
chr8_-_111107599 Show fit	5.41	ENSRNOT00000031313	Cep63 Links NCBI RGD Ensembl Show fit	centrosomal protein 63
chr10_-_56864005 Show fit	5.40	ENSRNOT00000033098 ENSRNOT00000091131	Alox12 Links NCBI RGD Ensembl Show fit	arachidonate 12-lipoxygenase, 12S type
chr3_+_67870111 Show fit	5.38	ENSRNOT00000012628	Nup35 Links NCBI RGD Ensembl Show fit	nucleoporin 35
chr7_-_18793289 Show fit	5.31	ENSRNOT00000036375	AABR07056026.1 Links NCBI RGD Ensembl Show fit
chr1_+_85386470 Show fit	5.30	ENSRNOT00000093332 ENSRNOT00000044326	Plekhg2 Links NCBI RGD Ensembl Show fit	pleckstrin homology and RhoGEF domain containing G2
chr14_-_80544342 Show fit	5.28	ENSRNOT00000012304	Hmx1 Links NCBI RGD Ensembl Show fit	H6 family homeobox 1
chr8_-_36467627 Show fit	5.24	ENSRNOT00000082346	Fam118b Links NCBI RGD Ensembl Show fit	family with sequence similarity 118, member B
chr2_-_60657712 Show fit	5.19	ENSRNOT00000040348	Rai14 Links NCBI RGD Ensembl Show fit	retinoic acid induced 14
chr13_+_96303703 Show fit	5.14	ENSRNOT00000084718 ENSRNOT00000029723	Efcab2 Links NCBI RGD Ensembl Show fit	EF-hand calcium binding domain 2
chr10_+_56610051 Show fit	5.08	ENSRNOT00000024348	Dvl2 Links NCBI RGD Ensembl Show fit	dishevelled segment polarity protein 2
chr1_-_165891627 Show fit	5.07	ENSRNOT00000038408	Relt Links NCBI RGD Ensembl Show fit	RELT tumor necrosis factor receptor
chr12_-_31323810 Show fit	5.06	ENSRNOT00000001247	Ran Links NCBI RGD Ensembl Show fit	RAN, member RAS oncogene family
chr16_-_20807070 Show fit	5.03	ENSRNOT00000072536	Comp Links NCBI RGD Ensembl Show fit	cartilage oligomeric matrix protein
chr6_-_50923510 Show fit	4.93	ENSRNOT00000010631	Bcap29 Links NCBI RGD Ensembl Show fit	B-cell receptor-associated protein 29
chr2_+_251805392 Show fit	4.93	ENSRNOT00000019911	Bcl10 Links NCBI RGD Ensembl Show fit	B-cell CLL/lymphoma 10
chr1_-_241875864 Show fit	4.92	ENSRNOT00000091282	Fam189a2 Links NCBI RGD Ensembl Show fit	family with sequence similarity 189, member A2
chr17_-_15429322 Show fit	4.90	ENSRNOT00000093381	Nol8 Links NCBI RGD Ensembl Show fit	nucleolar protein 8
chr14_-_3846891 Show fit	4.89	ENSRNOT00000068520	Cdc7 Links NCBI RGD Ensembl Show fit	cell division cycle 7
chr3_+_159569363 Show fit	4.88	ENSRNOT00000064159	Tox2 Links NCBI RGD Ensembl Show fit	TOX high mobility group box family member 2
chr19_+_39087990 Show fit	4.81	ENSRNOT00000027553	Utp4 Links NCBI RGD Ensembl Show fit	UTP4 small subunit processome component
chr17_+_14469488 Show fit	4.81	ENSRNOT00000060670	AABR07027111.1 Links NCBI RGD Ensembl Show fit
chr1_+_101214593 Show fit	4.74	ENSRNOT00000028086	Tead2 Links NCBI RGD Ensembl Show fit	TEA domain transcription factor 2
chr1_-_166912524 Show fit	4.74	ENSRNOT00000092952	Inppl1 Links NCBI RGD Ensembl Show fit	inositol polyphosphate phosphatase-like 1
chr20_-_34929965 Show fit	4.73	ENSRNOT00000004499	Mcm9 Links NCBI RGD Ensembl Show fit	minichromosome maintenance 9 homologous recombination repair factor
chr5_-_144221263 Show fit	4.70	ENSRNOT00000013570	Thrap3 Links NCBI RGD Ensembl Show fit	thyroid hormone receptor associated protein 3
chr2_+_209433103 Show fit	4.70	ENSRNOT00000024036	Lrif1 Links NCBI RGD Ensembl Show fit	ligand dependent nuclear receptor interacting factor 1
chr17_-_22311392 Show fit	4.65	ENSRNOT00000019389	Hivep1 Links NCBI RGD Ensembl Show fit	human immunodeficiency virus type I enhancer binding protein 1
chr1_-_259357056 Show fit	4.63	ENSRNOT00000022000	Pdlim1 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 1
chr1_-_214202853 Show fit	4.62	ENSRNOT00000022954	Lmntd2 Links NCBI RGD Ensembl Show fit	lamin tail domain containing 2
chr2_+_113066885 Show fit	4.57	ENSRNOT00000034960	Ghsr Links NCBI RGD Ensembl Show fit	growth hormone secretagogue receptor
chr1_+_47942800 Show fit	4.56	ENSRNOT00000079312	Wtap Links NCBI RGD Ensembl Show fit	Wilms tumor 1 associated protein
chr1_-_187766670 Show fit	4.51	ENSRNOT00000092513 ENSRNOT00000092282	Rps15a Links NCBI RGD Ensembl Show fit	ribosomal protein S15a
chr10_-_104075777 Show fit	4.48	ENSRNOT00000004862	Hn1 Links NCBI RGD Ensembl Show fit	hematological and neurological expressed 1
chr5_+_141560192 Show fit	4.46	ENSRNOT00000023354	Mycbp Links NCBI RGD Ensembl Show fit	Myc binding protein
chr5_-_105212173 Show fit	4.43	ENSRNOT00000010383	Rps6 Links NCBI RGD Ensembl Show fit	ribosomal protein S6
chr11_-_61530830 Show fit	4.41	ENSRNOT00000059666 ENSRNOT00000068345	Naa50 Links NCBI RGD Ensembl Show fit	N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr6_-_140266507 Show fit	4.41	ENSRNOT00000082865	AABR07065753.1 Links NCBI RGD Ensembl Show fit
chr5_-_72287669 Show fit	4.36	ENSRNOT00000022255	Klf4 Links NCBI RGD Ensembl Show fit	Kruppel like factor 4
chr14_-_21898284 Show fit	4.30	ENSRNOT00000036314	Prr27 Links NCBI RGD Ensembl Show fit	proline rich 27
chr14_+_115166416 Show fit	4.28	ENSRNOT00000088916 ENSRNOT00000078329	Psme4 Links NCBI RGD Ensembl Show fit	proteasome activator subunit 4
chr20_+_45458558 Show fit	4.28	ENSRNOT00000000713	Cdk19 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 19
chr5_-_57845509 Show fit	4.26	ENSRNOT00000035541	Kif24 Links NCBI RGD Ensembl Show fit	kinesin family member 24
chr17_-_15429051 Show fit	4.23	ENSRNOT00000074667	Nol8 Links NCBI RGD Ensembl Show fit	nucleolar protein 8
chr6_-_47811853 Show fit	4.21	ENSRNOT00000010942	Allc Links NCBI RGD Ensembl Show fit	allantoicase
chr6_+_135856218 Show fit	4.10	ENSRNOT00000066715	RGD1560608 Links NCBI RGD Ensembl Show fit	similar to novel protein
chr12_+_21981755 Show fit	4.09	ENSRNOT00000001871	LOC100910540 Links NCBI RGD Ensembl Show fit	7SK snRNA methylphosphate capping enzyme-like
chr2_+_157453428 Show fit	4.09	ENSRNOT00000051494	Lekr1 Links NCBI RGD Ensembl Show fit	leucine, glutamate and lysine rich 1
chr5_-_39611053 Show fit	4.07	ENSRNOT00000046595	Fhl5 Links NCBI RGD Ensembl Show fit	four and a half LIM domains 5
chr1_+_88875375 Show fit	4.03	ENSRNOT00000028284	Tyrobp Links NCBI RGD Ensembl Show fit	Tyro protein tyrosine kinase binding protein
chr2_-_174012676 Show fit	4.03	ENSRNOT00000013585	Pdcd10 Links NCBI RGD Ensembl Show fit	programmed cell death 10
chr7_-_12283608 Show fit	4.01	ENSRNOT00000029791	Rps15 Links NCBI RGD Ensembl Show fit	ribosomal protein S15
chr5_-_57683932 Show fit	4.01	ENSRNOT00000074796	Dcaf12 Links NCBI RGD Ensembl Show fit	DDB1 and CUL4 associated factor 12
chr10_+_11879418 Show fit	4.00	ENSRNOT00000068577	RGD1561796 Links NCBI RGD Ensembl Show fit	RGD1561796
chr17_-_42241066 Show fit	3.96	ENSRNOT00000059570	Tdp2 Links NCBI RGD Ensembl Show fit	tyrosyl-DNA phosphodiesterase 2
chr5_-_152406447 Show fit	3.95	ENSRNOT00000065983 ENSRNOT00000078063	Cep85 Links NCBI RGD Ensembl Show fit	centrosomal protein 85
chr16_-_48692476 Show fit	3.90	ENSRNOT00000013118	Irf2 Links NCBI RGD Ensembl Show fit	interferon regulatory factor 2
chr2_-_208152179 Show fit	3.88	ENSRNOT00000068152	Ddx20 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 20
chr1_-_84008293 Show fit	3.87	ENSRNOT00000002053	Snrpa Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide A
chr17_+_10066187 Show fit	3.87	ENSRNOT00000091200	Uimc1 Links NCBI RGD Ensembl Show fit	ubiquitin interaction motif containing 1
chr14_+_23611735 Show fit	3.85	ENSRNOT00000031074	Cenpc Links NCBI RGD Ensembl Show fit	centromere protein C
chr1_+_16819170 Show fit	3.84	ENSRNOT00000019734 ENSRNOT00000086756	Hbs1l Links NCBI RGD Ensembl Show fit	HBS1-like translational GTPase
chr18_+_30869628 Show fit	3.82	ENSRNOT00000060470	Pcdhgb4 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 4
chr7_+_144865608 Show fit	3.80	ENSRNOT00000091596 ENSRNOT00000055285	Hnrnpa1 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A1
chr1_+_23977688 Show fit	3.74	ENSRNOT00000014805	Tbpl1 Links NCBI RGD Ensembl Show fit	TATA-box binding protein like 1
chr6_+_78172762 Show fit	3.74	ENSRNOT00000083110 ENSRNOT00000012282	LOC314140 Links NCBI RGD Ensembl Show fit Mipol1 Links NCBI RGD Ensembl Show fit	ribose-phosphate pyrophosphokinase I -like mirror-image polydactyly 1
chr8_-_128026841 Show fit	3.68	ENSRNOT00000018341	Myd88 Links NCBI RGD Ensembl Show fit	myeloid differentiation primary response 88
chr20_+_34894419 Show fit	3.66	ENSRNOT00000000471	Asf1a Links NCBI RGD Ensembl Show fit	anti-silencing function 1A histone chaperone
chrX_+_123662477 Show fit	3.59	ENSRNOT00000075314	Sowahd Links NCBI RGD Ensembl Show fit	sosondowah ankyrin repeat domain family member D
chr1_-_65551043 Show fit	3.58	ENSRNOT00000029996	Trim28 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 28
chr4_+_71740532 Show fit	3.57	ENSRNOT00000023537	Zyx Links NCBI RGD Ensembl Show fit	zyxin
chr4_+_119633755 Show fit	3.54	ENSRNOT00000013274	Efcc1 Links NCBI RGD Ensembl Show fit	EF-hand and coiled-coil domain containing 1
chr1_-_252461461 Show fit	3.53	ENSRNOT00000026093	Ankrd22 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 22
chr14_-_78377825 Show fit	3.51	ENSRNOT00000068104	AABR07015812.1 Links NCBI RGD Ensembl Show fit
chr8_+_5993941 Show fit	3.50	ENSRNOT00000014065	Tmem123 Links NCBI RGD Ensembl Show fit	transmembrane protein 123
chr2_-_30664163 Show fit	3.50	ENSRNOT00000024801	Rad17 Links NCBI RGD Ensembl Show fit	RAD17 checkpoint clamp loader component
chr13_+_48790767 Show fit	3.48	ENSRNOT00000087504	Elk4 Links NCBI RGD Ensembl Show fit	ELK4, ETS transcription factor
chr1_+_274310153 Show fit	3.47	ENSRNOT00000054686	Smc3 Links NCBI RGD Ensembl Show fit	structural maintenance of chromosomes 3
chr13_-_70573572 Show fit	3.39	ENSRNOT00000092339	Lamc2 Links NCBI RGD Ensembl Show fit	laminin subunit gamma 2
chr15_-_51839341 Show fit	3.39	ENSRNOT00000011277	RGD1308117 Links NCBI RGD Ensembl Show fit	similar to 9930012K11Rik protein
chr17_+_15194262 Show fit	3.39	ENSRNOT00000073070	AABR07072539.1 Links NCBI RGD Ensembl Show fit
chr6_-_136279399 Show fit	3.38	ENSRNOT00000015333	Bag5l1 Links NCBI RGD Ensembl Show fit	BCL2-associated athanogene 5-like 1
chr8_+_59711549 Show fit	3.38	ENSRNOT00000019539	Ube2q2 Links NCBI RGD Ensembl Show fit	ubiquitin conjugating enzyme E2 Q2
chr17_-_79676499 Show fit	3.35	ENSRNOT00000022711	Itga8 Links NCBI RGD Ensembl Show fit	integrin subunit alpha 8
chr1_+_248195797 Show fit	3.34	ENSRNOT00000066891	LOC103690131 Links NCBI RGD Ensembl Show fit	tumor protein D55-like
chr5_-_105200148 Show fit	3.31	ENSRNOT00000073270	Rps6 Links NCBI RGD Ensembl Show fit	ribosomal protein S6
chr5_+_14983371 Show fit	3.28	ENSRNOT00000049609	Sumo4 Links NCBI RGD Ensembl Show fit	small ubiquitin-like modifier 4
chr3_+_161272385 Show fit	3.26	ENSRNOT00000021052	Zswim3 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 3
chr9_-_95290931 Show fit	3.26	ENSRNOT00000025300	Dnajb3 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member B3
chr9_-_92435363 Show fit	3.26	ENSRNOT00000093735 ENSRNOT00000022822 ENSRNOT00000093245	Trip12 Links NCBI RGD Ensembl Show fit	thyroid hormone receptor interactor 12
chr10_-_12871965 Show fit	3.25	ENSRNOT00000004583	Gm8225 Links NCBI RGD Ensembl Show fit	predicted gene 8225
chr4_-_59014416 Show fit	3.23	ENSRNOT00000049811	RGD1561636 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L38
chr7_+_125833557 Show fit	3.22	ENSRNOT00000018155	Nup50 Links NCBI RGD Ensembl Show fit	nucleoporin 50
chr2_+_205662588 Show fit	3.22	ENSRNOT00000025592	Bcas2 Links NCBI RGD Ensembl Show fit	BCAS2, pre-mRNA processing factor
chrX_+_709306 Show fit	3.21	ENSRNOT00000071047	Ssx2 Links NCBI RGD Ensembl Show fit	synovial sarcoma, X breakpoint 2
chr1_-_165530095 Show fit	3.21	ENSRNOT00000024256	Dnajb13 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member B13
chr3_+_103726238 Show fit	3.20	ENSRNOT00000006776	Lpcat4 Links NCBI RGD Ensembl Show fit	lysophosphatidylcholine acyltransferase 4
chr15_-_37030240 Show fit	3.19	ENSRNOT00000028219 ENSRNOT00000088037	Pspc1 Links NCBI RGD Ensembl Show fit	paraspeckle component 1
chr10_+_37458452 Show fit	3.17	ENSRNOT00000079411	Cdkl3 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase-like 3
chr1_-_84834039 Show fit	3.17	ENSRNOT00000088960	AABR07002782.1 Links NCBI RGD Ensembl Show fit
chr10_-_62191512 Show fit	3.17	ENSRNOT00000090262	Rpa1 Links NCBI RGD Ensembl Show fit	replication protein A1
chr2_-_29121104 Show fit	3.16	ENSRNOT00000020543	Tnpo1 Links NCBI RGD Ensembl Show fit	transportin 1
chr13_-_113817995 Show fit	3.15	ENSRNOT00000057151	Cd46 Links NCBI RGD Ensembl Show fit	CD46 molecule
chr2_+_30664441 Show fit	3.08	ENSRNOT00000061166	Ak6 Links NCBI RGD Ensembl Show fit	adenylate kinase 6
chr18_-_63394690 Show fit	3.05	ENSRNOT00000090078 ENSRNOT00000029431	Cep76 Links NCBI RGD Ensembl Show fit	centrosomal protein 76
chr1_-_197997664 Show fit	3.02	ENSRNOT00000025898	Cln3 Links NCBI RGD Ensembl Show fit	ceroid-lipofuscinosis, neuronal 3
chr11_-_55240241 Show fit	3.00	ENSRNOT00000064614	Dppa4 Links NCBI RGD Ensembl Show fit	developmental pluripotency associated 4

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.4	13.1	GO:0071899	trachea submucosa development(GO:0061152) trachea gland development(GO:0061153) odontoblast differentiation(GO:0071895) regulation of estrogen receptor binding(GO:0071898) negative regulation of estrogen receptor binding(GO:0071899)
4.0	24.0	GO:0035093	spermatogenesis, exchange of chromosomal proteins(GO:0035093)
3.5	14.2	GO:0043988	histone H3-S28 phosphorylation(GO:0043988)
3.4	10.2	GO:0061146	Peyer's patch morphogenesis(GO:0061146)
3.1	12.3	GO:0002378	immunoglobulin biosynthetic process(GO:0002378) negative regulation of glucose import in response to insulin stimulus(GO:2001274)
3.0	11.9	GO:0046391	5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
2.8	8.4	GO:0003285	septum secundum development(GO:0003285) embryonic heart tube anterior/posterior pattern specification(GO:0035054) negative regulation of connective tissue replacement(GO:1905204)
2.8	13.9	GO:0040038	polar body extrusion after meiotic divisions(GO:0040038)
2.6	7.8	GO:0006267	pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) DNA replication preinitiation complex assembly(GO:0071163) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
2.6	12.8	GO:0030174	regulation of DNA-dependent DNA replication initiation(GO:0030174)
2.4	7.3	GO:0002143	tRNA wobble position uridine thiolation(GO:0002143)
2.3	11.6	GO:0001574	ganglioside biosynthetic process(GO:0001574)
1.9	7.5	GO:0043137	DNA replication, removal of RNA primer(GO:0043137)
1.8	5.5	GO:0043134	hindgut contraction(GO:0043133) regulation of hindgut contraction(GO:0043134)
1.7	22.5	GO:0060907	positive regulation of macrophage cytokine production(GO:0060907)
1.5	12.3	GO:0035405	histone-threonine phosphorylation(GO:0035405)
1.5	4.4	GO:2000342	negative regulation of chemokine (C-X-C motif) ligand 2 production(GO:2000342)
1.4	4.2	GO:0043605	cellular amide catabolic process(GO:0043605)
1.4	6.9	GO:0019371	cyclooxygenase pathway(GO:0019371)
1.4	2.8	GO:0000294	nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay(GO:0000294)
1.3	4.0	GO:1903588	negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis(GO:1903588)
1.3	6.6	GO:0003431	growth plate cartilage chondrocyte development(GO:0003431)
1.3	23.6	GO:0002227	innate immune response in mucosa(GO:0002227)
1.3	5.2	GO:0030576	Cajal body organization(GO:0030576)
1.3	9.1	GO:0000056	ribosomal small subunit export from nucleus(GO:0000056)
1.3	3.8	GO:0090172	microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
1.3	15.2	GO:0006265	DNA topological change(GO:0006265)
1.3	5.0	GO:0000727	double-strand break repair via break-induced replication(GO:0000727)
1.2	4.9	GO:0002905	mature B cell apoptotic process(GO:0002901) regulation of mature B cell apoptotic process(GO:0002905) negative regulation of mature B cell apoptotic process(GO:0002906)
1.2	3.7	GO:0072566	chemokine (C-X-C motif) ligand 1 production(GO:0072566) regulation of chemokine (C-X-C motif) ligand 1 production(GO:2000338)
1.2	24.0	GO:0006607	NLS-bearing protein import into nucleus(GO:0006607)
1.1	5.6	GO:0015801	aromatic amino acid transport(GO:0015801)
1.1	3.3	GO:2000721	positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000721)
1.1	7.7	GO:1903347	oogenesis stage(GO:0022605) negative regulation of bicellular tight junction assembly(GO:1903347)
1.1	11.0	GO:2000270	negative regulation of fibroblast apoptotic process(GO:2000270)
1.1	5.4	GO:0051121	hepoxilin metabolic process(GO:0051121) hepoxilin biosynthetic process(GO:0051122)
1.1	3.2	GO:0043382	positive regulation of memory T cell differentiation(GO:0043382)
1.0	5.1	GO:0044340	canonical Wnt signaling pathway involved in regulation of cell proliferation(GO:0044340)
1.0	9.1	GO:1902570	protein localization to nucleolus(GO:1902570)
1.0	6.0	GO:0032929	negative regulation of superoxide anion generation(GO:0032929)
1.0	5.9	GO:0089700	protein kinase D signaling(GO:0089700)
1.0	3.9	GO:0070537	histone H2A K63-linked deubiquitination(GO:0070537)
1.0	11.6	GO:0043249	erythrocyte maturation(GO:0043249)
1.0	3.8	GO:1903936	cellular response to sodium arsenite(GO:1903936)
1.0	1.9	GO:0071224	cellular response to peptidoglycan(GO:0071224)
0.9	3.7	GO:0006235	dTTP biosynthetic process(GO:0006235) pyrimidine deoxyribonucleoside triphosphate biosynthetic process(GO:0009212)
0.9	8.3	GO:0080009	mRNA methylation(GO:0080009)
0.9	2.7	GO:0097010	eukaryotic translation initiation factor 4F complex assembly(GO:0097010)
0.9	3.6	GO:0090309	positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.9	2.6	GO:0046947	hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
0.8	3.4	GO:0061084	negative regulation of protein refolding(GO:0061084)
0.8	2.5	GO:0060697	positive regulation of phospholipid catabolic process(GO:0060697)
0.8	3.3	GO:1901314	negative regulation of histone ubiquitination(GO:0033183) regulation of histone H2A K63-linked ubiquitination(GO:1901314) negative regulation of histone H2A K63-linked ubiquitination(GO:1901315)
0.8	3.2	GO:1904158	axonemal central apparatus assembly(GO:1904158)
0.8	4.0	GO:0046602	regulation of mitotic centrosome separation(GO:0046602)
0.8	5.4	GO:0098535	de novo centriole assembly(GO:0098535)
0.7	5.9	GO:0060050	positive regulation of protein glycosylation(GO:0060050)
0.7	2.2	GO:0045065	cytotoxic T cell differentiation(GO:0045065)
0.7	8.0	GO:0002291	T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:0002291)
0.7	2.2	GO:1904815	negative regulation of protein localization to chromosome, telomeric region(GO:1904815)
0.7	6.4	GO:0044791	negative regulation of DNA endoreduplication(GO:0032876) modulation by host of viral release from host cell(GO:0044789) positive regulation by host of viral release from host cell(GO:0044791)
0.6	1.9	GO:0033566	gamma-tubulin complex localization(GO:0033566)
0.6	2.4	GO:0046726	positive regulation by virus of viral protein levels in host cell(GO:0046726)
0.6	3.0	GO:0006678	glucosylceramide metabolic process(GO:0006678)
0.6	8.2	GO:0019985	translesion synthesis(GO:0019985)
0.6	2.3	GO:0060355	positive regulation of cell adhesion molecule production(GO:0060355)
0.6	1.1	GO:2000049	positive regulation of cell-cell adhesion mediated by cadherin(GO:2000049)
0.6	10.1	GO:0015937	coenzyme A biosynthetic process(GO:0015937)
0.6	3.4	GO:0070973	protein localization to endoplasmic reticulum exit site(GO:0070973)
0.5	1.6	GO:0030091	protein repair(GO:0030091)
0.5	2.6	GO:0031119	tRNA pseudouridine synthesis(GO:0031119)
0.5	8.6	GO:0043968	histone H2A acetylation(GO:0043968)
0.5	3.5	GO:0033314	mitotic DNA replication checkpoint(GO:0033314)
0.5	5.8	GO:0031274	positive regulation of pseudopodium assembly(GO:0031274)
0.5	1.9	GO:0042091	interleukin-10 biosynthetic process(GO:0042091) regulation of interleukin-10 biosynthetic process(GO:0045074)
0.5	11.6	GO:0060285	cilium or flagellum-dependent cell motility(GO:0001539) cilium-dependent cell motility(GO:0060285)
0.5	2.9	GO:0017196	N-terminal peptidyl-methionine acetylation(GO:0017196)
0.5	6.6	GO:0051601	exocyst localization(GO:0051601)
0.5	0.9	GO:0051105	regulation of DNA ligation(GO:0051105) positive regulation of DNA ligation(GO:0051106)
0.5	5.6	GO:0032464	positive regulation of protein homooligomerization(GO:0032464)
0.5	10.6	GO:0045793	positive regulation of cell size(GO:0045793)
0.4	4.4	GO:0006474	N-terminal protein amino acid acetylation(GO:0006474)
0.4	5.7	GO:0006271	DNA strand elongation involved in DNA replication(GO:0006271)
0.4	2.6	GO:1902035	positive regulation of hematopoietic stem cell proliferation(GO:1902035)
0.4	2.2	GO:0031053	primary miRNA processing(GO:0031053)
0.4	1.7	GO:0015811	L-cystine transport(GO:0015811)
0.4	2.5	GO:0016255	attachment of GPI anchor to protein(GO:0016255)
0.4	5.8	GO:0035404	histone-serine phosphorylation(GO:0035404)
0.4	1.2	GO:0002191	cap-dependent translational initiation(GO:0002191)
0.4	1.6	GO:1990414	replication-born double-strand break repair via sister chromatid exchange(GO:1990414)
0.4	16.9	GO:0045737	positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737)
0.4	4.3	GO:0042996	regulation of Golgi to plasma membrane protein transport(GO:0042996)
0.4	6.5	GO:0006270	DNA replication initiation(GO:0006270)
0.4	8.1	GO:0030889	negative regulation of B cell proliferation(GO:0030889)
0.4	4.0	GO:0002281	macrophage activation involved in immune response(GO:0002281)
0.4	1.8	GO:0045629	negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.3	1.0	GO:0046380	N-acetylglucosamine biosynthetic process(GO:0006045) N-acetylneuraminate biosynthetic process(GO:0046380)
0.3	2.4	GO:0010735	positive regulation of transcription via serum response element binding(GO:0010735)
0.3	8.5	GO:0070932	histone H3 deacetylation(GO:0070932)
0.3	6.4	GO:0048026	positive regulation of mRNA splicing, via spliceosome(GO:0048026)
0.3	1.6	GO:0009181	purine nucleoside diphosphate catabolic process(GO:0009137) purine ribonucleoside diphosphate catabolic process(GO:0009181)
0.3	4.6	GO:0032793	positive regulation of CREB transcription factor activity(GO:0032793)
0.3	1.0	GO:1902499	positive regulation of protein autoubiquitination(GO:1902499) regulation of peroxidase activity(GO:2000468)
0.3	3.9	GO:1900363	regulation of mRNA polyadenylation(GO:1900363)
0.3	8.4	GO:0007099	centriole replication(GO:0007099)
0.3	16.9	GO:0035307	positive regulation of protein dephosphorylation(GO:0035307)
0.3	5.0	GO:0003417	growth plate cartilage development(GO:0003417)
0.3	2.5	GO:1900264	regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264)
0.3	14.0	GO:0010501	RNA secondary structure unwinding(GO:0010501)
0.3	4.7	GO:0010642	negative regulation of platelet-derived growth factor receptor signaling pathway(GO:0010642) inositol trisphosphate metabolic process(GO:0032957)
0.3	1.5	GO:0043570	maintenance of DNA repeat elements(GO:0043570)
0.3	2.5	GO:0060700	regulation of ribonuclease activity(GO:0060700)
0.3	2.8	GO:0061158	3'-UTR-mediated mRNA destabilization(GO:0061158)
0.3	2.4	GO:0051533	positive regulation of NFAT protein import into nucleus(GO:0051533)
0.3	4.5	GO:0048368	lateral mesoderm development(GO:0048368)
0.3	0.5	GO:1901563	cellular response to camptothecin(GO:0072757) response to camptothecin(GO:1901563)
0.3	1.0	GO:1904378	maintenance of unfolded protein(GO:0036506) maintenance of unfolded protein involved in ERAD pathway(GO:1904378)
0.3	3.0	GO:0060484	lung-associated mesenchyme development(GO:0060484)
0.2	2.0	GO:0060120	auditory receptor cell fate commitment(GO:0009912) inner ear receptor cell fate commitment(GO:0060120)
0.2	2.3	GO:0046784	viral mRNA export from host cell nucleus(GO:0046784)
0.2	7.0	GO:0035428	hexose transmembrane transport(GO:0035428) glucose transmembrane transport(GO:1904659)
0.2	0.4	GO:0010994	regulation of ubiquitin homeostasis(GO:0010993) free ubiquitin chain polymerization(GO:0010994)
0.2	5.5	GO:0070979	protein K11-linked ubiquitination(GO:0070979)
0.2	8.4	GO:0000413	protein peptidyl-prolyl isomerization(GO:0000413)
0.2	2.0	GO:0097240	meiotic telomere tethering at nuclear periphery(GO:0044821) meiotic attachment of telomere to nuclear envelope(GO:0070197) chromosome attachment to the nuclear envelope(GO:0097240)
0.2	5.2	GO:0034723	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.2	1.6	GO:0070345	negative regulation of fat cell proliferation(GO:0070345)
0.2	0.6	GO:0046606	negative regulation of centrosome duplication(GO:0010826) negative regulation of centrosome cycle(GO:0046606)
0.2	1.3	GO:0009405	pathogenesis(GO:0009405)
0.2	0.5	GO:0043324	eye pigment metabolic process(GO:0042441) pigment metabolic process involved in developmental pigmentation(GO:0043324) pigment metabolic process involved in pigmentation(GO:0043474) rhodopsin metabolic process(GO:0046154)
0.2	3.4	GO:0070831	basement membrane assembly(GO:0070831)
0.2	8.2	GO:0002474	antigen processing and presentation of peptide antigen via MHC class I(GO:0002474)
0.2	1.5	GO:2000234	positive regulation of ribosome biogenesis(GO:0090070) positive regulation of rRNA processing(GO:2000234)
0.2	1.4	GO:0007021	tubulin complex assembly(GO:0007021)
0.2	1.2	GO:0032927	positive regulation of activin receptor signaling pathway(GO:0032927)
0.2	6.1	GO:0048741	skeletal muscle fiber development(GO:0048741)
0.2	2.5	GO:0071157	negative regulation of cell cycle arrest(GO:0071157)
0.2	3.2	GO:0006298	mismatch repair(GO:0006298)
0.1	1.2	GO:0032462	regulation of protein homooligomerization(GO:0032462)
0.1	1.0	GO:0061450	trophoblast cell migration(GO:0061450)
0.1	3.0	GO:0034643	establishment of mitochondrion localization, microtubule-mediated(GO:0034643) mitochondrion transport along microtubule(GO:0047497)
0.1	1.4	GO:0000722	telomere maintenance via recombination(GO:0000722)
0.1	10.1	GO:0051028	mRNA transport(GO:0051028)
0.1	6.6	GO:0035082	axoneme assembly(GO:0035082)
0.1	2.9	GO:0043153	entrainment of circadian clock by photoperiod(GO:0043153)
0.1	6.3	GO:0043550	regulation of lipid kinase activity(GO:0043550)
0.1	2.7	GO:0032012	regulation of ARF protein signal transduction(GO:0032012)
0.1	3.7	GO:0009303	rRNA transcription(GO:0009303)
0.1	5.0	GO:0032648	regulation of interferon-beta production(GO:0032648)
0.1	1.3	GO:0007076	mitotic chromosome condensation(GO:0007076)
0.1	0.8	GO:0051013	microtubule severing(GO:0051013)
0.1	2.6	GO:0048025	negative regulation of mRNA splicing, via spliceosome(GO:0048025)
0.1	6.8	GO:0035914	skeletal muscle cell differentiation(GO:0035914)
0.1	4.3	GO:0007019	microtubule depolymerization(GO:0007019)
0.1	5.0	GO:0030490	maturation of SSU-rRNA(GO:0030490)
0.1	3.3	GO:0016925	protein sumoylation(GO:0016925)
0.1	0.7	GO:1900246	positive regulation of RIG-I signaling pathway(GO:1900246)
0.1	13.5	GO:0000082	G1/S transition of mitotic cell cycle(GO:0000082)
0.1	0.3	GO:0044208	'de novo' AMP biosynthetic process(GO:0044208)
0.1	3.5	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.1	3.2	GO:0030517	negative regulation of axon extension(GO:0030517)
0.1	1.0	GO:0000185	activation of MAPKKK activity(GO:0000185)
0.1	2.8	GO:0001578	microtubule bundle formation(GO:0001578)
0.1	0.3	GO:0002536	respiratory burst involved in inflammatory response(GO:0002536)
0.1	1.3	GO:0006622	protein targeting to lysosome(GO:0006622)
0.1	0.8	GO:0070995	NADPH oxidation(GO:0070995)
0.1	0.5	GO:0006362	transcription elongation from RNA polymerase I promoter(GO:0006362)
0.1	0.2	GO:1903003	positive regulation of protein deubiquitination(GO:1903003)
0.1	5.1	GO:0033209	tumor necrosis factor-mediated signaling pathway(GO:0033209)
0.1	0.8	GO:1900017	positive regulation of cytokine production involved in inflammatory response(GO:1900017)
0.1	4.3	GO:0006414	translational elongation(GO:0006414)
0.1	0.4	GO:1903608	protein localization to cytoplasmic stress granule(GO:1903608)
0.1	1.1	GO:0046457	prostaglandin biosynthetic process(GO:0001516) prostanoid biosynthetic process(GO:0046457)
0.1	0.1	GO:0001998	angiotensin mediated vasoconstriction involved in regulation of systemic arterial blood pressure(GO:0001998) beta selection(GO:0043366) regulation of modification of synaptic structure(GO:1905244)
0.1	3.3	GO:0034698	response to gonadotropin(GO:0034698)
0.1	4.3	GO:0050729	positive regulation of inflammatory response(GO:0050729)
0.1	0.8	GO:0042407	cristae formation(GO:0042407)
0.1	1.6	GO:0006958	complement activation, classical pathway(GO:0006958)
0.1	0.6	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.0	2.7	GO:0071806	protein transmembrane transport(GO:0071806)
0.0	0.3	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0	0.5	GO:0042492	gamma-delta T cell differentiation(GO:0042492)
0.0	6.0	GO:0006302	double-strand break repair(GO:0006302)
0.0	0.6	GO:0005513	detection of calcium ion(GO:0005513)
0.0	1.6	GO:0006493	protein O-linked glycosylation(GO:0006493)
0.0	0.4	GO:0019321	pentose metabolic process(GO:0019321)
0.0	0.6	GO:0021535	cell migration in hindbrain(GO:0021535)
0.0	7.3	GO:0046777	protein autophosphorylation(GO:0046777)
0.0	0.8	GO:0070306	lens fiber cell differentiation(GO:0070306)
0.0	3.6	GO:0007179	transforming growth factor beta receptor signaling pathway(GO:0007179)
0.0	4.1	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156)
0.0	1.1	GO:0001825	blastocyst formation(GO:0001825)
0.0	0.8	GO:0043507	positive regulation of JUN kinase activity(GO:0043507)
0.0	0.3	GO:0035855	megakaryocyte development(GO:0035855)
0.0	0.8	GO:0000186	activation of MAPKK activity(GO:0000186)
0.0	3.0	GO:0045787	positive regulation of cell cycle(GO:0045787)
0.0	2.8	GO:0030198	extracellular matrix organization(GO:0030198)
0.0	0.2	GO:0034498	early endosome to Golgi transport(GO:0034498)
0.0	0.9	GO:0006334	nucleosome assembly(GO:0006334)
0.0	0.5	GO:0048488	synaptic vesicle endocytosis(GO:0048488)
0.0	4.5	GO:0048232	spermatogenesis(GO:0007283) male gamete generation(GO:0048232)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.4	13.1	GO:1990907	beta-catenin-TCF complex(GO:1990907)
2.8	13.9	GO:0000942	condensed nuclear chromosome outer kinetochore(GO:0000942)
2.6	7.8	GO:1990423	RZZ complex(GO:1990423)
2.6	7.8	GO:0005656	nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
2.4	11.9	GO:0031465	Cul4B-RING E3 ubiquitin ligase complex(GO:0031465)
2.4	14.2	GO:0032133	chromosome passenger complex(GO:0032133)
1.7	8.3	GO:0098536	deuterosome(GO:0098536)
1.6	8.1	GO:0002189	ribose phosphate diphosphokinase complex(GO:0002189)
1.5	4.5	GO:0071149	TEAD-2-YAP complex(GO:0071149)
1.4	8.3	GO:0036396	MIS complex(GO:0036396)
1.4	14.9	GO:0002177	manchette(GO:0002177)
1.3	3.8	GO:1990826	nucleoplasmic periphery of the nuclear pore complex(GO:1990826)
1.0	7.3	GO:0031415	NatA complex(GO:0031415)
1.0	11.3	GO:0042555	MCM complex(GO:0042555)
1.0	4.9	GO:0046696	lipopolysaccharide receptor complex(GO:0046696)
1.0	4.8	GO:0034455	t-UTP complex(GO:0034455)
0.9	6.4	GO:0034991	nuclear meiotic cohesin complex(GO:0034991)
0.9	10.1	GO:0034663	endoplasmic reticulum chaperone complex(GO:0034663)
0.9	2.7	GO:0005853	eukaryotic translation elongation factor 1 complex(GO:0005853)
0.9	11.7	GO:0005652	nuclear lamina(GO:0005652)
0.8	3.4	GO:0005607	laminin-2 complex(GO:0005607)
0.8	3.2	GO:0002079	inner acrosomal membrane(GO:0002079)
0.7	4.3	GO:1990111	spermatoproteasome complex(GO:1990111)
0.6	3.8	GO:0000778	condensed nuclear chromosome kinetochore(GO:0000778)
0.6	1.9	GO:0008275	gamma-tubulin small complex(GO:0008275) interphase microtubule organizing center(GO:0031021)
0.6	3.7	GO:0005672	transcription factor TFIIA complex(GO:0005672)
0.6	3.9	GO:0090571	RNA polymerase II transcription repressor complex(GO:0090571)
0.6	2.8	GO:0044530	supraspliceosomal complex(GO:0044530)
0.5	10.8	GO:0001673	male germ cell nucleus(GO:0001673)
0.5	1.5	GO:0032798	Swi5-Sfr1 complex(GO:0032798)
0.5	1.5	GO:0032301	MutSalpha complex(GO:0032301)
0.5	4.1	GO:0070187	telosome(GO:0070187)
0.5	3.2	GO:0042382	paraspeckles(GO:0042382)
0.4	40.3	GO:0000786	nucleosome(GO:0000786)
0.4	2.5	GO:0042765	GPI-anchor transamidase complex(GO:0042765)
0.4	19.4	GO:0000307	cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.4	27.4	GO:0005643	nuclear pore(GO:0005643)
0.4	2.7	GO:0016281	eukaryotic translation initiation factor 4F complex(GO:0016281)
0.4	3.9	GO:0070531	BRCA1-A complex(GO:0070531)
0.4	8.6	GO:0043189	NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.3	7.9	GO:0005719	nuclear euchromatin(GO:0005719)
0.3	12.3	GO:0008305	integrin complex(GO:0008305)
0.3	2.0	GO:0042405	nuclear inclusion body(GO:0042405)
0.3	5.8	GO:0031588	nucleotide-activated protein kinase complex(GO:0031588)
0.3	1.5	GO:0043625	delta DNA polymerase complex(GO:0043625)
0.3	1.2	GO:0005956	protein kinase CK2 complex(GO:0005956)
0.3	1.4	GO:0035061	interchromatin granule(GO:0035061)
0.3	2.5	GO:0031390	Ctf18 RFC-like complex(GO:0031390)
0.3	6.9	GO:0000145	exocyst(GO:0000145)
0.3	1.6	GO:0071010	U2-type prespliceosome(GO:0071004) prespliceosome(GO:0071010)
0.3	1.0	GO:0072379	BAT3 complex(GO:0071818) ER membrane insertion complex(GO:0072379)
0.2	1.0	GO:0097487	multivesicular body, internal vesicle(GO:0097487)
0.2	1.2	GO:0070765	gamma-secretase complex(GO:0070765)
0.2	12.9	GO:0015030	Cajal body(GO:0015030)
0.2	2.3	GO:0000347	THO complex(GO:0000347) THO complex part of transcription export complex(GO:0000445)
0.2	10.0	GO:0016235	aggresome(GO:0016235)
0.2	2.6	GO:0005736	DNA-directed RNA polymerase I complex(GO:0005736)
0.2	4.8	GO:0080008	Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.2	2.5	GO:0005666	DNA-directed RNA polymerase III complex(GO:0005666)
0.2	3.8	GO:0019013	U1 snRNP(GO:0005685) viral nucleocapsid(GO:0019013)
0.2	13.4	GO:0022627	cytosolic small ribosomal subunit(GO:0022627)
0.2	4.3	GO:0098563	integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563)
0.2	1.1	GO:0002142	stereocilia ankle link complex(GO:0002142)
0.2	8.1	GO:0017053	transcriptional repressor complex(GO:0017053)
0.2	3.2	GO:0071011	precatalytic spliceosome(GO:0071011)
0.2	1.8	GO:0030688	preribosome, small subunit precursor(GO:0030688)
0.2	6.8	GO:0000118	histone deacetylase complex(GO:0000118)
0.2	2.7	GO:0000930	gamma-tubulin complex(GO:0000930)
0.2	16.9	GO:0005814	centriole(GO:0005814)
0.2	12.2	GO:0000784	nuclear chromosome, telomeric region(GO:0000784)
0.2	1.2	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1	1.0	GO:0070449	elongin complex(GO:0070449)
0.1	3.5	GO:0000781	chromosome, telomeric region(GO:0000781)
0.1	3.4	GO:0016234	inclusion body(GO:0016234)
0.1	0.8	GO:0061617	MICOS complex(GO:0061617)
0.1	1.9	GO:0000242	pericentriolar material(GO:0000242)
0.1	4.8	GO:0016592	mediator complex(GO:0016592)
0.1	4.9	GO:0045171	intercellular bridge(GO:0045171)
0.1	28.9	GO:0000790	nuclear chromatin(GO:0000790)
0.1	2.2	GO:1902555	endoribonuclease complex(GO:1902555)
0.1	1.3	GO:0044754	autolysosome(GO:0044754)
0.1	0.5	GO:0008622	epsilon DNA polymerase complex(GO:0008622)
0.1	0.6	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1	2.6	GO:0032588	trans-Golgi network membrane(GO:0032588)
0.1	1.1	GO:0005689	U12-type spliceosomal complex(GO:0005689)
0.1	2.8	GO:0008180	COP9 signalosome(GO:0008180)
0.1	6.5	GO:0034399	nuclear periphery(GO:0034399)
0.1	0.4	GO:0097165	nuclear stress granule(GO:0097165)
0.1	7.0	GO:0005681	spliceosomal complex(GO:0005681)
0.1	18.6	GO:0043235	receptor complex(GO:0043235)
0.1	0.5	GO:0000439	core TFIIH complex(GO:0000439)
0.1	0.2	GO:0061574	ASAP complex(GO:0061574)
0.1	0.8	GO:0044224	juxtaparanode region of axon(GO:0044224)
0.1	1.6	GO:0005605	basal lamina(GO:0005605)
0.1	18.4	GO:0009897	external side of plasma membrane(GO:0009897)
0.1	3.9	GO:0005581	collagen trimer(GO:0005581)
0.1	0.8	GO:0033391	chromatoid body(GO:0033391)
0.0	0.1	GO:0000811	GINS complex(GO:0000811)
0.0	5.6	GO:0001650	fibrillar center(GO:0001650)
0.0	1.6	GO:0033017	sarcoplasmic reticulum membrane(GO:0033017)
0.0	4.4	GO:0030175	filopodium(GO:0030175)
0.0	0.5	GO:0044292	dendrite terminus(GO:0044292)
0.0	0.4	GO:0017119	Golgi transport complex(GO:0017119)
0.0	2.9	GO:0097014	axoneme(GO:0005930) ciliary plasm(GO:0097014)
0.0	7.6	GO:0005819	spindle(GO:0005819)
0.0	2.9	GO:0005913	cell-cell adherens junction(GO:0005913)
0.0	4.9	GO:0008021	synaptic vesicle(GO:0008021)
0.0	1.3	GO:0016605	PML body(GO:0016605)
0.0	0.7	GO:0010494	cytoplasmic stress granule(GO:0010494)
0.0	5.0	GO:0016323	basolateral plasma membrane(GO:0016323)
0.0	1.7	GO:0000932	cytoplasmic mRNA processing body(GO:0000932)
0.0	0.5	GO:0032154	cleavage furrow(GO:0032154) cell surface furrow(GO:0097610)
0.0	0.2	GO:0030008	TRAPP complex(GO:0030008)
0.0	5.1	GO:0005578	proteinaceous extracellular matrix(GO:0005578)
0.0	1.5	GO:0005923	bicellular tight junction(GO:0005923)
0.0	1.4	GO:0044306	neuron projection terminus(GO:0044306)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.0	16.1	GO:0061575	cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
3.5	13.9	GO:0044378	non-sequence-specific DNA binding, bending(GO:0044378)
2.8	13.9	GO:0010997	anaphase-promoting complex binding(GO:0010997)
2.3	6.9	GO:0008481	sphinganine kinase activity(GO:0008481)
2.1	6.2	GO:0070976	TIR domain binding(GO:0070976)
2.0	10.1	GO:0004140	dephospho-CoA kinase activity(GO:0004140)
1.9	5.7	GO:0003828	alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828)
1.5	12.3	GO:0035184	histone threonine kinase activity(GO:0035184)
1.5	4.6	GO:0016520	growth hormone-releasing hormone receptor activity(GO:0016520)
1.5	7.5	GO:0004523	RNA-DNA hybrid ribonuclease activity(GO:0004523)
1.5	11.9	GO:0004749	ribose phosphate diphosphokinase activity(GO:0004749)
1.5	5.9	GO:0004948	calcitonin receptor activity(GO:0004948)
1.5	1.5	GO:0032142	single guanine insertion binding(GO:0032142)
1.4	5.4	GO:0004052	arachidonate 12-lipoxygenase activity(GO:0004052)
1.3	20.0	GO:0035174	histone serine kinase activity(GO:0035174)
1.3	13.1	GO:0030284	estrogen receptor activity(GO:0030284) armadillo repeat domain binding(GO:0070016)
1.3	6.4	GO:0036033	mediator complex binding(GO:0036033)
1.3	5.1	GO:0070883	pre-miRNA binding(GO:0070883)
1.2	8.4	GO:0004767	sphingomyelin phosphodiesterase activity(GO:0004767)
1.2	3.6	GO:0035851	Krueppel-associated box domain binding(GO:0035851)
1.0	8.4	GO:0051525	NFAT protein binding(GO:0051525)
1.0	14.3	GO:0003688	DNA replication origin binding(GO:0003688)
1.0	3.0	GO:0034739	histone deacetylase activity (H4-K16 specific)(GO:0034739)
1.0	3.9	GO:0035614	snRNA stem-loop binding(GO:0035614)
1.0	3.8	GO:0019237	centromeric DNA binding(GO:0019237)
0.9	5.6	GO:0015173	aromatic amino acid transmembrane transporter activity(GO:0015173)
0.9	6.5	GO:0033592	RNA strand annealing activity(GO:0033592)
0.9	2.6	GO:0033823	procollagen-lysine 5-dioxygenase activity(GO:0008475) procollagen glucosyltransferase activity(GO:0033823)
0.9	4.4	GO:0001010	transcription factor activity, sequence-specific DNA binding transcription factor recruiting(GO:0001010)
0.8	5.0	GO:0005499	vitamin D binding(GO:0005499)
0.7	6.6	GO:0008525	phosphatidylcholine transporter activity(GO:0008525)
0.7	2.2	GO:0032296	ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.7	7.0	GO:0005412	glucose:sodium symporter activity(GO:0005412)
0.7	4.7	GO:0050700	CARD domain binding(GO:0050700)
0.7	7.3	GO:0016783	sulfurtransferase activity(GO:0016783)
0.6	6.0	GO:0003689	DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.6	18.6	GO:0008139	nuclear localization sequence binding(GO:0008139)
0.5	5.4	GO:0005487	nucleocytoplasmic transporter activity(GO:0005487)
0.5	4.7	GO:0004445	inositol-polyphosphate 5-phosphatase activity(GO:0004445)
0.5	7.3	GO:0004596	peptide alpha-N-acetyltransferase activity(GO:0004596)
0.5	2.0	GO:0001042	RNA polymerase I core binding(GO:0001042)
0.4	1.7	GO:0015184	L-alanine transmembrane transporter activity(GO:0015180) L-cystine transmembrane transporter activity(GO:0015184) alanine transmembrane transporter activity(GO:0022858)
0.4	2.5	GO:0003923	GPI-anchor transamidase activity(GO:0003923) GPI anchor binding(GO:0034235)
0.4	5.9	GO:0004697	protein kinase C activity(GO:0004697)
0.4	1.6	GO:0033743	peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.4	10.1	GO:0008536	Ran GTPase binding(GO:0008536)
0.4	3.5	GO:0004526	ribonuclease P activity(GO:0004526)
0.3	5.6	GO:0051400	BH domain binding(GO:0051400)
0.3	1.6	GO:0043262	adenosine-diphosphatase activity(GO:0043262)
0.3	1.0	GO:0034211	GTP-dependent protein kinase activity(GO:0034211)
0.3	4.2	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.3	6.0	GO:0003993	acid phosphatase activity(GO:0003993)
0.3	4.7	GO:0001134	transcription factor activity, transcription factor recruiting(GO:0001134)
0.3	2.2	GO:0071532	ankyrin repeat binding(GO:0071532)
0.3	5.8	GO:0017049	GTP-Rho binding(GO:0017049)
0.3	2.7	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.3	7.7	GO:0042974	retinoic acid receptor binding(GO:0042974)
0.3	1.7	GO:0061578	Lys63-specific deubiquitinase activity(GO:0061578)
0.3	5.3	GO:0070628	proteasome binding(GO:0070628)
0.3	1.1	GO:0047179	platelet-activating factor acetyltransferase activity(GO:0047179)
0.3	6.1	GO:0003746	translation elongation factor activity(GO:0003746)
0.3	2.5	GO:0001730	2'-5'-oligoadenylate synthetase activity(GO:0001730)
0.3	1.6	GO:0009378	four-way junction helicase activity(GO:0009378)
0.3	8.3	GO:1990841	promoter-specific chromatin binding(GO:1990841)
0.3	8.0	GO:0046966	thyroid hormone receptor binding(GO:0046966)
0.3	3.3	GO:0043522	leucine zipper domain binding(GO:0043522)
0.2	17.1	GO:0008186	RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004) RNA-dependent ATPase activity(GO:0008186)
0.2	4.6	GO:0098641	cadherin binding involved in cell-cell adhesion(GO:0098641)
0.2	5.1	GO:0005035	tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.2	20.6	GO:0017048	Rho GTPase binding(GO:0017048)
0.2	12.7	GO:0008138	protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.2	2.8	GO:0050321	tau-protein kinase activity(GO:0050321)
0.2	3.9	GO:0071617	lysophospholipid acyltransferase activity(GO:0071617)
0.2	5.7	GO:0071837	HMG box domain binding(GO:0071837)
0.2	1.3	GO:0003917	DNA topoisomerase type I activity(GO:0003917)
0.2	1.0	GO:0038132	neuregulin binding(GO:0038132)
0.2	8.2	GO:0042605	peptide antigen binding(GO:0042605)
0.2	8.4	GO:0003755	peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.2	22.0	GO:0005178	integrin binding(GO:0005178)
0.2	2.0	GO:1990405	protein antigen binding(GO:1990405)
0.2	1.0	GO:0008349	MAP kinase kinase kinase kinase activity(GO:0008349)
0.2	4.6	GO:0004693	cyclin-dependent protein serine/threonine kinase activity(GO:0004693)
0.2	3.2	GO:0001848	complement binding(GO:0001848)
0.2	2.5	GO:0001056	RNA polymerase III activity(GO:0001056)
0.2	0.6	GO:0015252	hydrogen ion channel activity(GO:0015252)
0.1	1.2	GO:0004035	alkaline phosphatase activity(GO:0004035)
0.1	2.3	GO:0038187	signaling pattern recognition receptor activity(GO:0008329) pattern recognition receptor activity(GO:0038187)
0.1	7.3	GO:0004715	non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1	1.1	GO:0047498	calcium-dependent phospholipase A2 activity(GO:0047498)
0.1	1.9	GO:0055106	ubiquitin-protein transferase regulator activity(GO:0055106)
0.1	2.5	GO:0030332	cyclin binding(GO:0030332)
0.1	2.7	GO:0005086	ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.1	4.3	GO:0005484	SNAP receptor activity(GO:0005484)
0.1	2.8	GO:0030371	translation repressor activity(GO:0030371)
0.1	2.9	GO:0017025	TBP-class protein binding(GO:0017025)
0.1	1.2	GO:0000339	RNA cap binding(GO:0000339)
0.1	14.9	GO:0003714	transcription corepressor activity(GO:0003714)
0.1	1.5	GO:0043422	protein kinase B binding(GO:0043422)
0.1	2.8	GO:0070273	phosphatidylinositol-4-phosphate binding(GO:0070273)
0.1	0.5	GO:0047696	beta-adrenergic receptor kinase activity(GO:0047696)
0.1	2.5	GO:0031492	nucleosomal DNA binding(GO:0031492)
0.1	2.0	GO:0004709	MAP kinase kinase kinase activity(GO:0004709)
0.1	5.6	GO:0004714	transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1	0.9	GO:0003906	DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.1	7.7	GO:0003697	single-stranded DNA binding(GO:0003697)
0.1	2.0	GO:0003887	DNA-directed DNA polymerase activity(GO:0003887)
0.1	0.3	GO:0016842	amidine-lyase activity(GO:0016842)
0.1	1.8	GO:0043015	gamma-tubulin binding(GO:0043015)
0.1	0.3	GO:0008379	thioredoxin peroxidase activity(GO:0008379)
0.1	1.5	GO:0005070	SH3/SH2 adaptor activity(GO:0005070)
0.1	8.1	GO:0047485	protein N-terminus binding(GO:0047485)
0.1	0.5	GO:0000182	rDNA binding(GO:0000182)
0.1	0.2	GO:0017070	U6 snRNA binding(GO:0017070)
0.1	1.3	GO:0017128	phospholipid scramblase activity(GO:0017128)
0.1	0.8	GO:0008568	microtubule-severing ATPase activity(GO:0008568)
0.1	2.2	GO:0005164	tumor necrosis factor receptor binding(GO:0005164)
0.1	1.0	GO:0032183	SUMO binding(GO:0032183)
0.1	0.2	GO:0005136	interleukin-4 receptor binding(GO:0005136)
0.0	3.4	GO:0051087	chaperone binding(GO:0051087)
0.0	1.5	GO:0030374	ligand-dependent nuclear receptor transcription coactivator activity(GO:0030374)
0.0	1.5	GO:0001105	RNA polymerase II transcription coactivator activity(GO:0001105)
0.0	1.7	GO:0005109	frizzled binding(GO:0005109)
0.0	1.4	GO:0048487	beta-tubulin binding(GO:0048487)
0.0	1.6	GO:0008378	galactosyltransferase activity(GO:0008378)
0.0	1.3	GO:0050699	WW domain binding(GO:0050699)
0.0	1.3	GO:0061631	ubiquitin conjugating enzyme activity(GO:0061631)
0.0	4.4	GO:0017124	SH3 domain binding(GO:0017124)
0.0	0.8	GO:0004033	aldo-keto reductase (NADP) activity(GO:0004033)
0.0	9.9	GO:0003735	structural constituent of ribosome(GO:0003735)
0.0	4.3	GO:0005267	potassium channel activity(GO:0005267)
0.0	4.4	GO:0042393	histone binding(GO:0042393)
0.0	0.8	GO:0031624	ubiquitin conjugating enzyme binding(GO:0031624)
0.0	0.1	GO:0043138	3'-5' DNA helicase activity(GO:0043138)
0.0	2.7	GO:0001047	core promoter binding(GO:0001047)
0.0	4.3	GO:0008017	microtubule binding(GO:0008017)
0.0	1.2	GO:0017022	myosin binding(GO:0017022)
0.0	0.2	GO:0009982	pseudouridine synthase activity(GO:0009982)
0.0	1.6	GO:0044325	ion channel binding(GO:0044325)
0.0	0.6	GO:0030515	snoRNA binding(GO:0030515)
0.0	1.0	GO:0001085	RNA polymerase II transcription factor binding(GO:0001085)
0.0	0.3	GO:0003785	actin monomer binding(GO:0003785)
0.0	0.8	GO:0008565	protein transporter activity(GO:0008565)
0.0	0.5	GO:0005044	scavenger receptor activity(GO:0005044)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.0	47.8	PID FOXM1 PATHWAY	FOXM1 transcription factor network
0.5	14.7	PID NFKAPPAB CANONICAL PATHWAY	Canonical NF-kappaB pathway
0.4	18.6	PID ATM PATHWAY	ATM pathway
0.4	12.3	PID INTEGRIN CS PATHWAY	Integrin family cell surface interactions
0.4	16.6	PID SYNDECAN 4 PATHWAY	Syndecan-4-mediated signaling events
0.4	7.7	PID SMAD2 3PATHWAY	Regulation of cytoplasmic and nuclear SMAD2/3 signaling
0.3	3.4	PID INTEGRIN4 PATHWAY	Alpha6 beta4 integrin-ligand interactions
0.3	4.7	PID EPHA2 FWD PATHWAY	EPHA2 forward signaling
0.3	2.5	SA REG CASCADE OF CYCLIN EXPR	Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.2	10.1	PID RET PATHWAY	Signaling events regulated by Ret tyrosine kinase
0.2	7.7	PID IL2 PI3K PATHWAY	IL2 signaling events mediated by PI3K
0.2	5.1	PID WNT CANONICAL PATHWAY	Canonical Wnt signaling pathway
0.2	2.0	PID TCR RAS PATHWAY	Ras signaling in the CD4+ TCR pathway
0.2	4.0	PID CD40 PATHWAY	CD40/CD40L signaling
0.2	13.1	PID CMYB PATHWAY	C-MYB transcription factor network
0.2	3.7	PID TOLL ENDOGENOUS PATHWAY	Endogenous TLR signaling
0.2	2.7	PID IL2 STAT5 PATHWAY	IL2 signaling events mediated by STAT5
0.2	9.9	PID E2F PATHWAY	E2F transcription factor network
0.2	6.9	PID INTEGRIN3 PATHWAY	Beta3 integrin cell surface interactions
0.2	8.4	PID HES HEY PATHWAY	Notch-mediated HES/HEY network
0.2	9.8	PID HDAC CLASSI PATHWAY	Signaling events mediated by HDAC Class I
0.2	10.4	PID CDC42 PATHWAY	CDC42 signaling events
0.2	2.6	PID ARF6 TRAFFICKING PATHWAY	Arf6 trafficking events
0.2	3.6	PID ECADHERIN KERATINOCYTE PATHWAY	E-cadherin signaling in keratinocytes
0.2	4.5	PID NOTCH PATHWAY	Notch signaling pathway
0.1	2.5	PID MYC PATHWAY	C-MYC pathway
0.1	20.7	NABA ECM AFFILIATED	Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins
0.1	1.2	PID NFKAPPAB ATYPICAL PATHWAY	Atypical NF-kappaB pathway
0.1	2.4	PID RHOA PATHWAY	RhoA signaling pathway
0.1	0.9	PID DNA PK PATHWAY	DNA-PK pathway in nonhomologous end joining
0.1	6.1	PID AR PATHWAY	Coregulation of Androgen receptor activity
0.1	3.5	PID P38 ALPHA BETA DOWNSTREAM PATHWAY	Signaling mediated by p38-alpha and p38-beta
0.1	3.2	PID FANCONI PATHWAY	Fanconi anemia pathway
0.1	1.3	PID LPA4 PATHWAY	LPA4-mediated signaling events
0.1	2.5	PID P53 REGULATION PATHWAY	p53 pathway
0.1	2.0	PID PI3KCI PATHWAY	Class I PI3K signaling events
0.0	0.8	PID AURORA A PATHWAY	Aurora A signaling
0.0	1.1	PID LIS1 PATHWAY	Lissencephaly gene (LIS1) in neuronal migration and development
0.0	1.3	PID TELOMERASE PATHWAY	Regulation of Telomerase
0.0	2.1	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.0	1.8	PID P73PATHWAY	p73 transcription factor network
0.0	1.0	PID TNF PATHWAY	TNF receptor signaling pathway
0.0	4.4	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.0	1.8	PID P53 DOWNSTREAM PATHWAY	Direct p53 effectors
0.0	0.6	PID ECADHERIN STABILIZATION PATHWAY	Stabilization and expansion of the E-cadherin adherens junction
0.0	0.3	PID INSULIN PATHWAY	Insulin Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.6	42.5	REACTOME PACKAGING OF TELOMERE ENDS	Genes involved in Packaging Of Telomere Ends
1.3	14.4	REACTOME UNWINDING OF DNA	Genes involved in Unwinding of DNA
1.1	12.1	REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND	Genes involved in Removal of the Flap Intermediate from the C-strand
1.1	19.6	REACTOME OTHER SEMAPHORIN INTERACTIONS	Genes involved in Other semaphorin interactions
1.0	16.4	REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION	Genes involved in Cyclin A/B1 associated events during G2/M transition
0.8	22.4	REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY	Genes involved in NEP/NS2 Interacts with the Cellular Export Machinery
0.8	9.9	REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS	Genes involved in Tandem pore domain potassium channels
0.7	10.5	REACTOME MTORC1 MEDIATED SIGNALLING	Genes involved in mTORC1-mediated signalling
0.5	4.4	REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN	Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin
0.5	7.0	REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP	Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)
0.4	5.6	REACTOME P75NTR RECRUITS SIGNALLING COMPLEXES	Genes involved in p75NTR recruits signalling complexes
0.4	8.4	REACTOME ACTIVATION OF ATR IN RESPONSE TO REPLICATION STRESS	Genes involved in Activation of ATR in response to replication stress
0.4	8.3	REACTOME G0 AND EARLY G1	Genes involved in G0 and Early G1
0.4	1.6	REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX	Genes involved in CDC6 association with the ORC:origin complex
0.3	9.9	REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS	Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.3	2.7	REACTOME ER PHAGOSOME PATHWAY	Genes involved in ER-Phagosome pathway
0.3	11.6	REACTOME NCAM1 INTERACTIONS	Genes involved in NCAM1 interactions
0.3	4.3	REACTOME ACYL CHAIN REMODELLING OF PS	Genes involved in Acyl chain remodelling of PS
0.2	3.2	REACTOME REGULATION OF COMPLEMENT CASCADE	Genes involved in Regulation of Complement cascade
0.2	6.4	REACTOME MEIOTIC SYNAPSIS	Genes involved in Meiotic Synapsis
0.2	1.3	REACTOME OLFACTORY SIGNALING PATHWAY	Genes involved in Olfactory Signaling Pathway
0.2	2.0	REACTOME RECEPTOR LIGAND BINDING INITIATES THE SECOND PROTEOLYTIC CLEAVAGE OF NOTCH RECEPTOR	Genes involved in Receptor-ligand binding initiates the second proteolytic cleavage of Notch receptor
0.2	2.8	REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION	Genes involved in activated TAK1 mediates p38 MAPK activation
0.2	4.3	REACTOME DESTABILIZATION OF MRNA BY TRISTETRAPROLIN TTP	Genes involved in Destabilization of mRNA by Tristetraprolin (TTP)
0.2	8.0	REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL	Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
0.2	4.9	REACTOME DOWNSTREAM TCR SIGNALING	Genes involved in Downstream TCR signaling
0.2	7.3	REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE	Genes involved in Amino acid transport across the plasma membrane
0.2	2.2	REACTOME MICRORNA MIRNA BIOGENESIS	Genes involved in MicroRNA (miRNA) Biogenesis
0.2	8.9	REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX	Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.2	4.7	REACTOME IL RECEPTOR SHC SIGNALING	Genes involved in Interleukin receptor SHC signaling
0.2	8.9	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.2	4.5	REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.2	10.8	REACTOME APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1	Genes involved in APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
0.2	4.5	REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 3 PROMOTER	Genes involved in RNA Polymerase III Transcription Initiation From Type 3 Promoter
0.2	3.9	REACTOME METABOLISM OF NON CODING RNA	Genes involved in Metabolism of non-coding RNA
0.1	1.5	REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS	Genes involved in Signal regulatory protein (SIRP) family interactions
0.1	5.7	REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES	Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1	2.8	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.1	11.5	REACTOME MRNA SPLICING	Genes involved in mRNA Splicing
0.1	2.0	REACTOME CD28 DEPENDENT PI3K AKT SIGNALING	Genes involved in CD28 dependent PI3K/Akt signaling
0.1	1.4	REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY	Genes involved in Post-chaperonin tubulin folding pathway
0.1	6.9	REACTOME SIGNALING BY EGFR IN CANCER	Genes involved in Signaling by EGFR in Cancer
0.1	3.9	REACTOME INTEGRIN CELL SURFACE INTERACTIONS	Genes involved in Integrin cell surface interactions
0.1	1.2	REACTOME BASIGIN INTERACTIONS	Genes involved in Basigin interactions
0.1	2.6	REACTOME COLLAGEN FORMATION	Genes involved in Collagen formation
0.1	5.9	REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS	Genes involved in Class B/2 (Secretin family receptors)
0.0	7.8	REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION	Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0	1.3	REACTOME MEIOSIS	Genes involved in Meiosis
0.0	3.4	REACTOME CELL JUNCTION ORGANIZATION	Genes involved in Cell junction organization
0.0	0.1	REACTOME G BETA GAMMA SIGNALLING THROUGH PI3KGAMMA	Genes involved in G beta:gamma signalling through PI3Kgamma
0.0	0.3	REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS	Genes involved in Purine ribonucleoside monophosphate biosynthesis
0.0	0.8	REACTOME VOLTAGE GATED POTASSIUM CHANNELS	Genes involved in Voltage gated Potassium channels
0.0	0.6	REACTOME POTASSIUM CHANNELS	Genes involved in Potassium Channels
0.0	0.3	REACTOME INSULIN SYNTHESIS AND PROCESSING	Genes involved in Insulin Synthesis and Processing
0.0	2.3	REACTOME PEPTIDE LIGAND BINDING RECEPTORS	Genes involved in Peptide ligand-binding receptors
0.0	1.2	REACTOME TRANSLATION	Genes involved in Translation