GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Lef1 Links NCBI RGD Ensembl	ENSRNOG00000010121	lymphoid enhancer binding factor 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Lef1	rn6_v1_chr2_+_236233239_236233239	-0.07	2.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr3_-_51643140 Show fit	28.77	ENSRNOT00000006646	Scn3a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 3
chr7_-_98098268 Show fit	23.74	ENSRNOT00000010361	Fbxo32 Links NCBI RGD Ensembl Show fit	F-box protein 32
chr16_-_39476025 Show fit	16.51	ENSRNOT00000014312	Gpm6a Links NCBI RGD Ensembl Show fit	glycoprotein m6a
chr9_-_85243001 Show fit	15.44	ENSRNOT00000020219	Scg2 Links NCBI RGD Ensembl Show fit	secretogranin II
chr8_+_49418965 Show fit	15.40	ENSRNOT00000021819	Scn2b Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel beta subunit 2
chr8_-_14880644 Show fit	15.39	ENSRNOT00000015977	Fat3 Links NCBI RGD Ensembl Show fit	FAT atypical cadherin 3
chr14_+_66598259 Show fit	15.16	ENSRNOT00000049743	Kcnip4 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 4
chr10_-_27179254 Show fit	14.69	ENSRNOT00000004619	Gabrg2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor gamma 2 subunit
chr3_+_131351587 Show fit	14.38	ENSRNOT00000010835	Btbd3 Links NCBI RGD Ensembl Show fit	BTB domain containing 3
chr11_+_9642365 Show fit	14.21	ENSRNOT00000087080 ENSRNOT00000042384	Robo1 Links NCBI RGD Ensembl Show fit	roundabout guidance receptor 1
chr4_+_142453013 Show fit	14.20	ENSRNOT00000056573	AABR07061755.1 Links NCBI RGD Ensembl Show fit
chr19_-_19509087 Show fit	13.61	ENSRNOT00000019301	Nkd1 Links NCBI RGD Ensembl Show fit	naked cuticle homolog 1
chr10_-_27179900 Show fit	13.34	ENSRNOT00000082445	Gabrg2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor gamma 2 subunit
chr4_+_172942020 Show fit	12.30	ENSRNOT00000072450	Lmo3 Links NCBI RGD Ensembl Show fit	LIM domain only 3
chrX_-_32095867 Show fit	12.12	ENSRNOT00000049947 ENSRNOT00000080730	Ace2 Links NCBI RGD Ensembl Show fit	angiotensin I converting enzyme 2
chr13_-_91872954 Show fit	11.99	ENSRNOT00000004613 ENSRNOT00000079263	Cadm3 Links NCBI RGD Ensembl Show fit	cell adhesion molecule 3
chr13_-_72063347 Show fit	11.88	ENSRNOT00000090544 ENSRNOT00000003869	Cacna1e Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 E
chr1_+_59156251 Show fit	11.63	ENSRNOT00000017442	Lix1 Links NCBI RGD Ensembl Show fit	limb and CNS expressed 1
chr8_+_128824508 Show fit	10.93	ENSRNOT00000025343	Mobp Links NCBI RGD Ensembl Show fit	myelin-associated oligodendrocyte basic protein
chr5_-_7874909 Show fit	10.57	ENSRNOT00000064774	Prex2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr8_-_84506328 Show fit	10.48	ENSRNOT00000064754	Mlip Links NCBI RGD Ensembl Show fit	muscular LMNA-interacting protein
chr17_+_47721977 Show fit	10.47	ENSRNOT00000080800	LOC100910792 Links NCBI RGD Ensembl Show fit	amphiphysin-like
chr1_+_151439409 Show fit	10.34	ENSRNOT00000022060 ENSRNOT00000050639	Grm5 Links NCBI RGD Ensembl Show fit	glutamate metabotropic receptor 5
chr2_-_220535751 Show fit	10.17	ENSRNOT00000089082	Palmd Links NCBI RGD Ensembl Show fit	palmdelphin
chrX_-_68562301 Show fit	10.10	ENSRNOT00000076720	Ophn1 Links NCBI RGD Ensembl Show fit	oligophrenin 1
chr3_+_154395187 Show fit	10.08	ENSRNOT00000050810	Vstm2l Links NCBI RGD Ensembl Show fit	V-set and transmembrane domain containing 2 like
chr4_+_99618622 Show fit	10.04	ENSRNOT00000064772	Reep1 Links NCBI RGD Ensembl Show fit	receptor accessory protein 1
chr15_+_52767442 Show fit	9.94	ENSRNOT00000014441	LOC108348161 Links NCBI RGD Ensembl Show fit	phytanoyl-CoA hydroxylase-interacting protein
chr5_+_104362971 Show fit	9.93	ENSRNOT00000058520	Adamtsl1 Links NCBI RGD Ensembl Show fit	ADAMTS-like 1
chrX_+_156655960 Show fit	9.61	ENSRNOT00000085723	Mecp2 Links NCBI RGD Ensembl Show fit	methyl CpG binding protein 2
chr13_-_107831014 Show fit	9.41	ENSRNOT00000003684	Kcnk2 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 2
chr6_-_147172022 Show fit	9.18	ENSRNOT00000080675	Itgb8 Links NCBI RGD Ensembl Show fit	integrin subunit beta 8
chr8_+_79606789 Show fit	9.14	ENSRNOT00000087114	Pygo1 Links NCBI RGD Ensembl Show fit	pygopus family PHD finger 1
chr6_+_147876237 Show fit	9.05	ENSRNOT00000056649	Tmem196 Links NCBI RGD Ensembl Show fit	transmembrane protein 196
chr2_-_212852870 Show fit	9.00	ENSRNOT00000066218	Ntng1 Links NCBI RGD Ensembl Show fit	netrin G1
chr20_-_27208041 Show fit	8.76	ENSRNOT00000084720	Rufy2 Links NCBI RGD Ensembl Show fit	RUN and FYVE domain containing 2
chr2_+_144861455 Show fit	8.72	ENSRNOT00000093284 ENSRNOT00000019748 ENSRNOT00000072110	Dclk1 Links NCBI RGD Ensembl Show fit	doublecortin-like kinase 1
chr15_+_52148379 Show fit	8.69	ENSRNOT00000074912	Phyhip Links NCBI RGD Ensembl Show fit	phytanoyl-CoA 2-hydroxylase interacting protein
chr5_-_34813116 Show fit	8.68	ENSRNOT00000017479	Nkain3 Links NCBI RGD Ensembl Show fit	Sodium/potassium transporting ATPase interacting 3
chr6_-_147172813 Show fit	8.55	ENSRNOT00000066545	Itgb8 Links NCBI RGD Ensembl Show fit	integrin subunit beta 8
chr8_-_73164620 Show fit	8.33	ENSRNOT00000031988	Tln2 Links NCBI RGD Ensembl Show fit	talin 2
chr2_-_57935334 Show fit	8.30	ENSRNOT00000022319 ENSRNOT00000085599 ENSRNOT00000077790 ENSRNOT00000035821	Slc1a3 Links NCBI RGD Ensembl Show fit	solute carrier family 1 member 3
chr8_+_49676540 Show fit	8.27	ENSRNOT00000022032 ENSRNOT00000082205	Fxyd6 Links NCBI RGD Ensembl Show fit	FXYD domain-containing ion transport regulator 6
chr2_-_147693082 Show fit	8.16	ENSRNOT00000022507	Wwtr1 Links NCBI RGD Ensembl Show fit	WW domain containing transcription regulator 1
chr6_+_147876557 Show fit	8.15	ENSRNOT00000080090	Tmem196 Links NCBI RGD Ensembl Show fit	transmembrane protein 196
chr7_-_93826665 Show fit	7.84	ENSRNOT00000011344	Tnfrsf11b Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 11B
chr5_-_168734296 Show fit	7.81	ENSRNOT00000066120	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr4_-_82209933 Show fit	7.66	ENSRNOT00000091106	LOC100912608 Links NCBI RGD Ensembl Show fit	homeobox protein Hox-A10-like
chr17_+_13670520 Show fit	7.66	ENSRNOT00000019442	Shc3 Links NCBI RGD Ensembl Show fit	SHC adaptor protein 3
chr4_-_82295470 Show fit	7.64	ENSRNOT00000091073	Hoxa10 Links NCBI RGD Ensembl Show fit	homeobox A10
chr3_-_107760550 Show fit	7.56	ENSRNOT00000077091 ENSRNOT00000051638	Meis2 Links NCBI RGD Ensembl Show fit	Meis homeobox 2
chr9_+_2202511 Show fit	7.54	ENSRNOT00000017556	Satb1 Links NCBI RGD Ensembl Show fit	SATB homeobox 1
chr15_-_41338284 Show fit	7.38	ENSRNOT00000077225	Tnfrsf19 Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 19
chr10_+_98706960 Show fit	7.26	ENSRNOT00000006217	Map2k6 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase 6
chr10_+_81913689 Show fit	7.03	ENSRNOT00000003780	Tob1 Links NCBI RGD Ensembl Show fit	transducer of ErbB-2.1
chr9_+_66335492 Show fit	6.93	ENSRNOT00000037555	RGD1562029 Links NCBI RGD Ensembl Show fit	similar to KIAA2012 protein
chr2_-_140618405 Show fit	6.85	ENSRNOT00000017736	Setd7 Links NCBI RGD Ensembl Show fit	SET domain containing (lysine methyltransferase) 7
chr12_+_27155587 Show fit	6.84	ENSRNOT00000044800	AABR07035916.1 Links NCBI RGD Ensembl Show fit
chr3_-_46726946 Show fit	6.73	ENSRNOT00000011030 ENSRNOT00000086576	Itgb6 Links NCBI RGD Ensembl Show fit	integrin subunit beta 6
chr13_-_111581018 Show fit	6.62	ENSRNOT00000083072 ENSRNOT00000077981	Sertad4 Links NCBI RGD Ensembl Show fit	SERTA domain containing 4
chr3_-_168018410 Show fit	6.50	ENSRNOT00000087579	Bcas1 Links NCBI RGD Ensembl Show fit	breast carcinoma amplified sequence 1
chrX_+_9436707 Show fit	6.28	ENSRNOT00000004187	Cask Links NCBI RGD Ensembl Show fit	calcium/calmodulin dependent serine protein kinase
chr9_-_61810417 Show fit	6.18	ENSRNOT00000020910	Rftn2 Links NCBI RGD Ensembl Show fit	raftlin family member 2
chr20_+_48335540 Show fit	6.17	ENSRNOT00000000352	Cd24 Links NCBI RGD Ensembl Show fit	CD24 molecule
chr15_+_86243148 Show fit	6.16	ENSRNOT00000084471 ENSRNOT00000090727	Lmo7 Links NCBI RGD Ensembl Show fit	LIM domain 7
chr14_+_63095720 Show fit	6.12	ENSRNOT00000006071	Ppargc1a Links NCBI RGD Ensembl Show fit	PPARG coactivator 1 alpha
chr2_+_179952227 Show fit	6.05	ENSRNOT00000015081	Pdgfc Links NCBI RGD Ensembl Show fit	platelet derived growth factor C
chr5_+_4373626 Show fit	5.97	ENSRNOT00000064946	Eya1 Links NCBI RGD Ensembl Show fit	EYA transcriptional coactivator and phosphatase 1
chr13_+_106463368 Show fit	5.84	ENSRNOT00000003489	Esrrg Links NCBI RGD Ensembl Show fit	estrogen-related receptor gamma
chr13_+_71110064 Show fit	5.75	ENSRNOT00000088329	Rgs8 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 8
chr14_-_87701884 Show fit	5.74	ENSRNOT00000079338	Mospd1 Links NCBI RGD Ensembl Show fit	motile sperm domain containing 1
chr18_+_30909490 Show fit	5.61	ENSRNOT00000026967	Pcdhgb8 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 8
chr2_-_256154584 Show fit	5.57	ENSRNOT00000072487	AABR07013776.1 Links NCBI RGD Ensembl Show fit
chr13_-_81214494 Show fit	5.50	ENSRNOT00000004950 ENSRNOT00000082385	Prrx1 Links NCBI RGD Ensembl Show fit	paired related homeobox 1
chr17_-_389967 Show fit	5.49	ENSRNOT00000023865	Fbp2 Links NCBI RGD Ensembl Show fit	fructose-bisphosphatase 2
chrX_-_159891326 Show fit	5.44	ENSRNOT00000001154	Rbmx Links NCBI RGD Ensembl Show fit	RNA binding motif protein, X-linked
chr7_+_144628120 Show fit	5.36	ENSRNOT00000022247	Hoxc5 Links NCBI RGD Ensembl Show fit	homeo box C5
chr2_+_188528979 Show fit	5.35	ENSRNOT00000087934	Thbs3 Links NCBI RGD Ensembl Show fit	thrombospondin 3
chrX_-_18726732 Show fit	5.23	ENSRNOT00000026214	Ubqln2 Links NCBI RGD Ensembl Show fit	ubiquilin 2
chr11_-_62451149 Show fit	4.97	ENSRNOT00000093686 ENSRNOT00000081443	Zbtb20 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 20
chr4_-_82203154 Show fit	4.93	ENSRNOT00000086210	LOC100912608 Links NCBI RGD Ensembl Show fit	homeobox protein Hox-A10-like
chr7_-_107009330 Show fit	4.91	ENSRNOT00000074573	Kcnq3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily Q member 3
chr2_+_196013799 Show fit	4.91	ENSRNOT00000084023	Pogz Links NCBI RGD Ensembl Show fit	pogo transposable element with ZNF domain
chr10_+_84119884 Show fit	4.69	ENSRNOT00000009951	Hoxb9 Links NCBI RGD Ensembl Show fit	homeo box B9
chr9_+_40817654 Show fit	4.62	ENSRNOT00000037392	AABR07067339.1 Links NCBI RGD Ensembl Show fit
chr18_+_14756684 Show fit	4.45	ENSRNOT00000076085 ENSRNOT00000076129	Mapre2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein, RP/EB family, member 2
chr6_-_27721120 Show fit	4.38	ENSRNOT00000071425	Rab10 Links NCBI RGD Ensembl Show fit	RAB10, member RAS oncogene family
chr18_+_30900291 Show fit	4.35	ENSRNOT00000060461	Pcdhgb7 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 7
chr6_+_28515025 Show fit	4.33	ENSRNOT00000088033 ENSRNOT00000005317 ENSRNOT00000081141	Dnajc27 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C27
chr8_+_111210811 Show fit	4.26	ENSRNOT00000011347	Amotl2 Links NCBI RGD Ensembl Show fit	angiomotin like 2
chr17_-_84830185 Show fit	4.25	ENSRNOT00000040697	Skida1 Links NCBI RGD Ensembl Show fit	SKI/DACH domain containing 1
chr13_+_5480150 Show fit	4.18	ENSRNOT00000057873	AABR07019870.1 Links NCBI RGD Ensembl Show fit
chr1_+_41590494 Show fit	4.14	ENSRNOT00000089984	Esr1 Links NCBI RGD Ensembl Show fit	estrogen receptor 1
chr15_-_2966576 Show fit	3.94	ENSRNOT00000070893 ENSRNOT00000017383	Kat6b Links NCBI RGD Ensembl Show fit	lysine acetyltransferase 6B
chr1_-_263431290 Show fit	3.94	ENSRNOT00000022633	Slc25a28 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 28
chr3_+_116899878 Show fit	3.89	ENSRNOT00000090802 ENSRNOT00000066101	Sema6d Links NCBI RGD Ensembl Show fit	semaphorin 6D
chr16_+_37500017 Show fit	3.80	ENSRNOT00000081634	AC135696.1 Links NCBI RGD Ensembl Show fit	high mobility group box 1 (Hmgb1), mRNA
chr4_-_82215022 Show fit	3.63	ENSRNOT00000010256	Hoxa11 Links NCBI RGD Ensembl Show fit	homeobox A11
chr14_-_37770059 Show fit	3.59	ENSRNOT00000029721	Slc10a4 Links NCBI RGD Ensembl Show fit	solute carrier family 10, member 4
chr4_+_78240385 Show fit	3.57	ENSRNOT00000011041	Zfp775 Links NCBI RGD Ensembl Show fit	zinc finger protein 775
chr3_+_58164931 Show fit	3.54	ENSRNOT00000002078	Dlx1 Links NCBI RGD Ensembl Show fit	distal-less homeobox 1
chr3_+_151691515 Show fit	3.48	ENSRNOT00000052236	AC118414.1 Links NCBI RGD Ensembl Show fit
chr16_-_73152921 Show fit	3.46	ENSRNOT00000048602	Zmat4 Links NCBI RGD Ensembl Show fit	zinc finger, matrin type 4
chrX_-_134866210 Show fit	3.42	ENSRNOT00000005331	Apln Links NCBI RGD Ensembl Show fit	apelin
chr2_+_150756185 Show fit	3.36	ENSRNOT00000088461 ENSRNOT00000036808	Mbnl1 Links NCBI RGD Ensembl Show fit	muscleblind-like splicing regulator 1
chr6_+_73358112 Show fit	3.35	ENSRNOT00000041373	Arhgap5 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 5
chr7_-_36408588 Show fit	3.34	ENSRNOT00000063946	Cradd Links NCBI RGD Ensembl Show fit	CASP2 and RIPK1 domain containing adaptor with death domain
chrX_+_86126157 Show fit	3.33	ENSRNOT00000006992	Klhl4 Links NCBI RGD Ensembl Show fit	kelch-like family member 4
chr3_-_43119159 Show fit	3.27	ENSRNOT00000041394	Nr4a2 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 4, group A, member 2
chr15_-_52214616 Show fit	3.23	ENSRNOT00000015035	Sftpc Links NCBI RGD Ensembl Show fit	surfactant protein C
chr10_-_43253296 Show fit	3.15	ENSRNOT00000003486	Hand1 Links NCBI RGD Ensembl Show fit	heart and neural crest derivatives expressed 1
chr10_+_75365822 Show fit	3.13	ENSRNOT00000055705	Vezf1 Links NCBI RGD Ensembl Show fit	vascular endothelial zinc finger 1
chr10_-_89700283 Show fit	3.12	ENSRNOT00000028213	Etv4 Links NCBI RGD Ensembl Show fit	ets variant 4
chr10_-_86004096 Show fit	3.12	ENSRNOT00000091978 ENSRNOT00000066855	Stac2 Links NCBI RGD Ensembl Show fit	SH3 and cysteine rich domain 2
chr1_-_248898607 Show fit	3.03	ENSRNOT00000074393	NEWGENE_1307313 Links NCBI RGD Ensembl Show fit	dickkopf WNT signaling pathway inhibitor 1
chr13_-_111474411 Show fit	2.98	ENSRNOT00000072729	Hhat Links NCBI RGD Ensembl Show fit	hedgehog acyltransferase
chr2_-_250241590 Show fit	2.84	ENSRNOT00000077221 ENSRNOT00000067502	Lmo4 Links NCBI RGD Ensembl Show fit	LIM domain only 4
chr4_+_44321883 Show fit	2.69	ENSRNOT00000091095	Tes Links NCBI RGD Ensembl Show fit	testin LIM domain protein
chr9_-_38196273 Show fit	2.69	ENSRNOT00000044452	Dst Links NCBI RGD Ensembl Show fit	dystonin
chr7_-_132984110 Show fit	2.67	ENSRNOT00000046626	Hmgb1-ps3 Links NCBI RGD Ensembl Show fit	high mobility group box 1, pseudogene 3
chr18_-_15688284 Show fit	2.66	ENSRNOT00000091816	Dsg3 Links NCBI RGD Ensembl Show fit	desmoglein 3
chr3_+_149741312 Show fit	2.63	ENSRNOT00000070854	LOC100911637 Links NCBI RGD Ensembl Show fit	high mobility group protein B1-like
chr1_-_253185533 Show fit	2.57	ENSRNOT00000067822	Pank1 Links NCBI RGD Ensembl Show fit	pantothenate kinase 1
chr8_+_117620317 Show fit	2.53	ENSRNOT00000084220	Celsr3 Links NCBI RGD Ensembl Show fit	cadherin, EGF LAG seven-pass G-type receptor 3
chr2_-_143104412 Show fit	2.42	ENSRNOT00000058116	Ufm1 Links NCBI RGD Ensembl Show fit	ubiquitin-fold modifier 1
chr10_+_10644572 Show fit	2.25	ENSRNOT00000004026	Ppl Links NCBI RGD Ensembl Show fit	periplakin
chr1_-_24302298 Show fit	2.19	ENSRNOT00000083452	Sgk1 Links NCBI RGD Ensembl Show fit	serum/glucocorticoid regulated kinase 1
chr13_-_52514875 Show fit	2.17	ENSRNOT00000064758	Nav1 Links NCBI RGD Ensembl Show fit	neuron navigator 1
chr9_-_4447715 Show fit	2.16	ENSRNOT00000061882	Kat2b Links NCBI RGD Ensembl Show fit	lysine acetyltransferase 2B
chr2_-_211017778 Show fit	2.11	ENSRNOT00000026883	Sypl2 Links NCBI RGD Ensembl Show fit	synaptophysin-like 2
chr6_+_99625306 Show fit	2.06	ENSRNOT00000008573	Plekhg3 Links NCBI RGD Ensembl Show fit	pleckstrin homology and RhoGEF domain containing G3
chr1_-_198316882 Show fit	2.06	ENSRNOT00000085304 ENSRNOT00000064985	Taok2 Links NCBI RGD Ensembl Show fit	TAO kinase 2
chr10_+_84182118 Show fit	2.06	ENSRNOT00000011027	Hoxb3 Links NCBI RGD Ensembl Show fit	homeo box B3
chr4_+_179481263 Show fit	2.02	ENSRNOT00000021284	Etfrf1 Links NCBI RGD Ensembl Show fit	electron transfer flavoprotein regulatory factor 1
chr4_+_82300778 Show fit	1.98	ENSRNOT00000075254	Hoxa11-as Links NCBI RGD Ensembl Show fit	homeobox A11, opposite strand
chr2_+_142686724 Show fit	1.91	ENSRNOT00000014614	Proser1 Links NCBI RGD Ensembl Show fit	proline and serine rich 1
chr16_-_74264142 Show fit	1.73	ENSRNOT00000026067	Dkk4 Links NCBI RGD Ensembl Show fit	dickkopf WNT signaling pathway inhibitor 4
chr3_+_148541909 Show fit	1.71	ENSRNOT00000012187	Ccm2l Links NCBI RGD Ensembl Show fit	CCM2 like scaffolding protein
chr2_+_51672722 Show fit	1.67	ENSRNOT00000016485	Fgf10 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 10
chr5_-_169017295 Show fit	1.61	ENSRNOT00000067481	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr9_-_3697736 Show fit	1.61	ENSRNOT00000087331	Kcnh8 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 8
chr3_-_9262628 Show fit	1.60	ENSRNOT00000013286	Aif1l Links NCBI RGD Ensembl Show fit	allograft inflammatory factor 1-like
chr7_+_24939498 Show fit	1.58	ENSRNOT00000010601	Ckap4 Links NCBI RGD Ensembl Show fit	cytoskeleton-associated protein 4
chr8_+_63600663 Show fit	1.58	ENSRNOT00000012644	Hcn4 Links NCBI RGD Ensembl Show fit	hyperpolarization activated cyclic nucleotide-gated potassium channel 4
chr4_-_60548021 Show fit	1.54	ENSRNOT00000065546	AABR07060165.1 Links NCBI RGD Ensembl Show fit
chr4_-_82300503 Show fit	1.53	ENSRNOT00000071568	Hoxa11 Links NCBI RGD Ensembl Show fit	homeobox A11
chr8_-_118182559 Show fit	1.52	ENSRNOT00000084838	Dhx30 Links NCBI RGD Ensembl Show fit	DExH-box helicase 30
chr2_+_204427608 Show fit	1.49	ENSRNOT00000083374	Nhlh2 Links NCBI RGD Ensembl Show fit	nescient helix loop helix 2
chr2_-_211001258 Show fit	1.49	ENSRNOT00000037336	Atxn7l2 Links NCBI RGD Ensembl Show fit	ataxin 7-like 2
chr12_-_47793534 Show fit	1.45	ENSRNOT00000001588	Fam222a Links NCBI RGD Ensembl Show fit	family with sequence similarity 222, member A
chr6_-_55524436 Show fit	1.43	ENSRNOT00000006752	Tspan13 Links NCBI RGD Ensembl Show fit	tetraspanin 13
chr4_+_82214342 Show fit	1.41	ENSRNOT00000066360	Hoxa11-as Links NCBI RGD Ensembl Show fit	homeobox A11, opposite strand
chrX_-_115175299 Show fit	1.40	ENSRNOT00000074322	Dcx Links NCBI RGD Ensembl Show fit	doublecortin
chr10_+_64398339 Show fit	1.38	ENSRNOT00000056278	Mrm3 Links NCBI RGD Ensembl Show fit	mitochondrial rRNA methyltransferase 3
chr2_+_205525204 Show fit	1.34	ENSRNOT00000091210	Csde1 Links NCBI RGD Ensembl Show fit	cold shock domain containing E1
chr20_+_42966140 Show fit	1.25	ENSRNOT00000000707	Marcks Links NCBI RGD Ensembl Show fit	myristoylated alanine rich protein kinase C substrate
chr10_+_94407559 Show fit	1.21	ENSRNOT00000013046	Ddx42 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 42
chr8_+_70630767 Show fit	1.10	ENSRNOT00000051353	Igdcc3 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, DCC subclass, member 3
chr1_-_218100272 Show fit	0.91	ENSRNOT00000028411 ENSRNOT00000088588	Ccnd1 Links NCBI RGD Ensembl Show fit	cyclin D1
chr10_-_64398294 Show fit	0.88	ENSRNOT00000010386	Glod4 Links NCBI RGD Ensembl Show fit	glyoxalase domain containing 4
chr19_-_25914689 Show fit	0.87	ENSRNOT00000091994 ENSRNOT00000039354	Nf1x Links NCBI RGD Ensembl Show fit	nuclear factor 1 X
chr4_+_157554794 Show fit	0.86	ENSRNOT00000024116	Ing4 Links NCBI RGD Ensembl Show fit	inhibitor of growth family, member 4
chr13_-_82006005 Show fit	0.83	ENSRNOT00000039581	Mettl11b Links NCBI RGD Ensembl Show fit	methyltransferase like 11B
chr13_-_84619023 Show fit	0.82	ENSRNOT00000089827 ENSRNOT00000045056	Pogk Links NCBI RGD Ensembl Show fit	pogo transposable element with KRAB domain
chr8_-_78397123 Show fit	0.82	ENSRNOT00000087270 ENSRNOT00000084925	Tcf12 Links NCBI RGD Ensembl Show fit	transcription factor 12
chr5_+_122100099 Show fit	0.70	ENSRNOT00000007738	Pde4b Links NCBI RGD Ensembl Show fit	phosphodiesterase 4B
chr10_-_83128297 Show fit	0.68	ENSRNOT00000082160	Kat7 Links NCBI RGD Ensembl Show fit	lysine acetyltransferase 7
chr11_-_35697072 Show fit	0.67	ENSRNOT00000039999	Erg Links NCBI RGD Ensembl Show fit	ERG, ETS transcription factor
chr15_+_105851542 Show fit	0.62	ENSRNOT00000086959	Rap2a Links NCBI RGD Ensembl Show fit	RAS related protein 2a
chr13_+_89797800 Show fit	0.61	ENSRNOT00000005811	Usf1 Links NCBI RGD Ensembl Show fit	upstream transcription factor 1
chr9_+_37593032 Show fit	0.61	ENSRNOT00000051890	AABR07067274.1 Links NCBI RGD Ensembl Show fit
chrX_-_26376467 Show fit	0.55	ENSRNOT00000051655 ENSRNOT00000036502	Arhgap6 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 6
chr7_-_50034932 Show fit	0.55	ENSRNOT00000081885	Ptprq Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, Q
chr9_+_46657922 Show fit	0.52	ENSRNOT00000019180	Map4k4 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 4
chr7_-_59514939 Show fit	0.49	ENSRNOT00000085579	Kcnmb4 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily M regulatory beta subunit 4
chr15_+_37171052 Show fit	0.48	ENSRNOT00000011684	Zmym2 Links NCBI RGD Ensembl Show fit	zinc finger MYM-type containing 2
chr9_-_111213098 Show fit	0.44	ENSRNOT00000087355	Gin1 Links NCBI RGD Ensembl Show fit	gypsy retrotransposon integrase 1
chr6_-_99843245 Show fit	0.42	ENSRNOT00000080270	Gpx2 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 2
chr7_+_58570579 Show fit	0.39	ENSRNOT00000081227	A930009A15Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA A930009A15 gene
chr3_+_47677720 Show fit	0.36	ENSRNOT00000065340	Tbr1 Links NCBI RGD Ensembl Show fit	T-box, brain, 1
chr1_-_167971151 Show fit	0.31	ENSRNOT00000043023	Olr53 Links NCBI RGD Ensembl Show fit	olfactory receptor 53
chr5_-_144479306 Show fit	0.30	ENSRNOT00000087697	Ago1 Links NCBI RGD Ensembl Show fit	argonaute 1, RISC catalytic component
chr6_+_8669722 Show fit	0.29	ENSRNOT00000048550	Camkmt Links NCBI RGD Ensembl Show fit	calmodulin-lysine N-methyltransferase
chr8_-_129371973 Show fit	0.27	ENSRNOT00000042614	Snrpe Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide E
chr5_-_139748489 Show fit	0.26	ENSRNOT00000078741	Nfyc Links NCBI RGD Ensembl Show fit	nuclear transcription factor Y subunit gamma
chr10_-_85574889 Show fit	0.20	ENSRNOT00000072274	LOC691153 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691153
chr2_-_139528162 Show fit	0.18	ENSRNOT00000014317	Slc7a11 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 11
chr16_-_71203609 Show fit	0.18	ENSRNOT00000088458	Nsd3 Links NCBI RGD Ensembl Show fit	nuclear receptor binding SET domain protein 3
chr16_+_49185560 Show fit	0.07	ENSRNOT00000014360	Helt Links NCBI RGD Ensembl Show fit	helt bHLH transcription factor
chr10_-_89699836 Show fit	0.06	ENSRNOT00000084311	Etv4 Links NCBI RGD Ensembl Show fit	ets variant 4
chr20_-_31598118 Show fit	0.04	ENSRNOT00000046537	Col13a1 Links NCBI RGD Ensembl Show fit	collagen type XIII alpha 1 chain
chr6_+_44009872 Show fit	0.00	ENSRNOT00000082657	Mboat2 Links NCBI RGD Ensembl Show fit	membrane bound O-acyltransferase domain containing 2

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
6.0	29.9	GO:0014878	response to electrical stimulus involved in regulation of muscle adaptation(GO:0014878)
4.7	14.2	GO:0021836	chemorepulsion involved in postnatal olfactory bulb interneuron migration(GO:0021836)
4.4	44.2	GO:0046684	response to pyrethroid(GO:0046684)
4.0	12.1	GO:1903598	angiotensin-mediated drinking behavior(GO:0003051) tryptophan transport(GO:0015827) positive regulation of gap junction assembly(GO:1903598)
3.4	10.3	GO:0099553	trans-synaptic signaling by lipid, modulating synaptic transmission(GO:0099552) trans-synaptic signaling by endocannabinoid, modulating synaptic transmission(GO:0099553)
3.2	9.6	GO:2000820	positive regulation of histone H3-K9 trimethylation(GO:1900114) negative regulation of dendrite extension(GO:1903860) negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820)
3.1	9.4	GO:1900039	positive regulation of cellular response to hypoxia(GO:1900039)
2.7	13.6	GO:0038031	non-canonical Wnt signaling pathway via JNK cascade(GO:0038031)
2.6	7.8	GO:0042489	negative regulation of odontogenesis of dentin-containing tooth(GO:0042489)
2.1	8.3	GO:0043490	malate-aspartate shuttle(GO:0043490)
2.1	6.2	GO:0002840	T cell mediated immune response to tumor cell(GO:0002424) regulation of T cell mediated immune response to tumor cell(GO:0002840)
2.0	28.0	GO:0071420	cellular response to histamine(GO:0071420)
1.8	7.3	GO:0072709	cellular response to sorbitol(GO:0072709)
1.7	5.2	GO:1900186	negative regulation of clathrin-mediated endocytosis(GO:1900186)
1.5	12.3	GO:0035360	positive regulation of peroxisome proliferator activated receptor signaling pathway(GO:0035360)
1.5	11.9	GO:0090273	regulation of somatostatin secretion(GO:0090273)
1.4	5.5	GO:0046351	disaccharide biosynthetic process(GO:0046351)
1.3	6.7	GO:0038044	transforming growth factor-beta secretion(GO:0038044)
1.2	3.5	GO:0021898	regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment(GO:0021882) commitment of multipotent stem cells to neuronal lineage in forebrain(GO:0021898)
1.1	15.4	GO:0048245	eosinophil chemotaxis(GO:0048245)
1.1	4.4	GO:0097051	establishment of protein localization to endoplasmic reticulum membrane(GO:0097051)
1.0	4.1	GO:1990375	baculum development(GO:1990375)
1.0	6.2	GO:0033227	dsRNA transport(GO:0033227)
1.0	8.2	GO:0072257	metanephric nephron tubule epithelial cell differentiation(GO:0072257) regulation of metanephric nephron tubule epithelial cell differentiation(GO:0072307)
1.0	6.0	GO:0072513	positive regulation of secondary heart field cardioblast proliferation(GO:0072513)
1.0	17.7	GO:0001573	ganglioside metabolic process(GO:0001573)
0.9	3.4	GO:0043397	corticotropin-releasing hormone secretion(GO:0043396) regulation of corticotropin-releasing hormone secretion(GO:0043397)
0.8	3.1	GO:0003219	cardiac right ventricle formation(GO:0003219)
0.8	8.3	GO:0007016	cytoskeletal anchoring at plasma membrane(GO:0007016)
0.7	2.2	GO:0018076	N-terminal peptidyl-lysine acetylation(GO:0018076)
0.7	10.0	GO:0071786	endoplasmic reticulum tubular network organization(GO:0071786)
0.7	7.0	GO:0031441	negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA catabolic process(GO:1902373)
0.7	6.8	GO:0018026	peptidyl-lysine monomethylation(GO:0018026)
0.7	3.3	GO:0051866	general adaptation syndrome(GO:0051866)
0.6	3.2	GO:0050828	regulation of liquid surface tension(GO:0050828)
0.6	2.5	GO:0036515	serotonergic neuron axon guidance(GO:0036515)
0.6	15.4	GO:0010842	retina layer formation(GO:0010842)
0.6	1.7	GO:0090271	positive regulation of fibroblast growth factor production(GO:0090271)
0.6	1.7	GO:0071338	mammary gland bud morphogenesis(GO:0060648) submandibular salivary gland formation(GO:0060661) positive regulation of hair follicle cell proliferation(GO:0071338)
0.5	5.5	GO:0048664	neuron fate determination(GO:0048664)
0.5	7.5	GO:0043374	CD8-positive, alpha-beta T cell differentiation(GO:0043374)
0.5	3.2	GO:0060762	regulation of branching involved in mammary gland duct morphogenesis(GO:0060762)
0.5	2.1	GO:0021615	glossopharyngeal nerve morphogenesis(GO:0021615)
0.5	5.4	GO:0060346	bone trabecula formation(GO:0060346)
0.5	2.4	GO:1990564	protein polyufmylation(GO:1990564) protein K69-linked ufmylation(GO:1990592)
0.5	6.0	GO:0007171	activation of transmembrane receptor protein tyrosine kinase activity(GO:0007171)
0.5	10.5	GO:0010614	negative regulation of cardiac muscle hypertrophy(GO:0010614)
0.4	5.8	GO:0060159	regulation of dopamine receptor signaling pathway(GO:0060159)
0.4	9.1	GO:0007289	spermatid nucleus differentiation(GO:0007289)
0.4	12.8	GO:0060065	uterus development(GO:0060065)
0.4	16.5	GO:0051491	positive regulation of filopodium assembly(GO:0051491)
0.4	6.3	GO:0010839	negative regulation of keratinocyte proliferation(GO:0010839)
0.4	4.9	GO:0051382	kinetochore assembly(GO:0051382)
0.4	1.5	GO:1902775	mitochondrial large ribosomal subunit assembly(GO:1902775)
0.4	11.6	GO:0097352	autophagosome maturation(GO:0097352)
0.3	8.8	GO:0006376	mRNA splice site selection(GO:0006376)
0.3	1.6	GO:1904045	cellular response to aldosterone(GO:1904045)
0.3	10.1	GO:0021952	central nervous system projection neuron axonogenesis(GO:0021952)
0.3	0.8	GO:0006480	N-terminal protein amino acid methylation(GO:0006480)
0.2	1.2	GO:1900020	regulation of protein kinase C activity(GO:1900019) positive regulation of protein kinase C activity(GO:1900020)
0.2	1.7	GO:0060789	hair follicle placode formation(GO:0060789)
0.2	4.9	GO:0061548	ganglion development(GO:0061548)
0.2	2.2	GO:0043402	glucocorticoid mediated signaling pathway(GO:0043402)
0.2	1.6	GO:0000160	phosphorelay signal transduction system(GO:0000160)
0.2	0.9	GO:0000320	re-entry into mitotic cell cycle(GO:0000320)
0.2	0.7	GO:0072720	response to dithiothreitol(GO:0072720)
0.2	1.3	GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay(GO:0070966)
0.2	10.1	GO:0048488	synaptic vesicle endocytosis(GO:0048488)
0.2	3.3	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977)
0.2	0.6	GO:0046016	regulation of transcription from RNA polymerase II promoter by glucose(GO:0000430) positive regulation of transcription from RNA polymerase II promoter by glucose(GO:0000432) late viral transcription(GO:0019086) positive regulation of transcription by glucose(GO:0046016)
0.2	10.6	GO:0032007	negative regulation of TOR signaling(GO:0032007)
0.2	2.7	GO:0008090	retrograde axonal transport(GO:0008090)
0.2	0.4	GO:0021764	amygdala development(GO:0021764)
0.2	5.0	GO:0032728	positive regulation of interferon-beta production(GO:0032728)
0.2	0.7	GO:0003199	endocardial cushion to mesenchymal transition involved in heart valve formation(GO:0003199)
0.2	8.3	GO:2000649	regulation of sodium ion transmembrane transporter activity(GO:2000649)
0.1	3.6	GO:0015721	bile acid and bile salt transport(GO:0015721)
0.1	2.6	GO:0015937	coenzyme A biosynthetic process(GO:0015937)
0.1	0.4	GO:0009609	response to symbiotic bacterium(GO:0009609)
0.1	3.9	GO:0014912	negative regulation of smooth muscle cell migration(GO:0014912)
0.1	3.9	GO:0034755	iron ion transmembrane transport(GO:0034755)
0.1	10.8	GO:1901379	regulation of potassium ion transmembrane transport(GO:1901379)
0.1	7.6	GO:0008542	visual learning(GO:0008542)
0.1	4.3	GO:0046825	regulation of protein export from nucleus(GO:0046825)
0.1	0.7	GO:1901898	negative regulation of relaxation of cardiac muscle(GO:1901898)
0.1	3.3	GO:0002053	positive regulation of mesenchymal cell proliferation(GO:0002053)
0.1	5.5	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157)
0.1	12.2	GO:0021987	cerebral cortex development(GO:0021987)
0.1	0.9	GO:0021684	cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707)
0.1	0.9	GO:0043983	histone H4-K12 acetylation(GO:0043983)
0.1	2.8	GO:0021522	spinal cord motor neuron differentiation(GO:0021522)
0.1	0.6	GO:0045198	establishment of epithelial cell apical/basal polarity(GO:0045198)
0.1	3.0	GO:0018345	protein palmitoylation(GO:0018345)
0.1	5.6	GO:0050885	neuromuscular process controlling balance(GO:0050885)
0.1	12.2	GO:0008360	regulation of cell shape(GO:0008360)
0.1	0.3	GO:0090625	mRNA cleavage involved in gene silencing by siRNA(GO:0090625)
0.1	0.4	GO:0015074	DNA integration(GO:0015074)
0.1	3.9	GO:0043966	histone H3 acetylation(GO:0043966)
0.1	7.4	GO:0046330	positive regulation of JNK cascade(GO:0046330)
0.1	1.5	GO:0007617	mating behavior(GO:0007617) multi-organism reproductive behavior(GO:0044705)
0.1	3.1	GO:0001885	endothelial cell development(GO:0001885)
0.0	0.5	GO:0005513	detection of calcium ion(GO:0005513)
0.0	2.1	GO:0021762	substantia nigra development(GO:0021762)
0.0	0.6	GO:0051895	negative regulation of focal adhesion assembly(GO:0051895) negative regulation of adherens junction organization(GO:1903392)
0.0	7.2	GO:0007611	learning or memory(GO:0007611)
0.0	5.5	GO:0043524	negative regulation of neuron apoptotic process(GO:0043524)
0.0	4.8	GO:0043401	steroid hormone mediated signaling pathway(GO:0043401)
0.0	3.5	GO:0030879	mammary gland development(GO:0030879)
0.0	2.0	GO:0022904	respiratory electron transport chain(GO:0022904)
0.0	1.4	GO:0001510	RNA methylation(GO:0001510)
0.0	0.9	GO:0010501	RNA secondary structure unwinding(GO:0010501)
0.0	2.1	GO:0035023	regulation of Rho protein signal transduction(GO:0035023)
0.0	1.4	GO:1903169	regulation of calcium ion transmembrane transport(GO:1903169)
0.0	0.2	GO:0089711	L-glutamate transmembrane transport(GO:0089711)
0.0	0.1	GO:0001967	suckling behavior(GO:0001967)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
5.9	17.7	GO:0034686	integrin alphav-beta8 complex(GO:0034686)
2.2	44.2	GO:0001518	voltage-gated sodium channel complex(GO:0001518)
1.2	28.0	GO:1902711	GABA-A receptor complex(GO:1902711)
1.2	9.4	GO:0044305	calyx of Held(GO:0044305)
1.1	5.4	GO:0044530	supraspliceosomal complex(GO:0044530)
1.0	15.4	GO:0031045	dense core granule(GO:0031045)
0.6	10.3	GO:0097449	astrocyte projection(GO:0097449)
0.5	2.7	GO:0060053	neurofilament cytoskeleton(GO:0060053)
0.5	38.1	GO:0019005	SCF ubiquitin ligase complex(GO:0019005)
0.5	1.6	GO:0098855	HCN channel complex(GO:0098855)
0.5	10.3	GO:0000930	gamma-tubulin complex(GO:0000930)
0.5	13.6	GO:0000159	protein phosphatase type 2A complex(GO:0000159)
0.5	6.3	GO:0005652	nuclear lamina(GO:0005652)
0.4	1.3	GO:0070937	CRD-mediated mRNA stability complex(GO:0070937)
0.4	4.1	GO:0097550	transcriptional preinitiation complex(GO:0097550)
0.4	3.9	GO:0070776	H3 histone acetyltransferase complex(GO:0070775) MOZ/MORF histone acetyltransferase complex(GO:0070776)
0.4	7.0	GO:0030014	CCR4-NOT complex(GO:0030014)
0.4	6.2	GO:0031362	anchored component of external side of plasma membrane(GO:0031362)
0.4	16.5	GO:0044295	axonal growth cone(GO:0044295)
0.3	4.4	GO:0032593	insulin-responsive compartment(GO:0032593)
0.3	7.1	GO:0043194	axon initial segment(GO:0043194)
0.3	1.2	GO:0042585	germinal vesicle(GO:0042585) dendritic branch(GO:0044307)
0.3	9.0	GO:0046658	anchored component of plasma membrane(GO:0046658)
0.3	11.9	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
0.2	24.6	GO:0016605	PML body(GO:0016605)
0.2	3.2	GO:0097208	alveolar lamellar body(GO:0097208)
0.2	7.1	GO:0030673	axolemma(GO:0030673)
0.2	6.7	GO:0008305	integrin complex(GO:0008305)
0.2	4.4	GO:0035371	microtubule plus-end(GO:0035371)
0.2	15.6	GO:0008076	voltage-gated potassium channel complex(GO:0008076)
0.2	5.8	GO:0032809	neuronal cell body membrane(GO:0032809)
0.2	20.0	GO:0005913	cell-cell adherens junction(GO:0005913)
0.1	28.6	GO:0043197	dendritic spine(GO:0043197)
0.1	2.1	GO:0030285	integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563)
0.1	2.2	GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex(GO:0005671)
0.1	0.6	GO:0016589	NURF complex(GO:0016589)
0.1	2.1	GO:0071782	endoplasmic reticulum tubular network(GO:0071782)
0.1	15.2	GO:0014069	postsynaptic density(GO:0014069)
0.1	3.4	GO:0010494	cytoplasmic stress granule(GO:0010494)
0.1	20.9	GO:0005667	transcription factor complex(GO:0005667)
0.1	10.9	GO:0043209	myelin sheath(GO:0043209)
0.1	5.5	GO:0030018	Z disc(GO:0030018)
0.1	7.4	GO:0055037	recycling endosome(GO:0055037)
0.0	0.3	GO:0034715	pICln-Sm protein complex(GO:0034715)
0.0	0.3	GO:0070578	micro-ribonucleoprotein complex(GO:0035068) RISC-loading complex(GO:0070578)
0.0	2.7	GO:0031463	Cul3-RING ubiquitin ligase complex(GO:0031463)
0.0	1.5	GO:0009295	nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.0	6.0	GO:0032993	protein-DNA complex(GO:0032993)
0.0	1.4	GO:0000123	histone acetyltransferase complex(GO:0000123)
0.0	0.9	GO:0000307	cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0	1.6	GO:0000932	cytoplasmic mRNA processing body(GO:0000932)
0.0	8.0	GO:0030425	dendrite(GO:0030425)
0.0	1.6	GO:0005884	actin filament(GO:0005884)
0.0	16.2	GO:0005887	integral component of plasma membrane(GO:0005887)
0.0	0.6	GO:0032421	stereocilium bundle(GO:0032421)
0.0	3.0	GO:0016607	nuclear speck(GO:0016607)
0.0	3.9	GO:0005743	mitochondrial inner membrane(GO:0005743)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
3.0	12.1	GO:0008241	peptidyl-dipeptidase activity(GO:0008241)
2.6	10.3	GO:0099583	neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration(GO:0099583)
2.4	11.9	GO:0008332	low voltage-gated calcium channel activity(GO:0008332)
2.2	17.7	GO:1990430	extracellular matrix protein binding(GO:1990430)
2.0	10.0	GO:0031849	olfactory receptor binding(GO:0031849)
2.0	28.0	GO:0005237	inhibitory extracellular ligand-gated ion channel activity(GO:0005237)
1.9	15.4	GO:0086006	voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
1.9	9.6	GO:0045322	unmethylated CpG binding(GO:0045322)
1.9	9.4	GO:0022841	potassium ion leak channel activity(GO:0022841)
1.7	8.3	GO:0005314	high-affinity glutamate transmembrane transporter activity(GO:0005314)
1.6	30.3	GO:0005248	voltage-gated sodium channel activity(GO:0005248)
1.5	5.8	GO:0050682	AF-2 domain binding(GO:0050682)
1.2	14.2	GO:0008046	axon guidance receptor activity(GO:0008046)
1.1	3.4	GO:0001069	regulatory region RNA binding(GO:0001069)
0.9	10.9	GO:0019911	structural constituent of myelin sheath(GO:0019911)
0.8	4.1	GO:0031798	type 1 metabotropic glutamate receptor binding(GO:0031798)
0.6	2.6	GO:0004594	pantothenate kinase activity(GO:0004594)
0.6	17.1	GO:0042056	chemoattractant activity(GO:0042056)
0.6	7.3	GO:0004708	MAP kinase kinase activity(GO:0004708)
0.6	3.6	GO:0008508	bile acid:sodium symporter activity(GO:0008508)
0.5	10.6	GO:0030676	Rac guanyl-nucleotide exchange factor activity(GO:0030676)
0.4	6.3	GO:0042043	neurexin family protein binding(GO:0042043)
0.4	3.9	GO:0015093	ferrous iron transmembrane transporter activity(GO:0015093)
0.4	7.8	GO:0005031	tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.3	3.9	GO:0030215	semaphorin receptor binding(GO:0030215)
0.3	2.2	GO:0043423	3-phosphoinositide-dependent protein kinase binding(GO:0043423)
0.3	2.2	GO:0004468	lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468)
0.3	6.2	GO:0030296	protein tyrosine kinase activator activity(GO:0030296)
0.3	3.3	GO:0070513	death domain binding(GO:0070513)
0.3	6.0	GO:0005161	platelet-derived growth factor receptor binding(GO:0005161)
0.3	0.8	GO:0071885	N-terminal protein N-methyltransferase activity(GO:0071885)
0.3	6.1	GO:0016922	ligand-dependent nuclear receptor binding(GO:0016922)
0.3	15.6	GO:0015459	potassium channel regulator activity(GO:0015459)
0.2	8.3	GO:0017080	sodium channel regulator activity(GO:0017080)
0.2	10.1	GO:0035255	ionotropic glutamate receptor binding(GO:0035255)
0.2	1.6	GO:0000155	phosphorelay sensor kinase activity(GO:0000155)
0.2	14.7	GO:0030971	receptor tyrosine kinase binding(GO:0030971)
0.2	4.4	GO:0098641	cadherin binding involved in cell-cell adhesion(GO:0098641)
0.2	3.3	GO:0035259	glucocorticoid receptor binding(GO:0035259)
0.2	5.8	GO:0001965	G-protein alpha-subunit binding(GO:0001965)
0.2	4.1	GO:0071837	HMG box domain binding(GO:0071837)
0.1	16.5	GO:0005262	calcium channel activity(GO:0005262)
0.1	6.2	GO:0042805	actinin binding(GO:0042805)
0.1	3.8	GO:0043425	bHLH transcription factor binding(GO:0043425)
0.1	13.6	GO:0030165	PDZ domain binding(GO:0030165)
0.1	1.4	GO:0008649	rRNA methyltransferase activity(GO:0008649)
0.1	2.1	GO:0031434	mitogen-activated protein kinase kinase binding(GO:0031434)
0.1	3.4	GO:0071855	neuropeptide receptor binding(GO:0071855)
0.1	6.8	GO:0002039	p53 binding(GO:0002039)
0.1	3.3	GO:0042169	SH2 domain binding(GO:0042169)
0.1	4.6	GO:0061733	histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1	7.6	GO:0005200	structural constituent of cytoskeleton(GO:0005200)
0.1	3.0	GO:0016409	palmitoyltransferase activity(GO:0016409)
0.1	4.9	GO:0005249	voltage-gated potassium channel activity(GO:0005249)
0.1	0.2	GO:0005294	neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.1	0.2	GO:0046976	histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1	9.1	GO:0003714	transcription corepressor activity(GO:0003714)
0.1	0.6	GO:0016004	phospholipase activator activity(GO:0016004)
0.1	1.4	GO:0005246	calcium channel regulator activity(GO:0005246)
0.0	0.7	GO:0004115	3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115)
0.0	18.4	GO:0004842	ubiquitin-protein transferase activity(GO:0004842)
0.0	14.4	GO:0031625	ubiquitin protein ligase binding(GO:0031625)
0.0	0.5	GO:0031624	ubiquitin conjugating enzyme binding(GO:0031624)
0.0	2.1	GO:0005089	Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0	0.3	GO:1990446	U1 snRNP binding(GO:1990446)
0.0	1.9	GO:0003724	RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004)
0.0	1.2	GO:0001786	phosphatidylserine binding(GO:0001786)
0.0	0.3	GO:0035198	miRNA binding(GO:0035198)
0.0	10.3	GO:0050839	cell adhesion molecule binding(GO:0050839)
0.0	12.7	GO:0005509	calcium ion binding(GO:0005509)
0.0	0.4	GO:0004602	glutathione peroxidase activity(GO:0004602)
0.0	0.6	GO:0019003	GDP binding(GO:0019003)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.2	24.5	PID INTEGRIN5 PATHWAY	Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.6	8.2	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.5	15.9	PID HDAC CLASSIII PATHWAY	Signaling events mediated by HDAC Class III
0.4	14.2	ST WNT BETA CATENIN PATHWAY	Wnt/beta-catenin Pathway
0.3	6.3	PID SYNDECAN 3 PATHWAY	Syndecan-3-mediated signaling events
0.3	12.8	PID FOXO PATHWAY	FoxO family signaling
0.2	8.7	PID BETA CATENIN NUC PATHWAY	Regulation of nuclear beta catenin signaling and target gene transcription
0.2	14.0	PID RHOA REG PATHWAY	Regulation of RhoA activity
0.2	9.9	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.1	7.2	NABA BASEMENT MEMBRANES	Genes encoding structural components of basement membranes
0.1	4.9	PID RAC1 REG PATHWAY	Regulation of RAC1 activity
0.1	7.3	PID LKB1 PATHWAY	LKB1 signaling events
0.1	7.7	PID AJDISS 2PATHWAY	Posttranslational regulation of adherens junction stability and dissassembly
0.1	6.8	PID P53 REGULATION PATHWAY	p53 pathway
0.1	3.0	PID HEDGEHOG 2PATHWAY	Signaling events mediated by the Hedgehog family
0.1	8.3	ST INTEGRIN SIGNALING PATHWAY	Integrin Signaling Pathway
0.1	2.1	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.1	2.8	PID IL6 7 PATHWAY	IL6-mediated signaling events
0.1	3.1	PID TAP63 PATHWAY	Validated transcriptional targets of TAp63 isoforms
0.1	3.9	PID TRKR PATHWAY	Neurotrophic factor-mediated Trk receptor signaling
0.1	1.4	PID LIS1 PATHWAY	Lissencephaly gene (LIS1) in neuronal migration and development
0.0	9.9	NABA ECM REGULATORS	Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
0.0	2.2	PID SMAD2 3NUCLEAR PATHWAY	Regulation of nuclear SMAD2/3 signaling
0.0	0.6	PID P38 ALPHA BETA DOWNSTREAM PATHWAY	Signaling mediated by p38-alpha and p38-beta
0.0	2.2	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.6	28.0	REACTOME GABA A RECEPTOR ACTIVATION	Genes involved in GABA A receptor activation
0.7	9.4	REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS	Genes involved in Tandem pore domain potassium channels
0.6	14.2	REACTOME ACTIVATION OF RAC	Genes involved in Activation of Rac
0.6	20.3	REACTOME INTERACTION BETWEEN L1 AND ANKYRINS	Genes involved in Interaction between L1 and Ankyrins
0.5	7.7	REACTOME SIGNAL ATTENUATION	Genes involved in Signal attenuation
0.5	12.4	REACTOME SIGNALING BY HIPPO	Genes involved in Signaling by Hippo
0.5	6.0	REACTOME VEGF LIGAND RECEPTOR INTERACTIONS	Genes involved in VEGF ligand-receptor interactions
0.3	7.3	REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION	Genes involved in activated TAK1 mediates p38 MAPK activation
0.3	22.7	REACTOME INTEGRIN CELL SURFACE INTERACTIONS	Genes involved in Integrin cell surface interactions
0.2	3.9	REACTOME OTHER SEMAPHORIN INTERACTIONS	Genes involved in Other semaphorin interactions
0.2	6.1	REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA	Genes involved in Circadian Repression of Expression by REV-ERBA
0.2	2.6	REACTOME VITAMIN B5 PANTOTHENATE METABOLISM	Genes involved in Vitamin B5 (pantothenate) metabolism
0.2	13.2	REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY	Genes involved in Nuclear Receptor transcription pathway
0.2	2.2	REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION	Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression
0.1	8.5	REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS	Genes involved in Amino acid and oligopeptide SLC transporters
0.1	5.5	REACTOME GLUCONEOGENESIS	Genes involved in Gluconeogenesis
0.1	7.6	REACTOME L1CAM INTERACTIONS	Genes involved in L1CAM interactions
0.1	1.2	REACTOME REGULATION OF INSULIN SECRETION BY ACETYLCHOLINE	Genes involved in Regulation of Insulin Secretion by Acetylcholine
0.1	6.3	REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS	Genes involved in Apoptotic cleavage of cellular proteins
0.1	1.7	REACTOME FGFR1 LIGAND BINDING AND ACTIVATION	Genes involved in FGFR1 ligand binding and activation
0.1	0.9	REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION	Genes involved in Pre-NOTCH Transcription and Translation
0.0	3.7	REACTOME POTASSIUM CHANNELS	Genes involved in Potassium Channels
0.0	4.9	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.0	0.3	REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS	Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0	0.7	REACTOME DARPP 32 EVENTS	Genes involved in DARPP-32 events
0.0	0.5	REACTOME SIGNALING BY FGFR1 MUTANTS	Genes involved in Signaling by FGFR1 mutants