GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nkx3-1 Links NCBI RGD Ensembl	ENSRNOG00000015477	NK3 homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nkx3-1	rn6_v1_chr15_+_51065316_51065316	0.10	6.5e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr8_-_120446455 Show fit	21.10	ENSRNOT00000085161 ENSRNOT00000042854 ENSRNOT00000037199	Arpp21 Links NCBI RGD Ensembl Show fit	cAMP regulated phosphoprotein 21
chr11_+_54619129 Show fit	13.20	ENSRNOT00000059924	Trat1 Links NCBI RGD Ensembl Show fit	T cell receptor associated transmembrane adaptor 1
chr15_+_31642169 Show fit	13.15	ENSRNOT00000072362	AABR07017833.1 Links NCBI RGD Ensembl Show fit
chr4_+_70572942 Show fit	13.11	ENSRNOT00000051964	AC142181.1 Links NCBI RGD Ensembl Show fit
chr15_+_31417147 Show fit	12.31	ENSRNOT00000092182	AABR07017824.2 Links NCBI RGD Ensembl Show fit
chr15_-_29761117 Show fit	12.17	ENSRNOT00000075194	AABR07017658.2 Links NCBI RGD Ensembl Show fit
chr19_-_10681145 Show fit	11.68	ENSRNOT00000022167	Ccl22 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 22
chr15_+_31097291 Show fit	11.65	ENSRNOT00000075456	AABR07017789.1 Links NCBI RGD Ensembl Show fit
chr1_-_104202591 Show fit	11.31	ENSRNOT00000035512	E2f8 Links NCBI RGD Ensembl Show fit	E2F transcription factor 8
chr15_+_30570483 Show fit	11.22	ENSRNOT00000071740	AABR07017745.1 Links NCBI RGD Ensembl Show fit
chr10_-_31419235 Show fit	9.89	ENSRNOT00000059496	Cyfip2 Links NCBI RGD Ensembl Show fit	cytoplasmic FMR1 interacting protein 2
chr15_+_31010891 Show fit	9.50	ENSRNOT00000088134	AABR07017781.1 Links NCBI RGD Ensembl Show fit
chr2_-_203413124 Show fit	9.48	ENSRNOT00000077898 ENSRNOT00000056140	Cd101 Links NCBI RGD Ensembl Show fit	CD101 molecule
chr2_-_132551235 Show fit	9.41	ENSRNOT00000058250	LOC100365525 Links NCBI RGD Ensembl Show fit	rCG65904-like
chr9_+_60900213 Show fit	8.95	ENSRNOT00000017859	Ccdc150 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 150
chr2_+_127625683 Show fit	8.77	ENSRNOT00000015474	Hspa4l Links NCBI RGD Ensembl Show fit	heat shock protein 4-like
chr15_-_30019055 Show fit	8.65	ENSRNOT00000073984	AABR07017681.1 Links NCBI RGD Ensembl Show fit
chr4_-_128266082 Show fit	8.29	ENSRNOT00000039549	Nup50 Links NCBI RGD Ensembl Show fit	nucleoporin 50
chrX_+_70461718 Show fit	8.26	ENSRNOT00000078233 ENSRNOT00000003789	Kif4a Links NCBI RGD Ensembl Show fit	kinesin family member 4A
chr15_-_29246222 Show fit	7.85	ENSRNOT00000081806	AABR07017617.1 Links NCBI RGD Ensembl Show fit
chr8_-_13906355 Show fit	7.70	ENSRNOT00000029634	Cep295 Links NCBI RGD Ensembl Show fit	centrosomal protein 295
chr13_-_95348913 Show fit	7.70	ENSRNOT00000057879	Akt3 Links NCBI RGD Ensembl Show fit	AKT serine/threonine kinase 3
chr15_-_30323833 Show fit	7.66	ENSRNOT00000071631	AABR07017714.1 Links NCBI RGD Ensembl Show fit
chr1_+_253221812 Show fit	7.13	ENSRNOT00000085880 ENSRNOT00000054753	Kif20b Links NCBI RGD Ensembl Show fit	kinesin family member 20B
chr15_-_45524582 Show fit	6.98	ENSRNOT00000081912	Gucy1b2 Links NCBI RGD Ensembl Show fit	guanylate cyclase 1 soluble subunit beta 2
chr4_-_69163881 Show fit	6.86	ENSRNOT00000048779	Tryx5 Links NCBI RGD Ensembl Show fit	trypsin X5
chr4_+_52199416 Show fit	6.85	ENSRNOT00000009537	Spam1 Links NCBI RGD Ensembl Show fit	sperm adhesion molecule 1
chr1_-_205630073 Show fit	6.62	ENSRNOT00000037064	Tex36 Links NCBI RGD Ensembl Show fit	testis expressed 36
chr3_+_80468154 Show fit	6.22	ENSRNOT00000021837	Ckap5 Links NCBI RGD Ensembl Show fit	cytoskeleton associated protein 5
chr3_+_148790979 Show fit	6.16	ENSRNOT00000085757	Kif3b Links NCBI RGD Ensembl Show fit	kinesin family member 3B
chr1_-_205669760 Show fit	6.09	ENSRNOT00000086703	Tex36 Links NCBI RGD Ensembl Show fit	testis expressed 36
chr15_-_88670349 Show fit	5.90	ENSRNOT00000012881	Rnf219 Links NCBI RGD Ensembl Show fit	ring finger protein 219
chr2_-_165591110 Show fit	5.85	ENSRNOT00000091140	Ift80 Links NCBI RGD Ensembl Show fit	intraflagellar transport 80
chr3_+_15379109 Show fit	5.83	ENSRNOT00000036495	Morn5 Links NCBI RGD Ensembl Show fit	MORN repeat containing 5
chr6_-_25507073 Show fit	5.81	ENSRNOT00000061176	Plb1 Links NCBI RGD Ensembl Show fit	phospholipase B1
chr14_-_3446611 Show fit	5.73	ENSRNOT00000080901	Brdt Links NCBI RGD Ensembl Show fit	bromodomain testis associated
chr1_+_81579736 Show fit	5.67	ENSRNOT00000071339	LOC100910611 Links NCBI RGD Ensembl Show fit	CD177 antigen-like
chr12_+_37878653 Show fit	5.65	ENSRNOT00000091084	Pitpnm2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol transfer protein, membrane-associated 2
chr3_+_150055749 Show fit	5.53	ENSRNOT00000055335	Actl10 Links NCBI RGD Ensembl Show fit	actin-like 10
chr1_+_156552328 Show fit	5.50	ENSRNOT00000055401	Dlg2 Links NCBI RGD Ensembl Show fit	discs large MAGUK scaffold protein 2
chr5_+_16845631 Show fit	5.40	ENSRNOT00000047889	Chchd7 Links NCBI RGD Ensembl Show fit	coiled-coil-helix-coiled-coil-helix domain containing 7
chr4_-_176596591 Show fit	5.36	ENSRNOT00000086365	Recql Links NCBI RGD Ensembl Show fit	RecQ like helicase
chr15_+_32012543 Show fit	5.34	ENSRNOT00000078174	AABR07017868.5 Links NCBI RGD Ensembl Show fit
chr14_+_81858737 Show fit	5.33	ENSRNOT00000029784 ENSRNOT00000058068 ENSRNOT00000058067	Poln Links NCBI RGD Ensembl Show fit	DNA polymerase nu
chrX_-_40086870 Show fit	5.27	ENSRNOT00000010027	Smpx Links NCBI RGD Ensembl Show fit	small muscle protein, X-linked
chr7_+_40217991 Show fit	5.26	ENSRNOT00000085684	Cep290 Links NCBI RGD Ensembl Show fit	centrosomal protein 290
chr19_-_37819789 Show fit	5.22	ENSRNOT00000036702	Cenpt Links NCBI RGD Ensembl Show fit	centromere protein T
chrX_+_29504349 Show fit	5.08	ENSRNOT00000005981	Tceanc Links NCBI RGD Ensembl Show fit	transcription elongation factor A N-terminal and central domain containing
chr1_+_106405002 Show fit	5.08	ENSRNOT00000074027	LOC103690168 Links NCBI RGD Ensembl Show fit	probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial
chr19_+_56220755 Show fit	5.06	ENSRNOT00000023452	Tubb3 Links NCBI RGD Ensembl Show fit	tubulin, beta 3 class III
chr1_+_82816984 Show fit	5.05	ENSRNOT00000074588	LOC100910611 Links NCBI RGD Ensembl Show fit	CD177 antigen-like
chr4_-_6046477 Show fit	5.00	ENSRNOT00000073925	Cct8l1 Links NCBI RGD Ensembl Show fit	chaperonin containing TCP1, subunit 8 (theta)-like 1
chr18_-_74478341 Show fit	4.99	ENSRNOT00000074572	Slc14a1 Links NCBI RGD Ensembl Show fit	solute carrier family 14 member 1
chr15_-_33285779 Show fit	4.99	ENSRNOT00000036150	Cdh24 Links NCBI RGD Ensembl Show fit	cadherin 24
chr19_+_38162515 Show fit	4.98	ENSRNOT00000027117	Slc7a6 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 6
chr10_-_17721233 Show fit	4.95	ENSRNOT00000031337	Smim23 Links NCBI RGD Ensembl Show fit	small integral membrane protein 23
chr1_+_82934134 Show fit	4.94	ENSRNOT00000072914	LOC100910611 Links NCBI RGD Ensembl Show fit	CD177 antigen-like
chr15_+_47455690 Show fit	4.90	ENSRNOT00000075276	LOC100910401 Links NCBI RGD Ensembl Show fit	serine protease 55-like
chr11_+_42936028 Show fit	4.86	ENSRNOT00000074653	AABR07033887.1 Links NCBI RGD Ensembl Show fit
chr4_+_22898527 Show fit	4.79	ENSRNOT00000072455 ENSRNOT00000076123	Dbf4 Links NCBI RGD Ensembl Show fit	DBF4 zinc finger
chr1_+_252497452 Show fit	4.74	ENSRNOT00000075598	Stambpl1 Links NCBI RGD Ensembl Show fit	STAM binding protein-like 1
chr1_-_189199376 Show fit	4.72	ENSRNOT00000021027	Umod Links NCBI RGD Ensembl Show fit	uromodulin
chr10_+_109950988 Show fit	4.68	ENSRNOT00000071293	LOC688321 Links NCBI RGD Ensembl Show fit	similar to Lung carbonyl reductase [NADPH] (NADPH-dependent carbonyl reductase) (LCR) (Adipocyte P27 protein) (AP27)
chr15_-_55209342 Show fit	4.57	ENSRNOT00000021752	Rb1 Links NCBI RGD Ensembl Show fit	RB transcriptional corepressor 1
chr4_+_160020472 Show fit	4.52	ENSRNOT00000078802	Parp11 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 11
chr7_+_27620458 Show fit	4.47	ENSRNOT00000059532	RGD1560034 Links NCBI RGD Ensembl Show fit	similar to FLJ25323 protein
chr10_+_72147816 Show fit	4.47	ENSRNOT00000090085	LOC102553386 Links NCBI RGD Ensembl Show fit	SUMO-conjugating enzyme UBC9-like
chr14_+_3204390 Show fit	4.46	ENSRNOT00000088078	Glmn Links NCBI RGD Ensembl Show fit	glomulin, FKBP associated protein
chr2_+_202200797 Show fit	4.41	ENSRNOT00000042263 ENSRNOT00000071938	Spag17 Links NCBI RGD Ensembl Show fit	sperm associated antigen 17
chr4_-_6062641 Show fit	4.38	ENSRNOT00000074846	Cct8l1 Links NCBI RGD Ensembl Show fit	chaperonin containing TCP1, subunit 8 (theta)-like 1
chr16_+_34795971 Show fit	4.27	ENSRNOT00000043510	LOC100912321 Links NCBI RGD Ensembl Show fit	myeloid-associated differentiation marker-like
chr8_-_78397123 Show fit	4.21	ENSRNOT00000087270 ENSRNOT00000084925	Tcf12 Links NCBI RGD Ensembl Show fit	transcription factor 12
chr11_+_53081025 Show fit	4.21	ENSRNOT00000002700	Bbx Links NCBI RGD Ensembl Show fit	BBX, HMG-box containing
chr3_-_112371664 Show fit	4.19	ENSRNOT00000079606 ENSRNOT00000012636	LOC100910478 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing protein 57-like
chr6_-_27460038 Show fit	4.14	ENSRNOT00000036815	Drc1 Links NCBI RGD Ensembl Show fit	dynein regulatory complex subunit 1
chr9_-_27761365 Show fit	4.14	ENSRNOT00000018552	Kcnq5 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily Q member 5
chr1_+_101410019 Show fit	4.09	ENSRNOT00000042039	Lhb Links NCBI RGD Ensembl Show fit	luteinizing hormone beta polypeptide
chr1_-_277867630 Show fit	3.93	ENSRNOT00000054679 ENSRNOT00000091038 ENSRNOT00000079869	Ablim1 Links NCBI RGD Ensembl Show fit	actin-binding LIM protein 1
chr7_-_58149061 Show fit	3.84	ENSRNOT00000005157	Tph2 Links NCBI RGD Ensembl Show fit	tryptophan hydroxylase 2
chr2_+_143895982 Show fit	3.81	ENSRNOT00000080026	Supt20h Links NCBI RGD Ensembl Show fit	SPT20 homolog, SAGA complex component
chr2_-_54963448 Show fit	3.78	ENSRNOT00000017886	Ptger4 Links NCBI RGD Ensembl Show fit	prostaglandin E receptor 4
chr16_+_56247659 Show fit	3.73	ENSRNOT00000017452	Tusc3 Links NCBI RGD Ensembl Show fit	tumor suppressor candidate 3
chr8_+_5606592 Show fit	3.71	ENSRNOT00000011727	Mmp12 Links NCBI RGD Ensembl Show fit	matrix metallopeptidase 12
chr1_-_277939039 Show fit	3.71	ENSRNOT00000079579 ENSRNOT00000086726	Ablim1 Links NCBI RGD Ensembl Show fit	actin-binding LIM protein 1
chr13_-_109770199 Show fit	3.69	ENSRNOT00000043672	Fam71a Links NCBI RGD Ensembl Show fit	family with sequence similarity 71, member A
chr14_+_100135271 Show fit	3.67	ENSRNOT00000032965	Fbxo48 Links NCBI RGD Ensembl Show fit	F-box protein 48
chr10_+_90985653 Show fit	3.63	ENSRNOT00000093364	Ccdc103 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 103
chr2_+_123791335 Show fit	3.63	ENSRNOT00000077096	Adad1 Links NCBI RGD Ensembl Show fit	adenosine deaminase domain containing 1
chr20_-_27578244 Show fit	3.62	ENSRNOT00000000708	Fam26d Links NCBI RGD Ensembl Show fit	family with sequence similarity 26, member D
chr15_+_31895223 Show fit	3.60	ENSRNOT00000092202	AABR07017855.1 Links NCBI RGD Ensembl Show fit
chr7_+_127964752 Show fit	3.60	ENSRNOT00000038168	RGD1560617 Links NCBI RGD Ensembl Show fit	hypothetical gene supported by NM_053561; AF062594
chr3_+_54734015 Show fit	3.56	ENSRNOT00000034341	LOC685184 Links NCBI RGD Ensembl Show fit	similar to protein expressed in prostate, ovary, testis, and placenta 8 isoform 2
chr10_+_11879418 Show fit	3.54	ENSRNOT00000068577	RGD1561796 Links NCBI RGD Ensembl Show fit	RGD1561796
chr9_-_27761733 Show fit	3.51	ENSRNOT00000040034	Kcnq5 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily Q member 5
chr4_+_159403501 Show fit	3.48	ENSRNOT00000086525	Akap3 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 3
chr9_-_15700235 Show fit	3.42	ENSRNOT00000088713 ENSRNOT00000035907	Trerf1 Links NCBI RGD Ensembl Show fit	transcriptional regulating factor 1
chr3_-_161294125 Show fit	3.41	ENSRNOT00000021143	Spata25 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 25
chr13_+_90723092 Show fit	3.41	ENSRNOT00000010146	Kcnj10 Links NCBI RGD Ensembl Show fit	ATP-sensitive inward rectifier potassium channel 10
chr13_-_82295123 Show fit	3.39	ENSRNOT00000090120	LOC498265 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ10706
chr20_-_399933 Show fit	3.37	ENSRNOT00000000953	Olr1671 Links NCBI RGD Ensembl Show fit	olfactory receptor 1671
chrX_-_158261717 Show fit	3.36	ENSRNOT00000086804	RGD1561558 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1700001F22
chr10_-_7029136 Show fit	3.35	ENSRNOT00000091942	AC129395.1 Links NCBI RGD Ensembl Show fit
chr17_-_57526461 Show fit	3.35	ENSRNOT00000072723	LOC103690053 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain-containing protein 26-like
chr9_-_81772851 Show fit	3.34	ENSRNOT00000032719	Usp37 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 37
chr1_+_101249522 Show fit	3.25	ENSRNOT00000033882	Slc6a16 Links NCBI RGD Ensembl Show fit	solute carrier family 6, member 16
chr2_-_137331140 Show fit	3.17	ENSRNOT00000048546	LOC365791 Links NCBI RGD Ensembl Show fit	similar to T-cell activation Rho GTPase-activating protein isoform b
chr8_-_50603591 Show fit	3.13	ENSRNOT00000077748	LOC500990 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4931429L15
chr14_+_7630482 Show fit	3.10	ENSRNOT00000091581	LOC498330 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC26744
chr1_-_82901917 Show fit	3.05	ENSRNOT00000035648	LOC102553892 Links NCBI RGD Ensembl Show fit	CD177 antigen-like
chr2_+_43271092 Show fit	3.04	ENSRNOT00000017571	Mier3 Links NCBI RGD Ensembl Show fit	mesoderm induction early response 1, family member 3
chr10_-_70181708 Show fit	3.00	ENSRNOT00000076598	Rffl Links NCBI RGD Ensembl Show fit	ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
chr3_+_146695344 Show fit	2.99	ENSRNOT00000010955	Gins1 Links NCBI RGD Ensembl Show fit	GINS complex subunit 1
chr3_-_112385528 Show fit	2.99	ENSRNOT00000049756	Lrrc57 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 57
chr18_+_70996044 Show fit	2.96	ENSRNOT00000024950 ENSRNOT00000066336	Dym Links NCBI RGD Ensembl Show fit	dymeclin
chr5_+_147714163 Show fit	2.95	ENSRNOT00000012663	Marcksl1 Links NCBI RGD Ensembl Show fit	MARCKS-like 1
chr17_+_85500113 Show fit	2.90	ENSRNOT00000091937	AABR07028768.1 Links NCBI RGD Ensembl Show fit
chr6_+_27887797 Show fit	2.89	ENSRNOT00000015827	Asxl2 Links NCBI RGD Ensembl Show fit	additional sex combs like 2, transcriptional regulator
chr2_-_39007976 Show fit	2.86	ENSRNOT00000064292	Zswim6 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 6
chr19_-_14945302 Show fit	2.78	ENSRNOT00000079391	AABR07042936.2 Links NCBI RGD Ensembl Show fit
chr5_+_135413275 Show fit	2.71	ENSRNOT00000012263	Gpbp1l1 Links NCBI RGD Ensembl Show fit	GC-rich promoter binding protein 1-like 1
chrX_-_124162058 Show fit	2.67	ENSRNOT00000071436	LOC367975 Links NCBI RGD Ensembl Show fit	similar to B-cell translocation gene 1
chr10_+_65161152 Show fit	2.65	ENSRNOT00000011608	Cryba1 Links NCBI RGD Ensembl Show fit	crystallin, beta A1
chrX_-_38468360 Show fit	2.54	ENSRNOT00000045285	Map7d2 Links NCBI RGD Ensembl Show fit	MAP7 domain containing 2
chr6_-_55698757 Show fit	2.54	ENSRNOT00000085146	Lrrc72 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 72
chr1_-_20962526 Show fit	2.54	ENSRNOT00000061332 ENSRNOT00000017322 ENSRNOT00000017412 ENSRNOT00000079688 ENSRNOT00000017417	Epb41l2 Links NCBI RGD Ensembl Show fit	erythrocyte membrane protein band 4.1-like 2
chr9_+_24066303 Show fit	2.53	ENSRNOT00000018163	Crisp3 Links NCBI RGD Ensembl Show fit	cysteine-rich secretory protein 3
chr5_-_133067245 Show fit	2.51	ENSRNOT00000033163	Skint10 Links NCBI RGD Ensembl Show fit	selection and upkeep of intraepithelial T cells 10
chr1_-_7480825 Show fit	2.50	ENSRNOT00000048754	Phactr2 Links NCBI RGD Ensembl Show fit	phosphatase and actin regulator 2
chr11_-_66759402 Show fit	2.49	ENSRNOT00000003326	Hcls1 Links NCBI RGD Ensembl Show fit	hematopoietic cell specific Lyn substrate 1
chr8_+_117600749 Show fit	2.49	ENSRNOT00000047482	Nckipsd Links NCBI RGD Ensembl Show fit	NCK interacting protein with SH3 domain
chrX_-_82699487 Show fit	2.49	ENSRNOT00000081625	Rps6ka6 Links NCBI RGD Ensembl Show fit	ribosomal protein S6 kinase A6
chr13_-_105684374 Show fit	2.47	ENSRNOT00000073142	Spata17 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 17
chr1_-_81559685 Show fit	2.43	ENSRNOT00000075282	LOC100909620 Links NCBI RGD Ensembl Show fit	CD177 antigen-like
chr12_+_12859661 Show fit	2.42	ENSRNOT00000001404	Usp42 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 42
chr13_-_15395617 Show fit	2.40	ENSRNOT00000046060	LOC304725 Links NCBI RGD Ensembl Show fit	similar to contactin associated protein-like 5 isoform 1
chr6_+_102477036 Show fit	2.38	ENSRNOT00000087132	Rad51b Links NCBI RGD Ensembl Show fit	RAD51 paralog B
chr1_-_99632845 Show fit	2.37	ENSRNOT00000049123	LOC103691107 Links NCBI RGD Ensembl Show fit	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 pseudogene
chr14_+_48726045 Show fit	2.34	ENSRNOT00000086646	Arap2 Links NCBI RGD Ensembl Show fit	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
chr20_-_1818800 Show fit	2.33	ENSRNOT00000000990	RT1-M3-1 Links NCBI RGD Ensembl Show fit	RT1 class Ib, locus M3, gene 1
chr12_+_19303387 Show fit	2.32	ENSRNOT00000001820	Cops6 Links NCBI RGD Ensembl Show fit	COP9 signalosome subunit 6
chr13_+_89524329 Show fit	2.32	ENSRNOT00000004279	Mpz Links NCBI RGD Ensembl Show fit	myelin protein zero
chr4_-_117531480 Show fit	2.29	ENSRNOT00000021120	Nat8f5 Links NCBI RGD Ensembl Show fit	N-acetyltransferase 8 (GCN5-related) family member 5
chr2_+_86914989 Show fit	2.29	ENSRNOT00000085164 ENSRNOT00000081966	LOC100360380 Links NCBI RGD Ensembl Show fit	zinc finger protein 457-like
chr9_+_71230108 Show fit	2.27	ENSRNOT00000018326	Creb1 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 1
chr15_-_70399924 Show fit	2.22	ENSRNOT00000087940	Diaph3 Links NCBI RGD Ensembl Show fit	diaphanous-related formin 3
chr6_+_26390689 Show fit	2.21	ENSRNOT00000079762 ENSRNOT00000091528	Ift172 Links NCBI RGD Ensembl Show fit	intraflagellar transport 172
chr7_-_116504853 Show fit	2.20	ENSRNOT00000056557	RGD1565410 Links NCBI RGD Ensembl Show fit	similar to Ly6-C antigen gene
chr18_-_36513317 Show fit	2.18	ENSRNOT00000025453	Plac8l1 Links NCBI RGD Ensembl Show fit	PLAC8-like 1
chr17_-_10439691 Show fit	2.15	ENSRNOT00000024151	Cdhr2 Links NCBI RGD Ensembl Show fit	cadherin-related family member 2
chr2_-_198942732 Show fit	2.10	ENSRNOT00000000109 ENSRNOT00000073913	Cd160 Links NCBI RGD Ensembl Show fit	CD160 molecule
chr15_+_2526368 Show fit	2.08	ENSRNOT00000048713 ENSRNOT00000074803	Dusp13 Links NCBI RGD Ensembl Show fit Dusp13 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 13 dual specificity phosphatase 13
chr3_-_21609853 Show fit	2.04	ENSRNOT00000012160	Pdcl Links NCBI RGD Ensembl Show fit	phosducin-like
chr1_+_255564409 Show fit	2.04	ENSRNOT00000081786	Btaf1 Links NCBI RGD Ensembl Show fit	B-TFIID TATA-box binding protein associated factor 1
chr2_-_49170025 Show fit	2.04	ENSRNOT00000060595	Parp8 Links NCBI RGD Ensembl Show fit	poly (ADP-ribose) polymerase family, member 8
chr1_+_30863217 Show fit	1.97	ENSRNOT00000015421	Rnf146 Links NCBI RGD Ensembl Show fit	ring finger protein 146
chr1_+_81372650 Show fit	1.91	ENSRNOT00000088829	Zfp428 Links NCBI RGD Ensembl Show fit	zinc finger protein 428
chr7_+_74350479 Show fit	1.90	ENSRNOT00000089034	AABR07057495.1 Links NCBI RGD Ensembl Show fit
chr3_+_101899068 Show fit	1.90	ENSRNOT00000079600 ENSRNOT00000006256	Muc15 Links NCBI RGD Ensembl Show fit	mucin 15, cell surface associated
chr19_-_56799445 Show fit	1.89	ENSRNOT00000024491	RGD1563991 Links NCBI RGD Ensembl Show fit	similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
chr8_-_39201588 Show fit	1.88	ENSRNOT00000011226	Stt3a Links NCBI RGD Ensembl Show fit	STT3A, catalytic subunit of the oligosaccharyltransferase complex
chr7_-_139542461 Show fit	1.86	ENSRNOT00000089425	Senp1 Links NCBI RGD Ensembl Show fit	SUMO1/sentrin specific peptidase 1
chr3_-_114728410 Show fit	1.82	ENSRNOT00000000181	Gatm Links NCBI RGD Ensembl Show fit	glycine amidinotransferase
chr4_-_129430251 Show fit	1.81	ENSRNOT00000067881	Fam19a4 Links NCBI RGD Ensembl Show fit	family with sequence similarity 19 member A4, C-C motif chemokine like
chr12_+_4546287 Show fit	1.81	ENSRNOT00000001416	Higd2al1 Links NCBI RGD Ensembl Show fit	HIG1 hypoxia inducible domain family, member 2A-like 1
chr15_+_31051414 Show fit	1.80	ENSRNOT00000090250	AABR07017783.4 Links NCBI RGD Ensembl Show fit
chr1_+_13595295 Show fit	1.80	ENSRNOT00000079250	Nhsl1 Links NCBI RGD Ensembl Show fit	NHS-like 1
chr20_+_34895059 Show fit	1.79	ENSRNOT00000084420	Asf1a Links NCBI RGD Ensembl Show fit	anti-silencing function 1A histone chaperone
chr12_-_47438931 Show fit	1.78	ENSRNOT00000050782	RGD1311899 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2210016L21 gene
chr7_-_68549763 Show fit	1.78	ENSRNOT00000078014	Slc16a7 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 7
chr9_-_65957101 Show fit	1.77	ENSRNOT00000014094	Mpp4 Links NCBI RGD Ensembl Show fit	membrane palmitoylated protein 4
chr18_+_87415531 Show fit	1.76	ENSRNOT00000072475	AABR07032888.1 Links NCBI RGD Ensembl Show fit
chr5_+_137546860 Show fit	1.76	ENSRNOT00000074431	Olr858 Links NCBI RGD Ensembl Show fit	olfactory receptor 858
chr11_+_87224421 Show fit	1.75	ENSRNOT00000000308	Dgcr14 Links NCBI RGD Ensembl Show fit	DiGeorge syndrome critical region gene 14
chr14_-_6284145 Show fit	1.74	ENSRNOT00000044065	Zfp951 Links NCBI RGD Ensembl Show fit	zinc finger protein 951
chr14_-_6358720 Show fit	1.74	ENSRNOT00000048419	Zfp951 Links NCBI RGD Ensembl Show fit	zinc finger protein 951
chr7_+_2645196 Show fit	1.74	ENSRNOT00000083899	Timeless Links NCBI RGD Ensembl Show fit	timeless circadian clock
chr1_-_165891627 Show fit	1.73	ENSRNOT00000038408	Relt Links NCBI RGD Ensembl Show fit	RELT tumor necrosis factor receptor
chr13_+_71110064 Show fit	1.64	ENSRNOT00000088329	Rgs8 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 8
chr5_+_8876044 Show fit	1.60	ENSRNOT00000008877	Cops5 Links NCBI RGD Ensembl Show fit	COP9 signalosome subunit 5
chr10_+_34414854 Show fit	1.59	ENSRNOT00000074980	LOC684471 Links NCBI RGD Ensembl Show fit	similar to olfactory receptor 1394
chrX_-_21945305 Show fit	1.58	ENSRNOT00000065084	Samt2 Links NCBI RGD Ensembl Show fit	spermatogenesis associated multipass transmembrane protein 2
chr8_-_48727154 Show fit	1.56	ENSRNOT00000088471	Trappc4 Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 4
chr9_-_82336806 Show fit	1.50	ENSRNOT00000024667	Slc23a3 Links NCBI RGD Ensembl Show fit	solute carrier family 23, member 3
chr18_+_15738809 Show fit	1.50	ENSRNOT00000075444	Mapre2 Links NCBI RGD Ensembl Show fit	microtubule-associated protein, RP/EB family, member 2
chr8_-_48726963 Show fit	1.44	ENSRNOT00000016145	Trappc4 Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 4
chr9_+_100885051 Show fit	1.43	ENSRNOT00000082987	AC109427.1 Links NCBI RGD Ensembl Show fit
chr1_-_67065797 Show fit	1.42	ENSRNOT00000048152	Vom1r46 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 46
chr18_+_3163214 Show fit	1.39	ENSRNOT00000017291	Rbbp8 Links NCBI RGD Ensembl Show fit	RB binding protein 8, endonuclease
chr1_-_66639205 Show fit	1.36	ENSRNOT00000082190	LOC100909481 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 3 subunit E-like
chr4_-_118487633 Show fit	1.36	ENSRNOT00000068093	Gmcl1 Links NCBI RGD Ensembl Show fit	germ cell-less, spermatogenesis associated 1
chr12_-_30304036 Show fit	1.35	ENSRNOT00000001218	Nupr2 Links NCBI RGD Ensembl Show fit	nuclear protein 2, transcriptional regulator
chr3_-_111266542 Show fit	1.33	ENSRNOT00000031672	Ino80 Links NCBI RGD Ensembl Show fit	INO80 complex subunit
chr2_-_231877307 Show fit	1.31	ENSRNOT00000073860	Larp7 Links NCBI RGD Ensembl Show fit	La ribonucleoprotein domain family, member 7
chr6_+_125876109 Show fit	1.26	ENSRNOT00000091300	Cpsf2 Links NCBI RGD Ensembl Show fit	cleavage and polyadenylation specific factor 2
chr2_-_144808245 Show fit	1.24	ENSRNOT00000087849	LOC102552324 Links NCBI RGD Ensembl Show fit	uncharacterized LOC102552324
chr17_-_42226377 Show fit	1.22	ENSRNOT00000024536	RGD1307443 Links NCBI RGD Ensembl Show fit	similar to mKIAA0319 protein
chr6_+_83083740 Show fit	1.18	ENSRNOT00000007600	Lrfn5 Links NCBI RGD Ensembl Show fit	leucine rich repeat and fibronectin type III domain containing 5
chr8_+_17928358 Show fit	1.16	ENSRNOT00000029911	Mbd3l2 Links NCBI RGD Ensembl Show fit	methyl-CpG binding domain protein 3-like 2
chr5_+_139783951 Show fit	1.15	ENSRNOT00000081333	Rims3 Links NCBI RGD Ensembl Show fit	regulating synaptic membrane exocytosis 3
chr2_+_189714754 Show fit	1.15	ENSRNOT00000086285	Gatad2b Links NCBI RGD Ensembl Show fit	GATA zinc finger domain containing 2B

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.4	7.1	GO:1902412	regulation of mitotic cytokinesis(GO:1902412)
1.9	5.7	GO:0051037	regulation of transcription involved in meiotic cell cycle(GO:0051037)
1.9	11.3	GO:0060718	chorionic trophoblast cell differentiation(GO:0060718)
1.6	13.2	GO:0001920	negative regulation of receptor recycling(GO:0001920)
1.5	4.6	GO:1903943	establishment of sister chromatid cohesion(GO:0034085) cohesin loading(GO:0071921) regulation of cohesin loading(GO:0071922) regulation of hepatocyte apoptotic process(GO:1903943) negative regulation of hepatocyte apoptotic process(GO:1903944)
1.3	3.8	GO:2000417	negative regulation of eosinophil migration(GO:2000417)
1.2	9.9	GO:0051388	positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
1.2	4.7	GO:0072218	ascending thin limb development(GO:0072021) metanephric ascending thin limb development(GO:0072218)
1.2	8.3	GO:0000022	mitotic spindle elongation(GO:0000022) mitotic spindle midzone assembly(GO:0051256)
1.1	3.4	GO:0051933	amino acid neurotransmitter reuptake(GO:0051933) glutamate reuptake(GO:0051935)
1.1	4.4	GO:1904158	axonemal central apparatus assembly(GO:1904158)
1.0	6.2	GO:0030951	establishment or maintenance of microtubule cytoskeleton polarity(GO:0030951)
0.9	3.7	GO:1902741	type I interferon secretion(GO:0072641) interferon-alpha secretion(GO:0072642) regulation of interferon-alpha secretion(GO:1902739) positive regulation of interferon-alpha secretion(GO:1902741)
0.8	5.0	GO:0071918	urea transmembrane transport(GO:0071918)
0.8	2.3	GO:0002477	antigen processing and presentation of exogenous peptide antigen via MHC class Ib(GO:0002477) antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent(GO:0002481)
0.8	2.3	GO:0032916	positive regulation of transforming growth factor beta3 production(GO:0032916)
0.6	5.8	GO:2000051	negative regulation of non-canonical Wnt signaling pathway(GO:2000051)
0.6	3.8	GO:0042427	serotonin biosynthetic process(GO:0042427) primary amino compound biosynthetic process(GO:1901162)
0.6	3.8	GO:0035948	positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter(GO:0035948)
0.6	2.5	GO:0042531	regulation of tyrosine phosphorylation of STAT protein(GO:0042509) positive regulation of tyrosine phosphorylation of STAT protein(GO:0042531)
0.6	5.8	GO:2000344	positive regulation of acrosome reaction(GO:2000344)
0.6	1.7	GO:1904976	cellular response to bleomycin(GO:1904976)
0.5	6.8	GO:0007342	fusion of sperm to egg plasma membrane(GO:0007342)
0.5	2.0	GO:0061084	negative regulation of protein refolding(GO:0061084)
0.5	3.0	GO:2001271	negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:2001271)
0.5	5.5	GO:0046710	GDP metabolic process(GO:0046710)
0.5	2.9	GO:1900157	regulation of bone mineralization involved in bone maturation(GO:1900157)
0.5	1.8	GO:1990402	embryonic liver development(GO:1990402)
0.4	5.4	GO:0000733	DNA strand renaturation(GO:0000733)
0.4	5.2	GO:0051382	kinetochore assembly(GO:0051382)
0.4	2.1	GO:1904970	brush border assembly(GO:1904970)
0.4	5.3	GO:0019985	translesion synthesis(GO:0019985)
0.4	2.7	GO:2000210	positive regulation of anoikis(GO:2000210)
0.4	3.6	GO:0071907	determination of digestive tract left/right asymmetry(GO:0071907)
0.4	3.9	GO:0000338	protein deneddylation(GO:0000338)
0.4	1.1	GO:1902071	regulation of hypoxia-inducible factor-1alpha signaling pathway(GO:1902071)
0.3	4.5	GO:0045086	positive regulation of interleukin-2 biosynthetic process(GO:0045086)
0.3	5.9	GO:0048026	positive regulation of mRNA splicing, via spliceosome(GO:0048026)
0.3	0.9	GO:0046671	regulation of nitrogen utilization(GO:0006808) nitrogen utilization(GO:0019740) negative regulation of retinal cell programmed cell death(GO:0046671) cellular response to fluoride(GO:1902618)
0.3	21.1	GO:0034605	cellular response to heat(GO:0034605)
0.3	2.5	GO:2000381	negative regulation of mesoderm development(GO:2000381)
0.3	7.7	GO:0045793	positive regulation of cell size(GO:0045793)
0.3	3.4	GO:0035562	negative regulation of chromatin binding(GO:0035562)
0.3	3.3	GO:0035871	protein K11-linked deubiquitination(GO:0035871)
0.3	3.0	GO:1902969	mitotic DNA replication(GO:1902969)
0.3	2.0	GO:0035735	intraciliary transport involved in cilium morphogenesis(GO:0035735)
0.3	1.1	GO:0071651	regulation of acute inflammatory response to non-antigenic stimulus(GO:0002877) positive regulation of chemokine (C-C motif) ligand 5 production(GO:0071651)
0.3	1.9	GO:0043686	co-translational protein modification(GO:0043686)
0.3	2.7	GO:2000271	positive regulation of fibroblast apoptotic process(GO:2000271)
0.3	3.7	GO:0015693	magnesium ion transport(GO:0015693) magnesium ion transmembrane transport(GO:1903830)
0.3	1.9	GO:0010724	regulation of definitive erythrocyte differentiation(GO:0010724)
0.3	9.5	GO:0006458	'de novo' protein folding(GO:0006458)
0.2	11.7	GO:0048247	lymphocyte chemotaxis(GO:0048247)
0.2	0.5	GO:0001831	trophectodermal cellular morphogenesis(GO:0001831)
0.2	1.4	GO:0035188	blastocyst hatching(GO:0001835) hatching(GO:0035188) organism emergence from protective structure(GO:0071684)
0.2	1.3	GO:0010571	positive regulation of nuclear cell cycle DNA replication(GO:0010571)
0.2	1.3	GO:0006398	mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.2	1.0	GO:0019563	glycerol catabolic process(GO:0019563)
0.2	4.1	GO:0001539	cilium or flagellum-dependent cell motility(GO:0001539) cilium-dependent cell motility(GO:0060285)
0.2	0.6	GO:0032066	nucleolus to nucleoplasm transport(GO:0032066)
0.2	2.6	GO:0045217	cell-cell junction maintenance(GO:0045217)
0.2	2.2	GO:0061525	hindgut development(GO:0061525)
0.2	0.5	GO:1902595	regulation of DNA replication origin binding(GO:1902595)
0.2	0.9	GO:0001574	ganglioside biosynthetic process(GO:0001574)
0.2	5.1	GO:0006099	tricarboxylic acid cycle(GO:0006099)
0.2	0.5	GO:0009099	branched-chain amino acid biosynthetic process(GO:0009082) leucine biosynthetic process(GO:0009098) valine biosynthetic process(GO:0009099)
0.2	1.6	GO:0060159	regulation of dopamine receptor signaling pathway(GO:0060159)
0.2	9.5	GO:0002763	positive regulation of myeloid leukocyte differentiation(GO:0002763)
0.1	11.1	GO:0046068	cGMP metabolic process(GO:0046068)
0.1	6.2	GO:0032467	positive regulation of cytokinesis(GO:0032467)
0.1	4.2	GO:0010738	regulation of protein kinase A signaling(GO:0010738)
0.1	0.7	GO:0031860	telomeric 3' overhang formation(GO:0031860)
0.1	5.5	GO:0045494	photoreceptor cell maintenance(GO:0045494)
0.1	0.8	GO:1903608	protein localization to cytoplasmic stress granule(GO:1903608)
0.1	5.0	GO:1902475	L-alpha-amino acid transmembrane transport(GO:1902475)
0.1	0.6	GO:0046725	negative regulation by virus of viral protein levels in host cell(GO:0046725)
0.1	2.1	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle(GO:0010971)
0.1	8.8	GO:0006986	response to unfolded protein(GO:0006986)
0.1	0.4	GO:0046878	positive regulation of saliva secretion(GO:0046878)
0.1	1.1	GO:0021902	commitment of neuronal cell to specific neuron type in forebrain(GO:0021902)
0.1	8.0	GO:0030032	lamellipodium assembly(GO:0030032)
0.1	4.5	GO:0016925	protein sumoylation(GO:0016925)
0.1	1.0	GO:1901407	regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901407) positive regulation of phosphorylation of RNA polymerase II C-terminal domain(GO:1901409)
0.1	7.6	GO:0051028	mRNA transport(GO:0051028)
0.1	2.5	GO:0030866	cortical actin cytoskeleton organization(GO:0030866)
0.1	1.0	GO:0042135	neurotransmitter catabolic process(GO:0042135)
0.1	1.4	GO:0001731	formation of translation preinitiation complex(GO:0001731)
0.1	1.4	GO:0071157	negative regulation of cell cycle arrest(GO:0071157)
0.1	4.9	GO:1902117	positive regulation of organelle assembly(GO:1902117)
0.1	3.2	GO:0003333	amino acid transmembrane transport(GO:0003333)
0.1	2.3	GO:0001702	gastrulation with mouth forming second(GO:0001702)
0.1	1.8	GO:0034723	DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.1	0.3	GO:1904430	mitotic telomere maintenance via semi-conservative replication(GO:1902990) negative regulation of t-circle formation(GO:1904430)
0.1	0.3	GO:0044314	protein K27-linked ubiquitination(GO:0044314)
0.1	0.7	GO:0097240	telomere tethering at nuclear periphery(GO:0034398) meiotic telomere tethering at nuclear periphery(GO:0044821) meiotic attachment of telomere to nuclear envelope(GO:0070197) chromosome attachment to the nuclear envelope(GO:0097240)
0.1	0.2	GO:0060988	lipid tube assembly(GO:0060988)
0.1	0.8	GO:2000650	negative regulation of sodium ion transmembrane transport(GO:1902306) negative regulation of sodium ion transmembrane transporter activity(GO:2000650)
0.1	2.0	GO:0006998	nuclear envelope organization(GO:0006998)
0.1	0.1	GO:0061357	positive regulation of Wnt protein secretion(GO:0061357)
0.1	0.9	GO:0031297	replication fork processing(GO:0031297)
0.1	0.5	GO:0002118	aggressive behavior(GO:0002118)
0.0	2.3	GO:0051931	regulation of sensory perception of pain(GO:0051930) regulation of sensory perception(GO:0051931)
0.0	0.5	GO:0060044	negative regulation of cardiac muscle cell proliferation(GO:0060044)
0.0	2.1	GO:0050829	defense response to Gram-negative bacterium(GO:0050829)
0.0	0.2	GO:0031119	tRNA pseudouridine synthesis(GO:0031119)
0.0	2.2	GO:0048791	calcium ion-regulated exocytosis of neurotransmitter(GO:0048791)
0.0	1.2	GO:2000171	negative regulation of dendrite development(GO:2000171)
0.0	0.5	GO:0090161	Golgi ribbon formation(GO:0090161)
0.0	0.4	GO:0008343	adult feeding behavior(GO:0008343)
0.0	5.0	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156)
0.0	1.6	GO:2001222	regulation of neuron migration(GO:2001222)
0.0	2.0	GO:0090263	protein autoubiquitination(GO:0051865) positive regulation of canonical Wnt signaling pathway(GO:0090263)
0.0	0.6	GO:0001956	positive regulation of neurotransmitter secretion(GO:0001956)
0.0	1.7	GO:0033209	tumor necrosis factor-mediated signaling pathway(GO:0033209)
0.0	0.5	GO:1901663	ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663)
0.0	1.1	GO:0043044	ATP-dependent chromatin remodeling(GO:0043044)
0.0	1.0	GO:0000387	spliceosomal snRNP assembly(GO:0000387)
0.0	4.0	GO:0006941	striated muscle contraction(GO:0006941)
0.0	6.1	GO:0071804	cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0	0.6	GO:0072661	protein targeting to plasma membrane(GO:0072661)
0.0	2.4	GO:0016358	dendrite development(GO:0016358)
0.0	0.2	GO:1900425	negative regulation of defense response to bacterium(GO:1900425)
0.0	0.1	GO:1901475	pyruvate transmembrane transport(GO:1901475)
0.0	0.2	GO:0006488	dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0	2.4	GO:0016579	protein deubiquitination(GO:0016579)
0.0	1.2	GO:0035418	protein localization to synapse(GO:0035418)
0.0	0.2	GO:0048280	vesicle fusion with Golgi apparatus(GO:0048280)
0.0	0.4	GO:0007413	axonal fasciculation(GO:0007413)
0.0	0.6	GO:0030488	tRNA methylation(GO:0030488)
0.0	0.3	GO:0031167	rRNA methylation(GO:0031167)
0.0	0.2	GO:0009642	response to light intensity(GO:0009642)
0.0	0.5	GO:0071353	cellular response to interleukin-4(GO:0071353)
0.0	1.8	GO:0007601	visual perception(GO:0007601) sensory perception of light stimulus(GO:0050953)
0.0	1.4	GO:0007030	Golgi organization(GO:0007030)
0.0	0.3	GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0	1.1	GO:0010923	negative regulation of phosphatase activity(GO:0010923)
0.0	4.7	GO:0045666	positive regulation of neuron differentiation(GO:0045666)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.2	6.2	GO:0016939	kinesin II complex(GO:0016939)
1.1	2.1	GO:0089717	spanning component of plasma membrane(GO:0044214) spanning component of membrane(GO:0089717)
1.1	5.3	GO:0005927	muscle tendon junction(GO:0005927)
1.0	3.0	GO:0000811	GINS complex(GO:0000811)
0.9	4.4	GO:1990716	axonemal central apparatus(GO:1990716)
0.8	2.3	GO:0032398	MHC class Ib protein complex(GO:0032398)
0.8	4.6	GO:0035189	Rb-E2F complex(GO:0035189)
0.8	2.3	GO:1990589	ATF4-CREB1 transcription factor complex(GO:1990589)
0.8	3.0	GO:0002947	tumor necrosis factor receptor superfamily complex(GO:0002947)
0.7	13.2	GO:0042101	T cell receptor complex(GO:0042101)
0.7	9.5	GO:0005832	chaperonin-containing T-complex(GO:0005832)
0.6	11.5	GO:0000930	gamma-tubulin complex(GO:0000930)
0.5	2.4	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.5	7.1	GO:1990023	mitotic spindle pole(GO:0097431) mitotic spindle midzone(GO:1990023)
0.4	4.5	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.4	2.2	GO:0097598	sperm cytoplasmic droplet(GO:0097598)
0.3	5.5	GO:0044224	juxtaparanode region of axon(GO:0044224)
0.3	5.6	GO:0008250	oligosaccharyltransferase complex(GO:0008250)
0.3	3.8	GO:0000124	SAGA complex(GO:0000124)
0.3	7.0	GO:0008074	guanylate cyclase complex, soluble(GO:0008074)
0.3	2.2	GO:0030891	VCB complex(GO:0030891)
0.2	3.0	GO:0030008	TRAPP complex(GO:0030008)
0.2	5.8	GO:0030992	intraciliary transport particle B(GO:0030992)
0.2	8.9	GO:0008180	COP9 signalosome(GO:0008180)
0.2	3.5	GO:0035686	sperm fibrous sheath(GO:0035686)
0.2	1.0	GO:0009331	glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2	5.2	GO:0000788	nuclear nucleosome(GO:0000788)
0.2	3.4	GO:0097449	astrocyte projection(GO:0097449)
0.2	1.4	GO:0033290	eukaryotic 43S preinitiation complex(GO:0016282) eukaryotic 48S preinitiation complex(GO:0033290)
0.2	1.0	GO:0034715	pICln-Sm protein complex(GO:0034715)
0.2	8.3	GO:0045171	intercellular bridge(GO:0045171)
0.1	2.5	GO:0042581	specific granule(GO:0042581)
0.1	13.1	GO:0031225	anchored component of membrane(GO:0031225)
0.1	8.3	GO:0005643	nuclear pore(GO:0005643)
0.1	2.0	GO:0000242	pericentriolar material(GO:0000242)
0.1	0.7	GO:0030870	Mre11 complex(GO:0030870)
0.1	5.9	GO:0030118	clathrin coat(GO:0030118)
0.1	0.9	GO:0071821	FANCM-MHF complex(GO:0071821)
0.1	0.7	GO:0034991	nuclear meiotic cohesin complex(GO:0034991)
0.1	0.8	GO:0072669	tRNA-splicing ligase complex(GO:0072669)
0.1	7.6	GO:0001725	stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517)
0.1	1.3	GO:0031011	Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.1	6.6	GO:0031526	brush border membrane(GO:0031526)
0.1	7.7	GO:0005814	centriole(GO:0005814)
0.1	0.3	GO:0036449	microtubule minus-end(GO:0036449)
0.1	4.5	GO:0000118	histone deacetylase complex(GO:0000118)
0.1	1.5	GO:1990752	microtubule end(GO:1990752)
0.0	4.1	GO:0097014	axoneme(GO:0005930) ciliary plasm(GO:0097014)
0.0	1.6	GO:0032809	neuronal cell body membrane(GO:0032809)
0.0	0.8	GO:0005922	connexon complex(GO:0005922)
0.0	4.2	GO:0090575	RNA polymerase II transcription factor complex(GO:0090575)
0.0	0.9	GO:0030687	preribosome, large subunit precursor(GO:0030687)
0.0	7.8	GO:0005667	transcription factor complex(GO:0005667)
0.0	1.4	GO:0017053	transcriptional repressor complex(GO:0017053)
0.0	1.0	GO:0016592	mediator complex(GO:0016592)
0.0	0.2	GO:0097209	epidermal lamellar body(GO:0097209)
0.0	0.7	GO:0032839	dendrite cytoplasm(GO:0032839)
0.0	6.4	GO:0031965	nuclear membrane(GO:0031965)
0.0	0.1	GO:0030015	CCR4-NOT core complex(GO:0030015)
0.0	2.5	GO:0001650	fibrillar center(GO:0001650)
0.0	0.6	GO:0005891	voltage-gated calcium channel complex(GO:0005891)
0.0	0.4	GO:0042629	mast cell granule(GO:0042629)
0.0	0.6	GO:0030134	ER to Golgi transport vesicle(GO:0030134)
0.0	0.2	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0	0.5	GO:0031201	SNARE complex(GO:0031201)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.9	5.8	GO:0050253	retinyl-palmitate esterase activity(GO:0050253)
1.5	4.5	GO:0005171	hepatocyte growth factor receptor binding(GO:0005171)
1.3	5.1	GO:0004449	isocitrate dehydrogenase (NAD+) activity(GO:0004449)
1.2	5.0	GO:0015265	urea channel activity(GO:0015265)
1.0	15.4	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.9	4.6	GO:0061676	importin-alpha family protein binding(GO:0061676)
0.9	5.4	GO:0009378	four-way junction helicase activity(GO:0009378)
0.9	3.4	GO:0015272	ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.8	2.3	GO:1990763	arrestin family protein binding(GO:1990763)
0.7	6.8	GO:0004415	hyalurononglucosaminidase activity(GO:0004415)
0.5	5.5	GO:0004385	guanylate kinase activity(GO:0004385)
0.5	3.8	GO:0016714	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen(GO:0016714)
0.5	3.8	GO:0004957	prostaglandin E receptor activity(GO:0004957)
0.5	2.5	GO:0042731	PH domain binding(GO:0042731)
0.5	5.6	GO:0051011	microtubule minus-end binding(GO:0051011)
0.4	5.6	GO:0004579	oligosaccharyl transferase activity(GO:0004576) dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579)
0.4	4.7	GO:0019864	IgG binding(GO:0019864)
0.4	5.0	GO:0070097	alpha-catenin binding(GO:0045294) delta-catenin binding(GO:0070097)
0.4	1.1	GO:0005502	11-cis retinal binding(GO:0005502)
0.4	1.9	GO:0070137	ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.4	4.2	GO:0004000	adenosine deaminase activity(GO:0004000)
0.3	1.0	GO:0052591	sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity(GO:0052590) sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity(GO:0052591)
0.3	5.3	GO:0008409	5'-3' exonuclease activity(GO:0008409)
0.3	3.0	GO:0043138	3'-5' DNA helicase activity(GO:0043138)
0.3	4.2	GO:0035497	cAMP response element binding(GO:0035497)
0.3	9.5	GO:0044183	protein binding involved in protein folding(GO:0044183)
0.3	11.7	GO:0008009	chemokine activity(GO:0008009) CCR chemokine receptor binding(GO:0048020)
0.3	2.0	GO:0008479	queuine tRNA-ribosyltransferase activity(GO:0008479)
0.3	7.0	GO:0004383	guanylate cyclase activity(GO:0004383)
0.2	4.5	GO:0019789	SUMO transferase activity(GO:0019789)
0.2	8.3	GO:0008536	Ran GTPase binding(GO:0008536)
0.2	5.7	GO:0070577	lysine-acetylated histone binding(GO:0070577)
0.2	2.1	GO:0000014	single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.2	4.5	GO:0003950	NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.2	0.5	GO:0052656	branched-chain-amino-acid transaminase activity(GO:0004084) L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2	0.9	GO:0051434	BH3 domain binding(GO:0051434)
0.1	2.4	GO:0000400	four-way junction DNA binding(GO:0000400)
0.1	0.6	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity(GO:0016428)
0.1	0.6	GO:0033149	FFAT motif binding(GO:0033149)
0.1	2.9	GO:0042975	peroxisome proliferator activated receptor binding(GO:0042975)
0.1	2.7	GO:0005212	structural constituent of eye lens(GO:0005212)
0.1	3.2	GO:0005328	neurotransmitter:sodium symporter activity(GO:0005328)
0.1	0.3	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1	5.2	GO:0005080	protein kinase C binding(GO:0005080)
0.1	7.4	GO:0004843	thiol-dependent ubiquitin-specific protease activity(GO:0004843)
0.1	6.2	GO:0003777	microtubule motor activity(GO:0003777)
0.1	2.5	GO:0004864	protein phosphatase inhibitor activity(GO:0004864)
0.1	1.7	GO:0005031	tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.1	0.5	GO:0035033	histone deacetylase regulator activity(GO:0035033)
0.1	5.0	GO:0015179	L-amino acid transmembrane transporter activity(GO:0015179)
0.1	7.6	GO:0005249	voltage-gated potassium channel activity(GO:0005249)
0.1	1.8	GO:0016769	transferase activity, transferring nitrogenous groups(GO:0016769)
0.1	3.0	GO:0017112	Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1	9.0	GO:0001078	transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078)
0.1	2.3	GO:0042605	peptide antigen binding(GO:0042605)
0.1	1.3	GO:0043014	alpha-tubulin binding(GO:0043014)
0.1	2.3	GO:0005547	phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547)
0.0	0.8	GO:0008143	poly(A) binding(GO:0008143)
0.0	1.6	GO:0001965	G-protein alpha-subunit binding(GO:0001965)
0.0	6.8	GO:0042393	histone binding(GO:0042393)
0.0	3.0	GO:0002039	p53 binding(GO:0002039)
0.0	1.1	GO:0031492	nucleosomal DNA binding(GO:0031492)
0.0	0.1	GO:0031852	mu-type opioid receptor binding(GO:0031852)
0.0	0.7	GO:0034236	protein kinase A catalytic subunit binding(GO:0034236)
0.0	1.1	GO:0005184	neuropeptide hormone activity(GO:0005184)
0.0	1.0	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0	0.6	GO:0008331	high voltage-gated calcium channel activity(GO:0008331)
0.0	0.6	GO:0005388	calcium-transporting ATPase activity(GO:0005388)
0.0	0.5	GO:0000993	RNA polymerase II core binding(GO:0000993)
0.0	2.3	GO:0008080	N-acetyltransferase activity(GO:0008080)
0.0	0.1	GO:0050833	pyruvate transmembrane transporter activity(GO:0050833)
0.0	1.0	GO:0004180	carboxypeptidase activity(GO:0004180)
0.0	1.9	GO:0005518	collagen binding(GO:0005518)
0.0	0.8	GO:0008200	ion channel inhibitor activity(GO:0008200)
0.0	0.7	GO:0005484	SNAP receptor activity(GO:0005484)
0.0	0.3	GO:0070182	DNA polymerase binding(GO:0070182)
0.0	1.0	GO:0003743	translation initiation factor activity(GO:0003743)
0.0	4.8	GO:0003924	GTPase activity(GO:0003924)
0.0	1.0	GO:0005201	extracellular matrix structural constituent(GO:0005201)
0.0	0.2	GO:0009982	pseudouridine synthase activity(GO:0009982)
0.0	0.1	GO:0070016	armadillo repeat domain binding(GO:0070016)
0.0	1.7	GO:0005179	hormone activity(GO:0005179)
0.0	0.3	GO:0050681	androgen receptor binding(GO:0050681)
0.0	0.3	GO:0017147	Wnt-protein binding(GO:0017147)
0.0	0.3	GO:0001103	RNA polymerase II repressing transcription factor binding(GO:0001103)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.4	7.7	SA PTEN PATHWAY	PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate.
0.2	10.2	PID ECADHERIN STABILIZATION PATHWAY	Stabilization and expansion of the E-cadherin adherens junction
0.2	8.5	PID ILK PATHWAY	Integrin-linked kinase signaling
0.1	2.7	PID HIF1A PATHWAY	Hypoxic and oxygen homeostasis regulation of HIF-1-alpha
0.1	1.7	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.1	0.9	SA FAS SIGNALING	The TNF-type receptor Fas induces apoptosis on ligand binding.
0.1	3.7	PID UPA UPAR PATHWAY	Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.1	2.3	PID ARF6 PATHWAY	Arf6 signaling events
0.1	6.0	PID E2F PATHWAY	E2F transcription factor network
0.0	1.6	PID SYNDECAN 2 PATHWAY	Syndecan-2-mediated signaling events
0.0	3.0	PID TNF PATHWAY	TNF receptor signaling pathway
0.0	2.5	PID FCER1 PATHWAY	Fc-epsilon receptor I signaling in mast cells
0.0	12.2	NABA SECRETED FACTORS	Genes encoding secreted soluble factors
0.0	2.3	PID HDAC CLASSI PATHWAY	Signaling events mediated by HDAC Class I
0.0	1.9	PID AR TF PATHWAY	Regulation of Androgen receptor activity
0.0	1.0	PID ATM PATHWAY	ATM pathway
0.0	2.2	PID ERBB1 DOWNSTREAM PATHWAY	ErbB1 downstream signaling
0.0	0.2	PID ARF 3PATHWAY	Arf1 pathway
0.0	0.3	PID KIT PATHWAY	Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.0	7.7	REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK	Genes involved in Negative regulation of the PI3K/AKT network
0.5	3.8	REACTOME PROSTANOID LIGAND RECEPTORS	Genes involved in Prostanoid ligand receptors
0.5	13.2	REACTOME DOWNSTREAM TCR SIGNALING	Genes involved in Downstream TCR signaling
0.5	14.4	REACTOME KINESINS	Genes involved in Kinesins
0.4	4.1	REACTOME GLYCOPROTEIN HORMONES	Genes involved in Glycoprotein hormones
0.3	7.6	REACTOME DCC MEDIATED ATTRACTIVE SIGNALING	Genes involved in DCC mediated attractive signaling
0.3	8.3	REACTOME TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS	Genes involved in Transport of Ribonucleoproteins into the Host Nucleus
0.3	5.1	REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY	Genes involved in Post-chaperonin tubulin folding pathway
0.3	3.8	REACTOME AMINE DERIVED HORMONES	Genes involved in Amine-derived hormones
0.3	3.0	REACTOME UNWINDING OF DNA	Genes involved in Unwinding of DNA
0.3	4.6	REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1	Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1
0.2	4.8	REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX	Genes involved in Activation of the pre-replicative complex
0.2	11.7	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.2	13.5	REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES	Genes involved in Loss of Nlp from mitotic centrosomes
0.2	1.9	REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS	Genes involved in Termination of O-glycan biosynthesis
0.2	5.0	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
0.2	5.0	REACTOME BASIGIN INTERACTIONS	Genes involved in Basigin interactions
0.2	4.8	REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF RAS	Genes involved in CREB phosphorylation through the activation of Ras
0.1	7.6	REACTOME VOLTAGE GATED POTASSIUM CHANNELS	Genes involved in Voltage gated Potassium channels
0.1	5.0	REACTOME AMINE COMPOUND SLC TRANSPORTERS	Genes involved in Amine compound SLC transporters
0.1	1.3	REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT	Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.1	1.0	REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS	Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.1	0.4	REACTOME AUTODEGRADATION OF THE E3 UBIQUITIN LIGASE COP1	Genes involved in Autodegradation of the E3 ubiquitin ligase COP1
0.1	3.4	REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS	Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.1	2.9	REACTOME MYOGENESIS	Genes involved in Myogenesis
0.1	1.5	REACTOME ACTIVATION OF BH3 ONLY PROTEINS	Genes involved in Activation of BH3-only proteins
0.1	5.2	REACTOME MITOTIC PROMETAPHASE	Genes involved in Mitotic Prometaphase
0.1	1.1	REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA	Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha
0.0	0.8	REACTOME GAP JUNCTION ASSEMBLY	Genes involved in Gap junction assembly
0.0	0.9	REACTOME FANCONI ANEMIA PATHWAY	Genes involved in Fanconi Anemia pathway
0.0	2.1	REACTOME MEIOTIC RECOMBINATION	Genes involved in Meiotic Recombination
0.0	1.1	REACTOME GLUCAGON TYPE LIGAND RECEPTORS	Genes involved in Glucagon-type ligand receptors
0.0	2.4	REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION	Genes involved in Factors involved in megakaryocyte development and platelet production
0.0	0.5	REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM	Genes involved in Branched-chain amino acid catabolism
0.0	0.5	REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS	Genes involved in Proteolytic cleavage of SNARE complex proteins
0.0	0.6	REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS	Genes involved in Sphingolipid de novo biosynthesis
0.0	0.6	REACTOME ION TRANSPORT BY P TYPE ATPASES	Genes involved in Ion transport by P-type ATPases
0.0	0.1	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
0.0	1.0	REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION	Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.0	1.7	REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES	Genes involved in Metabolism of amino acids and derivatives