GSE53960: rat RNA-Seq transcriptomic Bodymap

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Rora Links NCBI RGD Ensembl	ENSRNOG00000027145	RAR-related orphan receptor A

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Rora	rn6_v1_chr8_+_75516904_75516904	0.14	1.3e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_101687855 Show fit	19.87	ENSRNOT00000028546 ENSRNOT00000091597	Dbp Links NCBI RGD Ensembl Show fit	D-box binding PAR bZIP transcription factor
chr19_-_10653800 Show fit	12.48	ENSRNOT00000022128	Cx3cl1 Links NCBI RGD Ensembl Show fit	C-X3-C motif chemokine ligand 1
chr3_-_113525864 Show fit	10.53	ENSRNOT00000046659	Frmd5 Links NCBI RGD Ensembl Show fit	FERM domain containing 5
chr8_-_82533689 Show fit	10.16	ENSRNOT00000014124	Tmod2 Links NCBI RGD Ensembl Show fit	tropomodulin 2
chr3_+_113319456 Show fit	10.09	ENSRNOT00000051354	Ckmt1 Links NCBI RGD Ensembl Show fit	creatine kinase, mitochondrial 1
chr7_-_81592206 Show fit	9.97	ENSRNOT00000007979	Angpt1 Links NCBI RGD Ensembl Show fit	angiopoietin 1
chr10_-_86688730 Show fit	9.25	ENSRNOT00000055333	Nr1d1 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 1, group D, member 1
chr6_-_136145837 Show fit	8.76	ENSRNOT00000015122	Ckb Links NCBI RGD Ensembl Show fit	creatine kinase B
chr18_-_1946840 Show fit	8.48	ENSRNOT00000041878	Abhd3 Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 3
chr13_-_86451002 Show fit	7.91	ENSRNOT00000043004 ENSRNOT00000027996	Pbx1 Links NCBI RGD Ensembl Show fit	PBX homeobox 1
chr12_+_47024442 Show fit	7.77	ENSRNOT00000001545	Cox6a1 Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 6A1
chr14_-_114583122 Show fit	7.69	ENSRNOT00000084595	Sptbn1 Links NCBI RGD Ensembl Show fit	spectrin, beta, non-erythrocytic 1
chr5_-_147412705 Show fit	7.50	ENSRNOT00000010688	RGD1561149 Links NCBI RGD Ensembl Show fit	similar to mKIAA1522 protein
chr8_-_47404010 Show fit	7.38	ENSRNOT00000038647	Tmem136 Links NCBI RGD Ensembl Show fit	transmembrane protein 136
chr13_+_34610684 Show fit	7.08	ENSRNOT00000093019 ENSRNOT00000003280	Tfcp2l1 Links NCBI RGD Ensembl Show fit	transcription factor CP2-like 1
chr9_+_61692154 Show fit	7.04	ENSRNOT00000082300	Hspe1 Links NCBI RGD Ensembl Show fit	heat shock protein family E member 1
chr3_+_8534440 Show fit	6.91	ENSRNOT00000045827 ENSRNOT00000082672	Sptan1 Links NCBI RGD Ensembl Show fit	spectrin, alpha, non-erythrocytic 1
chr1_+_199555722 Show fit	6.64	ENSRNOT00000054983	Itgax Links NCBI RGD Ensembl Show fit	integrin subunit alpha X
chr18_+_2416871 Show fit	6.52	ENSRNOT00000081399	Gata6 Links NCBI RGD Ensembl Show fit	GATA binding protein 6
chr2_-_210282352 Show fit	6.44	ENSRNOT00000075653	Slc6a17 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 17
chr3_+_151126591 Show fit	6.35	ENSRNOT00000025859	Myh7b Links NCBI RGD Ensembl Show fit	myosin heavy chain 7B
chr18_+_2416552 Show fit	6.30	ENSRNOT00000030726	Gata6 Links NCBI RGD Ensembl Show fit	GATA binding protein 6
chr19_+_568287 Show fit	6.18	ENSRNOT00000016419	Cdh16 Links NCBI RGD Ensembl Show fit	cadherin 16
chr9_-_61690956 Show fit	6.13	ENSRNOT00000066589	Hspd1 Links NCBI RGD Ensembl Show fit	heat shock protein family D member 1
chr10_+_55712043 Show fit	6.12	ENSRNOT00000010141	Aloxe3 Links NCBI RGD Ensembl Show fit	arachidonate lipoxygenase 3
chr1_+_197659187 Show fit	6.10	ENSRNOT00000082228	LOC103690016 Links NCBI RGD Ensembl Show fit	serine/threonine-protein kinase SBK1
chr5_-_157268903 Show fit	6.09	ENSRNOT00000022716	Pla2g5 Links NCBI RGD Ensembl Show fit	phospholipase A2, group V
chr7_+_53630621 Show fit	5.99	ENSRNOT00000067011 ENSRNOT00000080598	Csrp2 Links NCBI RGD Ensembl Show fit	cysteine and glycine-rich protein 2
chr8_+_71167305 Show fit	5.69	ENSRNOT00000021337	Rbpms2 Links NCBI RGD Ensembl Show fit	RNA binding protein with multiple splicing 2
chr1_+_72882806 Show fit	5.52	ENSRNOT00000024640	Tnni3 Links NCBI RGD Ensembl Show fit	troponin I3, cardiac type
chr3_-_146396299 Show fit	5.39	ENSRNOT00000040188 ENSRNOT00000008931	Apmap Links NCBI RGD Ensembl Show fit	adipocyte plasma membrane associated protein
chr6_+_106496992 Show fit	5.38	ENSRNOT00000086136 ENSRNOT00000058181	Rgs6 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 6
chr12_+_40018937 Show fit	5.32	ENSRNOT00000001697	Cux2 Links NCBI RGD Ensembl Show fit	cut-like homeobox 2
chr1_-_170404056 Show fit	5.04	ENSRNOT00000024402	Apbb1 Links NCBI RGD Ensembl Show fit	amyloid beta precursor protein binding family B member 1
chrX_-_135342996 Show fit	4.97	ENSRNOT00000084848 ENSRNOT00000008503	Aifm1 Links NCBI RGD Ensembl Show fit	apoptosis inducing factor, mitochondria associated 1
chr2_-_56679955 Show fit	4.90	ENSRNOT00000016722	Egflam Links NCBI RGD Ensembl Show fit	EGF-like, fibronectin type III and laminin G domains
chr12_+_47698947 Show fit	4.86	ENSRNOT00000001586	Trpv4 Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily V, member 4
chr5_+_147069616 Show fit	4.77	ENSRNOT00000072908	Trim62 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 62
chr9_+_2202511 Show fit	4.62	ENSRNOT00000017556	Satb1 Links NCBI RGD Ensembl Show fit	SATB homeobox 1
chr1_-_124803363 Show fit	4.53	ENSRNOT00000066380	Klf13 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 13
chr20_-_14545772 Show fit	4.44	ENSRNOT00000001766	Bcr Links NCBI RGD Ensembl Show fit	BCR, RhoGEF and GTPase activating protein
chr8_+_33239139 Show fit	4.20	ENSRNOT00000011589	Arhgap32 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 32
chr3_-_81304181 Show fit	4.16	ENSRNOT00000079746	Mapk8ip1 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 8 interacting protein 1
chr7_+_143810892 Show fit	4.15	ENSRNOT00000016240	Znf740 Links NCBI RGD Ensembl Show fit	zinc finger protein 740
chr1_-_265542276 Show fit	4.13	ENSRNOT00000065172	Mgea5 Links NCBI RGD Ensembl Show fit	meningioma expressed antigen 5 (hyaluronidase)
chr6_-_36819821 Show fit	4.08	ENSRNOT00000006499	Kcns3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel, modifier subfamily S, member 3
chr18_-_3555711 Show fit	3.92	ENSRNOT00000029274	Tmem241 Links NCBI RGD Ensembl Show fit	transmembrane protein 241
chr2_+_239415046 Show fit	3.89	ENSRNOT00000072196	Cxxc4 Links NCBI RGD Ensembl Show fit	CXXC finger protein 4
chrX_+_68774699 Show fit	3.78	ENSRNOT00000081662	Stard8 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 8
chr1_+_198682230 Show fit	3.62	ENSRNOT00000023995	Znf48 Links NCBI RGD Ensembl Show fit	zinc finger protein 48
chr11_+_61531571 Show fit	3.47	ENSRNOT00000093467 ENSRNOT00000002727	Atp6v1a Links NCBI RGD Ensembl Show fit	ATPase H+ transporting V1 subunit A
chr5_+_150754021 Show fit	3.44	ENSRNOT00000017687	Ptafr Links NCBI RGD Ensembl Show fit	platelet-activating factor receptor
chr10_+_29165577 Show fit	3.31	ENSRNOT00000078415	Ccnjl Links NCBI RGD Ensembl Show fit	cyclin J-like
chr7_+_121311024 Show fit	3.29	ENSRNOT00000092260 ENSRNOT00000023066 ENSRNOT00000081377	Syngr1 Links NCBI RGD Ensembl Show fit	synaptogyrin 1
chr4_+_157836912 Show fit	3.29	ENSRNOT00000067271	Scnn1a Links NCBI RGD Ensembl Show fit	sodium channel epithelial 1 alpha subunit
chr14_-_106393670 Show fit	3.24	ENSRNOT00000011429	Mdh1 Links NCBI RGD Ensembl Show fit	malate dehydrogenase 1
chr8_+_48443767 Show fit	3.20	ENSRNOT00000010127	C1qtnf5 Links NCBI RGD Ensembl Show fit	C1q and tumor necrosis factor related protein 5
chr14_+_88549947 Show fit	3.16	ENSRNOT00000086177	Hnrnpc Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein C
chr9_+_10471742 Show fit	3.15	ENSRNOT00000072276	Safb2 Links NCBI RGD Ensembl Show fit	scaffold attachment factor B2
chr4_-_77706994 Show fit	3.15	ENSRNOT00000038517	Zfp777 Links NCBI RGD Ensembl Show fit	zinc finger protein 777
chr7_+_123102493 Show fit	3.15	ENSRNOT00000038612	Aco2 Links NCBI RGD Ensembl Show fit	aconitase 2
chrX_+_54734385 Show fit	3.11	ENSRNOT00000005023	Nr0b1 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 0, group B, member 1
chr3_+_154905141 Show fit	3.10	ENSRNOT00000088748 ENSRNOT00000020556	Ralgapb Links NCBI RGD Ensembl Show fit	Ral GTPase activating protein non-catalytic beta subunit
chr6_-_3355339 Show fit	3.07	ENSRNOT00000084602	Map4k3 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 3
chr18_+_30856847 Show fit	3.03	ENSRNOT00000027019	AABR07031734.1 Links NCBI RGD Ensembl Show fit
chr7_-_12424367 Show fit	2.97	ENSRNOT00000060698	Midn Links NCBI RGD Ensembl Show fit	midnolin
chr5_+_74766636 Show fit	2.94	ENSRNOT00000030913	Rn50_5_0791.1 Links NCBI RGD Ensembl Show fit
chr19_-_42920344 Show fit	2.92	ENSRNOT00000019408 ENSRNOT00000068594	Zfhx3 Links NCBI RGD Ensembl Show fit	zinc finger homeobox 3
chr3_-_150156839 Show fit	2.88	ENSRNOT00000036217	LOC103691939 Links NCBI RGD Ensembl Show fit	elongation factor 1-alpha 1 pseudogene
chr8_+_39878955 Show fit	2.85	ENSRNOT00000060300	LOC100911068 Links NCBI RGD Ensembl Show fit	roundabout homolog 4-like
chr10_-_90240509 Show fit	2.82	ENSRNOT00000028407	Atxn7l3 Links NCBI RGD Ensembl Show fit	ataxin 7-like 3
chr3_+_125320680 Show fit	2.79	ENSRNOT00000028891	LOC681292 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC681292
chr3_+_156727642 Show fit	2.72	ENSRNOT00000078909	Plcg1 Links NCBI RGD Ensembl Show fit	phospholipase C, gamma 1
chr14_+_81362618 Show fit	2.71	ENSRNOT00000017386	Mfsd10 Links NCBI RGD Ensembl Show fit	major facilitator superfamily domain containing 10
chr3_+_123731539 Show fit	2.61	ENSRNOT00000051064	Cdc25b Links NCBI RGD Ensembl Show fit	cell division cycle 25B
chr1_-_53087474 Show fit	2.59	ENSRNOT00000017302	Ccr6 Links NCBI RGD Ensembl Show fit	C-C motif chemokine receptor 6
chr20_+_3351303 Show fit	2.59	ENSRNOT00000080419 ENSRNOT00000001065 ENSRNOT00000086503	Atat1 Links NCBI RGD Ensembl Show fit	alpha tubulin acetyltransferase 1
chr4_+_145413230 Show fit	2.58	ENSRNOT00000056508	Il17re Links NCBI RGD Ensembl Show fit	interleukin 17 receptor E
chr1_-_70003582 Show fit	2.57	ENSRNOT00000055721	Usp29 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 29
chr5_-_164348713 Show fit	2.57	ENSRNOT00000087044	LOC500584 Links NCBI RGD Ensembl Show fit	similar to casein kinase 1, gamma 3 isoform 2
chr17_-_15094805 Show fit	2.57	ENSRNOT00000044073	Fbxw17 Links NCBI RGD Ensembl Show fit	F-box and WD-40 domain protein 17
chr3_+_155297566 Show fit	2.51	ENSRNOT00000021435 ENSRNOT00000084866	Dhx35 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 35
chr7_-_70480724 Show fit	2.46	ENSRNOT00000090057	Dtx3 Links NCBI RGD Ensembl Show fit	deltex E3 ubiquitin ligase 3
chr1_-_187779675 Show fit	2.44	ENSRNOT00000024648	Arl6ip1 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor like GTPase 6 interacting protein 1
chr10_-_88356538 Show fit	2.43	ENSRNOT00000022430	Nt5c3b Links NCBI RGD Ensembl Show fit	5'-nucleotidase, cytosolic IIIB
chr6_+_12362813 Show fit	2.40	ENSRNOT00000022370	Ston1 Links NCBI RGD Ensembl Show fit	stonin 1
chr11_+_61531416 Show fit	2.35	ENSRNOT00000093263	Atp6v1a Links NCBI RGD Ensembl Show fit	ATPase H+ transporting V1 subunit A
chr16_-_69242028 Show fit	2.35	ENSRNOT00000019002	Zfp703 Links NCBI RGD Ensembl Show fit	zinc finger protein 703
chr10_-_59888198 Show fit	2.35	ENSRNOT00000093482 ENSRNOT00000049311 ENSRNOT00000093230	Aspa Links NCBI RGD Ensembl Show fit	aspartoacylase
chr3_-_93789617 Show fit	2.32	ENSRNOT00000078616	Caprin1 Links NCBI RGD Ensembl Show fit	cell cycle associated protein 1
chr1_-_221041401 Show fit	2.31	ENSRNOT00000064136	Pcnx3 Links NCBI RGD Ensembl Show fit	pecanex homolog 3 (Drosophila)
chr10_-_896938 Show fit	2.31	ENSRNOT00000086392	Nde1 Links NCBI RGD Ensembl Show fit	nudE neurodevelopment protein 1
chrX_-_74847379 Show fit	2.31	ENSRNOT00000067009	NEWGENE_1559832 Links NCBI RGD Ensembl Show fit	ring finger protein, LIM domain interacting
chr6_-_76552559 Show fit	2.25	ENSRNOT00000065230	Ralgapa1 Links NCBI RGD Ensembl Show fit	Ral GTPase activating protein catalytic alpha subunit 1
chr16_-_32753278 Show fit	2.24	ENSRNOT00000015759	Mfap3l Links NCBI RGD Ensembl Show fit	microfibrillar-associated protein 3-like
chr20_-_4817146 Show fit	2.23	ENSRNOT00000080174	Ddx39b Links NCBI RGD Ensembl Show fit	DExD-box helicase 39B
chr1_-_134870255 Show fit	2.20	ENSRNOT00000055829	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chr3_-_133894569 Show fit	2.20	ENSRNOT00000084221	AABR07053968.1 Links NCBI RGD Ensembl Show fit
chr2_+_28460068 Show fit	2.19	ENSRNOT00000066819	Foxd1 Links NCBI RGD Ensembl Show fit	forkhead box D1
chr8_+_36125999 Show fit	2.17	ENSRNOT00000013036 ENSRNOT00000088046	Kirrel3 Links NCBI RGD Ensembl Show fit	kin of IRRE like 3 (Drosophila)
chr2_-_111793326 Show fit	2.17	ENSRNOT00000092660	Nlgn1 Links NCBI RGD Ensembl Show fit	neuroligin 1
chr1_+_221773254 Show fit	2.11	ENSRNOT00000028646	Rasgrp2 Links NCBI RGD Ensembl Show fit	RAS guanyl releasing protein 2
chr1_-_73732118 Show fit	2.10	ENSRNOT00000077964	Leng8 Links NCBI RGD Ensembl Show fit	leukocyte receptor cluster member 8
chr7_+_120755516 Show fit	2.08	ENSRNOT00000056169	Kdelr3 Links NCBI RGD Ensembl Show fit	KDEL endoplasmic reticulum protein retention receptor 3
chr1_+_85460888 Show fit	2.08	ENSRNOT00000093384	Supt5h Links NCBI RGD Ensembl Show fit	SPT5 homolog, DSIF elongation factor subunit
chr8_+_39305128 Show fit	2.06	ENSRNOT00000008285	Fez1 Links NCBI RGD Ensembl Show fit	fasciculation and elongation protein zeta 1
chr3_+_147609095 Show fit	2.03	ENSRNOT00000041456	Srxn1 Links NCBI RGD Ensembl Show fit	sulfiredoxin 1
chr20_-_13657943 Show fit	2.03	ENSRNOT00000032290	Vpreb3 Links NCBI RGD Ensembl Show fit	pre-B lymphocyte 3
chr5_-_101138427 Show fit	2.00	ENSRNOT00000058615	Frem1 Links NCBI RGD Ensembl Show fit	Fras1 related extracellular matrix 1
chr16_-_81243757 Show fit	1.99	ENSRNOT00000024677	Gas6 Links NCBI RGD Ensembl Show fit	growth arrest specific 6
chr2_-_113345577 Show fit	1.99	ENSRNOT00000034096	Fndc3b Links NCBI RGD Ensembl Show fit	fibronectin type III domain containing 3B
chr8_+_48094673 Show fit	1.98	ENSRNOT00000008614	Nectin1 Links NCBI RGD Ensembl Show fit	nectin cell adhesion molecule 1
chr3_-_60765645 Show fit	1.97	ENSRNOT00000050513	Atf2 Links NCBI RGD Ensembl Show fit	activating transcription factor 2
chr2_-_238803024 Show fit	1.97	ENSRNOT00000046775	Tet2 Links NCBI RGD Ensembl Show fit	tet methylcytosine dioxygenase 2
chr10_-_5260608 Show fit	1.92	ENSRNOT00000003572	Ciita Links NCBI RGD Ensembl Show fit	class II, major histocompatibility complex, transactivator
chr3_+_113257688 Show fit	1.91	ENSRNOT00000019320	Map1a Links NCBI RGD Ensembl Show fit	microtubule-associated protein 1A
chr20_-_5618254 Show fit	1.87	ENSRNOT00000092326 ENSRNOT00000000576	Bak1 Links NCBI RGD Ensembl Show fit	BCL2-antagonist/killer 1
chr10_-_82963919 Show fit	1.86	ENSRNOT00000005807	Dlx4 Links NCBI RGD Ensembl Show fit	distal-less homeobox 4
chr8_-_116965396 Show fit	1.86	ENSRNOT00000042528	Bsn Links NCBI RGD Ensembl Show fit	bassoon (presynaptic cytomatrix protein)
chr13_-_78521911 Show fit	1.85	ENSRNOT00000087506	Rabgap1l Links NCBI RGD Ensembl Show fit	RAB GTPase activating protein 1-like
chr9_-_93404883 Show fit	1.78	ENSRNOT00000025024	Nmur1 Links NCBI RGD Ensembl Show fit	neuromedin U receptor 1
chr1_+_80954858 Show fit	1.76	ENSRNOT00000030440	Zfp112 Links NCBI RGD Ensembl Show fit	zinc finger protein 112
chr1_-_91588609 Show fit	1.72	ENSRNOT00000050931	Snrpg Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide G
chr10_-_88357025 Show fit	1.69	ENSRNOT00000080006	Nt5c3b Links NCBI RGD Ensembl Show fit	5'-nucleotidase, cytosolic IIIB
chr3_+_14304591 Show fit	1.68	ENSRNOT00000007776	Cntrl Links NCBI RGD Ensembl Show fit	centriolin
chr15_-_37030240 Show fit	1.62	ENSRNOT00000028219 ENSRNOT00000088037	Pspc1 Links NCBI RGD Ensembl Show fit	paraspeckle component 1
chr15_-_86142672 Show fit	1.61	ENSRNOT00000057830	Commd6 Links NCBI RGD Ensembl Show fit	COMM domain containing 6
chr20_+_29831314 Show fit	1.54	ENSRNOT00000000696	Psap Links NCBI RGD Ensembl Show fit	prosaposin
chr2_+_38230757 Show fit	1.50	ENSRNOT00000048598	RGD1564606 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L23a
chr1_-_213973163 Show fit	1.50	ENSRNOT00000024867	LOC100911402 Links NCBI RGD Ensembl Show fit	cell cycle exit and neuronal differentiation protein 1-like
chr7_+_73273985 Show fit	1.43	ENSRNOT00000077730	Pop1 Links NCBI RGD Ensembl Show fit	POP1 homolog, ribonuclease P/MRP subunit
chr14_+_76732650 Show fit	1.42	ENSRNOT00000088197	Clnk Links NCBI RGD Ensembl Show fit	cytokine-dependent hematopoietic cell linker
chr5_+_138300107 Show fit	1.40	ENSRNOT00000047151	Cldn19 Links NCBI RGD Ensembl Show fit	claudin 19
chr4_+_152449270 Show fit	1.39	ENSRNOT00000076733	Rad52 Links NCBI RGD Ensembl Show fit	RAD52 homolog, DNA repair protein
chr14_-_44375804 Show fit	1.36	ENSRNOT00000042825	LOC100362751 Links NCBI RGD Ensembl Show fit	ribosomal protein P2-like
chr10_+_61685241 Show fit	1.35	ENSRNOT00000092606	Mnt Links NCBI RGD Ensembl Show fit	MAX network transcriptional repressor
chr8_+_114867062 Show fit	1.30	ENSRNOT00000074771	Wdr82 Links NCBI RGD Ensembl Show fit	WD repeat domain 82
chr8_+_29453643 Show fit	1.30	ENSRNOT00000090643	Opcml Links NCBI RGD Ensembl Show fit	opioid binding protein/cell adhesion molecule-like
chr17_+_86066833 Show fit	1.24	ENSRNOT00000022661	Msrb2 Links NCBI RGD Ensembl Show fit	methionine sulfoxide reductase B2
chr1_+_87066289 Show fit	1.23	ENSRNOT00000027645	Capn12 Links NCBI RGD Ensembl Show fit	calpain 12
chr1_-_78968329 Show fit	1.22	ENSRNOT00000023078	Ppp5c Links NCBI RGD Ensembl Show fit	protein phosphatase 5, catalytic subunit
chr5_+_144701949 Show fit	1.20	ENSRNOT00000015618	Psmb2 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 2
chr1_+_61374379 Show fit	1.19	ENSRNOT00000015343	Zfp53 Links NCBI RGD Ensembl Show fit	zinc finger protein 53
chr8_-_133128290 Show fit	1.19	ENSRNOT00000008783	Ccr1l1 Links NCBI RGD Ensembl Show fit	chemokine (C-C motif) receptor 1-like 1
chr12_-_30566032 Show fit	1.17	ENSRNOT00000093378	Gbas Links NCBI RGD Ensembl Show fit	glioblastoma amplified sequence
chr10_+_59000397 Show fit	1.14	ENSRNOT00000021134	Mybbp1a Links NCBI RGD Ensembl Show fit	MYB binding protein 1a
chr20_+_28572242 Show fit	1.09	ENSRNOT00000072485	Sh3rf3 Links NCBI RGD Ensembl Show fit	SH3 domain containing ring finger 3
chr18_-_31430973 Show fit	1.08	ENSRNOT00000026065	Pcdh12 Links NCBI RGD Ensembl Show fit	protocadherin 12
chr1_+_224882439 Show fit	1.00	ENSRNOT00000024785	Chrm1 Links NCBI RGD Ensembl Show fit	cholinergic receptor, muscarinic 1
chr1_-_64175099 Show fit	1.00	ENSRNOT00000091288	Ndufa3 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit A3
chr10_-_104748003 Show fit	0.98	ENSRNOT00000042372 ENSRNOT00000046754	Acox1 Links NCBI RGD Ensembl Show fit	acyl-CoA oxidase 1
chr4_-_145487426 Show fit	0.94	ENSRNOT00000013488	Emc3 Links NCBI RGD Ensembl Show fit	ER membrane protein complex subunit 3
chr3_-_153952108 Show fit	0.94	ENSRNOT00000050465	Adig Links NCBI RGD Ensembl Show fit	adipogenin
chr10_-_15155412 Show fit	0.91	ENSRNOT00000026536	Haghl Links NCBI RGD Ensembl Show fit	hydroxyacylglutathione hydrolase-like
chr10_+_82032656 Show fit	0.87	ENSRNOT00000067751	Ankrd40 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 40
chr17_-_90315492 Show fit	0.86	ENSRNOT00000070807	Gng4 Links NCBI RGD Ensembl Show fit	G protein subunit gamma 4
chr18_+_70733872 Show fit	0.85	ENSRNOT00000067018	Acaa2 Links NCBI RGD Ensembl Show fit	acetyl-CoA acyltransferase 2
chr6_-_143195143 Show fit	0.85	ENSRNOT00000081337	AABR07065837.1 Links NCBI RGD Ensembl Show fit
chr17_+_45247776 Show fit	0.83	ENSRNOT00000081063 ENSRNOT00000080655	Zkscan3 Links NCBI RGD Ensembl Show fit	zinc finger with KRAB and SCAN domains 3
chr10_-_14247886 Show fit	0.75	ENSRNOT00000020504	Nubp2 Links NCBI RGD Ensembl Show fit	nucleotide binding protein 2
chr13_-_71282802 Show fit	0.75	ENSRNOT00000025544	Rgsl2h Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling like 2 homolog (mouse)
chr10_+_110893232 Show fit	0.74	ENSRNOT00000072190	Metrnl Links NCBI RGD Ensembl Show fit	meteorin-like, glial cell differentiation regulator
chr6_-_135049728 Show fit	0.74	ENSRNOT00000009556	Hsp90aa1 Links NCBI RGD Ensembl Show fit	heat shock protein 90 alpha family class A member 1
chr12_-_46718355 Show fit	0.72	ENSRNOT00000030031	Rab35 Links NCBI RGD Ensembl Show fit	RAB35, member RAS oncogene family
chr20_+_9586075 Show fit	0.70	ENSRNOT00000001527 ENSRNOT00000079509	Glp1r Links NCBI RGD Ensembl Show fit	glucagon-like peptide 1 receptor
chr8_+_104106740 Show fit	0.66	ENSRNOT00000015015	Tfdp2 Links NCBI RGD Ensembl Show fit	transcription factor Dp-2
chr6_-_107678156 Show fit	0.62	ENSRNOT00000014158	Elmsan1 Links NCBI RGD Ensembl Show fit	ELM2 and Myb/SANT domain containing 1
chr10_-_85517683 Show fit	0.61	ENSRNOT00000016070	Srcin1 Links NCBI RGD Ensembl Show fit	SRC kinase signaling inhibitor 1
chr3_+_117853999 Show fit	0.59	ENSRNOT00000042949	LOC100911847 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S14-like
chr1_-_219853329 Show fit	0.58	ENSRNOT00000026169	Lrfn4 Links NCBI RGD Ensembl Show fit	leucine rich repeat and fibronectin type III domain containing 4
chr4_+_82637411 Show fit	0.57	ENSRNOT00000048225	LOC685406 Links NCBI RGD Ensembl Show fit	LRRGT00062
chr13_-_85622314 Show fit	0.57	ENSRNOT00000005719	Mgst3 Links NCBI RGD Ensembl Show fit	microsomal glutathione S-transferase 3
chr7_+_98432024 Show fit	0.53	ENSRNOT00000091077	Fer1l6 Links NCBI RGD Ensembl Show fit	fer-1-like family member 6
chr12_+_30441055 Show fit	0.53	ENSRNOT00000081099	AABR07036007.1 Links NCBI RGD Ensembl Show fit
chr4_+_170958196 Show fit	0.52	ENSRNOT00000007905	Pde6h Links NCBI RGD Ensembl Show fit	phosphodiesterase 6H
chrX_-_78911601 Show fit	0.52	ENSRNOT00000003188	RGD1566265 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2610002M06
chr1_-_62191818 Show fit	0.50	ENSRNOT00000033187	AABR07001926.1 Links NCBI RGD Ensembl Show fit
chr3_+_73366155 Show fit	0.49	ENSRNOT00000044979	Olr473 Links NCBI RGD Ensembl Show fit	olfactory receptor 473
chr8_-_48449311 Show fit	0.42	ENSRNOT00000010134	Rnf26 Links NCBI RGD Ensembl Show fit	ring finger protein 26
chr8_+_59164572 Show fit	0.41	ENSRNOT00000015102	Idh3a Links NCBI RGD Ensembl Show fit	isocitrate dehydrogenase 3 (NAD+) alpha
chr1_-_170927957 Show fit	0.38	ENSRNOT00000049686	Olr218 Links NCBI RGD Ensembl Show fit	olfactory receptor 218
chr1_-_126211439 Show fit	0.36	ENSRNOT00000014988	Tjp1 Links NCBI RGD Ensembl Show fit	tight junction protein 1
chr6_-_143195445 Show fit	0.35	ENSRNOT00000078672	AABR07065837.1 Links NCBI RGD Ensembl Show fit
chr18_-_63185510 Show fit	0.34	ENSRNOT00000024632	Afg3l2 Links NCBI RGD Ensembl Show fit	AFG3 like matrix AAA peptidase subunit 2
chr14_-_105069565 Show fit	0.34	ENSRNOT00000067365	AABR07016578.1 Links NCBI RGD Ensembl Show fit
chr10_+_29123273 Show fit	0.30	ENSRNOT00000005171	Ccnjl Links NCBI RGD Ensembl Show fit	cyclin J-like
chr3_+_94549180 Show fit	0.27	ENSRNOT00000016318	Cstf3 Links NCBI RGD Ensembl Show fit	cleavage stimulation factor subunit 3
chr5_-_59149625 Show fit	0.23	ENSRNOT00000040641 ENSRNOT00000084216	Spag8 Links NCBI RGD Ensembl Show fit	sperm associated antigen 8
chr7_-_114590119 Show fit	0.21	ENSRNOT00000079599	Ptk2 Links NCBI RGD Ensembl Show fit	protein tyrosine kinase 2
chr2_+_252305874 Show fit	0.17	ENSRNOT00000020972	Ctbs Links NCBI RGD Ensembl Show fit	chitobiase
chr18_+_29587901 Show fit	0.12	ENSRNOT00000085470	Wdr55 Links NCBI RGD Ensembl Show fit	WD repeat domain 55
chr19_+_25095089 Show fit	0.11	ENSRNOT00000041717	Prkaca Links NCBI RGD Ensembl Show fit	protein kinase cAMP-activated catalytic subunit alpha
chrX_-_113474164 Show fit	0.08	ENSRNOT00000046804	Gucy2f Links NCBI RGD Ensembl Show fit	guanylate cyclase 2F
chr3_-_60813869 Show fit	0.08	ENSRNOT00000058234	Atp5g3 Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
chr16_+_1979191 Show fit	0.06	ENSRNOT00000014382	Ppif Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase F
chr8_-_40122450 Show fit	0.04	ENSRNOT00000039729	Tbrg1 Links NCBI RGD Ensembl Show fit	transforming growth factor beta regulator 1
chr3_+_21313227 Show fit	0.01	ENSRNOT00000036335	LOC690140 Links NCBI RGD Ensembl Show fit	similar to olfactory receptor Olr1374

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
4.3	12.8	GO:0007493	endodermal cell fate determination(GO:0007493) negative regulation of transforming growth factor beta2 production(GO:0032912)
3.3	10.0	GO:0048014	Tie signaling pathway(GO:0048014)
3.1	9.2	GO:0060086	circadian temperature homeostasis(GO:0060086)
2.1	6.4	GO:0015820	leucine transport(GO:0015820)
2.1	12.5	GO:0032914	positive regulation of transforming growth factor beta1 production(GO:0032914)
2.0	6.1	GO:0002840	T cell mediated immune response to tumor cell(GO:0002424) regulation of T cell mediated immune response to tumor cell(GO:0002840) protein import into mitochondrial intermembrane space(GO:0045041)
2.0	6.1	GO:0006663	platelet activating factor biosynthetic process(GO:0006663)
1.6	4.9	GO:0072566	hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477) regulation of macrophage inflammatory protein 1 alpha production(GO:0071640) chemokine (C-X-C motif) ligand 1 production(GO:0072566) regulation of chemokine (C-X-C motif) ligand 1 production(GO:2000338)
1.5	4.4	GO:0043314	negative regulation of neutrophil degranulation(GO:0043314)
1.3	10.2	GO:0051694	pointed-end actin filament capping(GO:0051694)
1.2	6.1	GO:0051121	hepoxilin metabolic process(GO:0051121) hepoxilin biosynthetic process(GO:0051122)
1.1	3.4	GO:0043313	response to symbiotic bacterium(GO:0009609) regulation of neutrophil degranulation(GO:0043313)
1.0	4.1	GO:0060051	negative regulation of protein glycosylation(GO:0060051)
1.0	9.0	GO:0030644	cellular chloride ion homeostasis(GO:0030644)
1.0	5.0	GO:1904045	cellular response to aldosterone(GO:1904045)
0.9	2.6	GO:0071929	alpha-tubulin acetylation(GO:0071929)
0.8	2.4	GO:0090158	endoplasmic reticulum membrane organization(GO:0090158)
0.8	3.9	GO:0015780	nucleotide-sugar transport(GO:0015780)
0.8	3.1	GO:0060178	regulation of exocyst localization(GO:0060178)
0.8	2.3	GO:1900095	random inactivation of X chromosome(GO:0060816) regulation of dosage compensation by inactivation of X chromosome(GO:1900095)
0.7	2.8	GO:1904059	regulation of locomotor rhythm(GO:1904059)
0.7	7.7	GO:0007182	common-partner SMAD protein phosphorylation(GO:0007182)
0.7	2.7	GO:0042891	antibiotic transport(GO:0042891)
0.7	2.0	GO:0032915	positive regulation of transforming growth factor beta2 production(GO:0032915)
0.6	2.6	GO:0060474	positive regulation of sperm motility involved in capacitation(GO:0060474)
0.6	4.9	GO:0019800	peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
0.6	7.3	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.6	3.0	GO:0033132	negative regulation of glucokinase activity(GO:0033132) negative regulation of hexokinase activity(GO:1903300)
0.6	3.6	GO:0006102	isocitrate metabolic process(GO:0006102)
0.6	7.1	GO:0007028	cytoplasm organization(GO:0007028)
0.5	2.2	GO:0072076	nephrogenic mesenchyme development(GO:0072076) pattern specification involved in metanephros development(GO:0072268)
0.5	2.2	GO:0021740	trigeminal sensory nucleus development(GO:0021730) principal sensory nucleus of trigeminal nerve development(GO:0021740)
0.5	2.2	GO:0099545	retrograde trans-synaptic signaling by soluble gas(GO:0098923) trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by trans-synaptic complex(GO:0099545)
0.5	3.2	GO:0090367	negative regulation of mRNA modification(GO:0090367)
0.5	2.0	GO:0097018	cellular response to vitamin K(GO:0071307) renal albumin absorption(GO:0097018) regulation of renal albumin absorption(GO:2000532) negative regulation of dendritic cell apoptotic process(GO:2000669)
0.5	2.3	GO:2000574	regulation of microtubule motor activity(GO:2000574)
0.5	2.7	GO:0038096	immune response-regulating cell surface receptor signaling pathway involved in phagocytosis(GO:0002433) Fc-gamma receptor signaling pathway involved in phagocytosis(GO:0038096)
0.4	5.7	GO:0051151	negative regulation of smooth muscle cell differentiation(GO:0051151)
0.4	7.3	GO:0016339	calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.4	7.0	GO:0051085	chaperone mediated protein folding requiring cofactor(GO:0051085)
0.4	5.3	GO:0007614	short-term memory(GO:0007614)
0.4	4.2	GO:0007258	JUN phosphorylation(GO:0007258)
0.4	7.9	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle(GO:0010971)
0.4	2.6	GO:0007144	female meiosis I(GO:0007144)
0.4	1.4	GO:0001682	tRNA 5'-leader removal(GO:0001682)
0.3	5.6	GO:0032780	negative regulation of ATPase activity(GO:0032780)
0.3	2.0	GO:0060510	Type II pneumocyte differentiation(GO:0060510)
0.3	4.6	GO:0043374	CD8-positive, alpha-beta T cell differentiation(GO:0043374)
0.3	1.0	GO:0033540	fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.3	4.5	GO:0045647	negative regulation of erythrocyte differentiation(GO:0045647)
0.3	1.9	GO:0045341	MHC class I biosynthetic process(GO:0045341) regulation of MHC class I biosynthetic process(GO:0045343) positive regulation of MHC class I biosynthetic process(GO:0045345)
0.3	2.2	GO:2000002	negative regulation of DNA damage checkpoint(GO:2000002)
0.3	1.9	GO:0002339	B cell selection(GO:0002339) post-embryonic camera-type eye morphogenesis(GO:0048597)
0.3	1.9	GO:0099526	presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526)
0.3	2.1	GO:0006621	protein retention in ER lumen(GO:0006621)
0.3	2.0	GO:0061484	hematopoietic stem cell homeostasis(GO:0061484)
0.3	3.2	GO:0006108	malate metabolic process(GO:0006108)
0.3	1.5	GO:0046836	glycolipid transport(GO:0046836)
0.2	0.7	GO:0061741	vacuolar transmembrane transport(GO:0034486) chaperone-mediated protein transport involved in chaperone-mediated autophagy(GO:0061741)
0.2	1.4	GO:2000819	regulation of nucleotide-excision repair(GO:2000819)
0.2	2.1	GO:1900364	negative regulation of mRNA polyadenylation(GO:1900364)
0.2	2.0	GO:1902414	protein localization to cell junction(GO:1902414)
0.2	2.4	GO:0033601	positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.2	3.1	GO:0030238	male sex determination(GO:0030238)
0.2	8.5	GO:0046470	phosphatidylcholine metabolic process(GO:0046470)
0.2	1.0	GO:0007197	adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway(GO:0007197) phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway(GO:0007207)
0.2	4.8	GO:0010719	negative regulation of epithelial to mesenchymal transition(GO:0010719)
0.2	0.9	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.2	6.9	GO:0051693	actin filament capping(GO:0051693)
0.2	3.1	GO:0000185	activation of MAPKKK activity(GO:0000185)
0.2	5.9	GO:0015991	ATP hydrolysis coupled proton transport(GO:0015991)
0.2	2.1	GO:1902902	negative regulation of autophagosome assembly(GO:1902902)
0.2	0.9	GO:1902109	negative regulation of mitochondrial membrane permeability involved in apoptotic process(GO:1902109)
0.2	1.1	GO:2000210	positive regulation of anoikis(GO:2000210)
0.1	1.2	GO:0016576	histone dephosphorylation(GO:0016576)
0.1	2.8	GO:0016578	histone deubiquitination(GO:0016578)
0.1	6.6	GO:0050798	activated T cell proliferation(GO:0050798)
0.1	0.7	GO:2000507	positive regulation of energy homeostasis(GO:2000507)
0.1	2.2	GO:0060218	hematopoietic stem cell differentiation(GO:0060218)
0.1	3.3	GO:0048172	regulation of short-term neuronal synaptic plasticity(GO:0048172)
0.1	2.4	GO:0022010	central nervous system myelination(GO:0022010) axon ensheathment in central nervous system(GO:0032291)
0.1	5.0	GO:0045739	positive regulation of DNA repair(GO:0045739)
0.1	1.4	GO:0098870	neuronal action potential propagation(GO:0019227) action potential propagation(GO:0098870)
0.1	2.0	GO:0097094	craniofacial suture morphogenesis(GO:0097094)
0.1	3.2	GO:0060765	regulation of androgen receptor signaling pathway(GO:0060765)
0.1	9.7	GO:0032091	negative regulation of protein binding(GO:0032091)
0.1	0.7	GO:0048227	plasma membrane to endosome transport(GO:0048227)
0.1	0.7	GO:0071377	cellular response to glucagon stimulus(GO:0071377)
0.1	0.4	GO:0071000	response to magnetism(GO:0071000)
0.1	19.9	GO:0001889	liver development(GO:0001889)
0.1	0.9	GO:0034975	protein folding in endoplasmic reticulum(GO:0034975)
0.1	2.3	GO:0061003	positive regulation of dendritic spine morphogenesis(GO:0061003)
0.1	3.3	GO:0050891	multicellular organismal water homeostasis(GO:0050891)
0.1	1.3	GO:0080182	histone H3-K4 trimethylation(GO:0080182)
0.1	0.8	GO:2000773	negative regulation of cellular senescence(GO:2000773)
0.1	1.2	GO:0090026	positive regulation of monocyte chemotaxis(GO:0090026)
0.1	1.8	GO:0007202	activation of phospholipase C activity(GO:0007202)
0.1	1.5	GO:0000027	ribosomal large subunit assembly(GO:0000027)
0.1	1.7	GO:0000387	spliceosomal snRNP assembly(GO:0000387)
0.0	1.9	GO:0007026	negative regulation of microtubule depolymerization(GO:0007026)
0.0	4.1	GO:0090630	activation of GTPase activity(GO:0090630)
0.0	0.5	GO:0039702	viral budding via host ESCRT complex(GO:0039702)
0.0	6.2	GO:0031032	actomyosin structure organization(GO:0031032)
0.0	0.6	GO:0061001	regulation of dendritic spine morphogenesis(GO:0061001)
0.0	0.3	GO:0036444	calcium ion transmembrane import into mitochondrion(GO:0036444)
0.0	1.7	GO:0060976	coronary vasculature development(GO:0060976)
0.0	3.9	GO:0030178	negative regulation of Wnt signaling pathway(GO:0030178)
0.0	2.1	GO:0071277	cellular response to calcium ion(GO:0071277)
0.0	0.7	GO:0016226	iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0	0.2	GO:0006032	chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032)
0.0	2.3	GO:0045445	myoblast differentiation(GO:0045445)
0.0	0.5	GO:0045745	positive regulation of G-protein coupled receptor protein signaling pathway(GO:0045745)
0.0	9.6	GO:0043547	positive regulation of GTPase activity(GO:0043547)
0.0	0.1	GO:1901621	negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning(GO:1901621)
0.0	1.4	GO:0002181	cytoplasmic translation(GO:0002181)
0.0	1.3	GO:0032088	negative regulation of NF-kappaB transcription factor activity(GO:0032088)
0.0	1.3	GO:0070206	protein trimerization(GO:0070206)
0.0	0.6	GO:0000028	ribosomal small subunit assembly(GO:0000028)
0.0	2.4	GO:0007219	Notch signaling pathway(GO:0007219)
0.0	1.5	GO:0021549	cerebellum development(GO:0021549)
0.0	0.0	GO:0032066	nucleolus to nucleoplasm transport(GO:0032066)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
1.5	14.6	GO:0008091	spectrin(GO:0008091) cuticular plate(GO:0032437)
1.4	4.2	GO:0044302	dentate gyrus mossy fiber(GO:0044302)
1.4	5.5	GO:1990584	cardiac Troponin complex(GO:1990584)
1.3	5.0	GO:1990812	growth cone lamellipodium(GO:1990761) growth cone filopodium(GO:1990812)
1.2	6.1	GO:0046696	lipopolysaccharide receptor complex(GO:0046696)
1.1	6.3	GO:0097512	cardiac myofibril(GO:0097512)
1.1	3.2	GO:1990826	nucleoplasmic periphery of the nuclear pore complex(GO:1990826)
0.6	2.6	GO:0097427	microtubule bundle(GO:0097427)
0.6	1.9	GO:1990257	piccolo-bassoon transport vesicle(GO:1990257)
0.5	2.1	GO:0032044	DSIF complex(GO:0032044)
0.5	2.4	GO:0071256	Sec61 translocon complex(GO:0005784) translocon complex(GO:0071256)
0.5	5.8	GO:0033180	proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.5	3.3	GO:0097524	sperm plasma membrane(GO:0097524)
0.5	1.4	GO:0000172	ribonuclease MRP complex(GO:0000172)
0.4	6.6	GO:0005751	mitochondrial respiratory chain complex IV(GO:0005751)
0.3	4.0	GO:0005687	U4 snRNP(GO:0005687)
0.3	3.1	GO:0042788	polysomal ribosome(GO:0042788)
0.3	1.1	GO:0031074	nucleocytoplasmic shuttling complex(GO:0031074)
0.2	2.0	GO:0032584	growth cone membrane(GO:0032584)
0.2	4.9	GO:0005614	interstitial matrix(GO:0005614)
0.2	1.6	GO:0042382	paraspeckles(GO:0042382)
0.2	3.1	GO:0031616	spindle pole centrosome(GO:0031616)
0.2	2.8	GO:0000124	SAGA complex(GO:0000124)
0.2	6.6	GO:0008305	integrin complex(GO:0008305)
0.2	6.2	GO:0005834	heterotrimeric G-protein complex(GO:0005834)
0.1	0.4	GO:0045242	mitochondrial isocitrate dehydrogenase complex (NAD+)(GO:0005962) isocitrate dehydrogenase complex (NAD+)(GO:0045242)
0.1	3.3	GO:0034706	sodium channel complex(GO:0034706)
0.1	2.2	GO:0017146	NMDA selective glutamate receptor complex(GO:0017146)
0.1	1.2	GO:1990635	proximal dendrite(GO:1990635)
0.1	1.7	GO:0097431	mitotic spindle pole(GO:0097431)
0.1	0.3	GO:0005745	m-AAA complex(GO:0005745)
0.1	1.3	GO:0072357	PTW/PP1 phosphatase complex(GO:0072357)
0.1	9.4	GO:0099501	synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501)
0.1	10.0	GO:0005902	microvillus(GO:0005902)
0.1	21.2	GO:0043209	myelin sheath(GO:0043209)
0.1	0.9	GO:0072546	ER membrane protein complex(GO:0072546)
0.1	4.9	GO:0005881	cytoplasmic microtubule(GO:0005881)
0.1	2.7	GO:0008180	COP9 signalosome(GO:0008180)
0.1	11.1	GO:0001650	fibrillar center(GO:0001650)
0.1	0.4	GO:0046581	intercellular canaliculus(GO:0046581)
0.1	2.0	GO:0035861	site of double-strand break(GO:0035861)
0.1	1.9	GO:0031307	integral component of mitochondrial outer membrane(GO:0031307)
0.1	6.5	GO:0016605	PML body(GO:0016605)
0.1	3.2	GO:0016328	lateral plasma membrane(GO:0016328)
0.1	0.5	GO:0000815	ESCRT III complex(GO:0000815)
0.1	4.3	GO:0005758	mitochondrial intermembrane space(GO:0005758)
0.1	1.0	GO:0032279	asymmetric synapse(GO:0032279)
0.1	2.2	GO:0043198	dendritic shaft(GO:0043198)
0.1	2.3	GO:0010494	cytoplasmic stress granule(GO:0010494)
0.1	9.6	GO:0043197	dendritic spine(GO:0043197)
0.0	1.2	GO:0005839	proteasome core complex(GO:0005839)
0.0	18.2	GO:0005667	transcription factor complex(GO:0005667)
0.0	2.7	GO:0031526	brush border membrane(GO:0031526)
0.0	2.1	GO:0032587	ruffle membrane(GO:0032587)
0.0	2.9	GO:0022625	cytosolic large ribosomal subunit(GO:0022625)
0.0	8.0	GO:0005759	mitochondrial matrix(GO:0005759)
0.0	2.5	GO:0071013	catalytic step 2 spliceosome(GO:0071013)
0.0	2.6	GO:0000922	spindle pole(GO:0000922)
0.0	2.1	GO:0016363	nuclear matrix(GO:0016363)
0.0	2.9	GO:0030426	growth cone(GO:0030426)
0.0	0.7	GO:0045334	clathrin-coated endocytic vesicle(GO:0045334)
0.0	8.1	GO:0098794	postsynapse(GO:0098794)
0.0	2.0	GO:0005604	basement membrane(GO:0005604)
0.0	3.7	GO:0016323	basolateral plasma membrane(GO:0016323)
0.0	1.5	GO:0008076	voltage-gated potassium channel complex(GO:0008076)
0.0	4.4	GO:0005925	focal adhesion(GO:0005925)
0.0	0.4	GO:0030964	mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
2.7	18.8	GO:0004111	creatine kinase activity(GO:0004111)
1.7	3.4	GO:0001875	lipopolysaccharide receptor activity(GO:0001875)
1.4	8.5	GO:0008970	phosphatidylcholine 1-acylhydrolase activity(GO:0008970)
1.4	5.5	GO:0030172	troponin C binding(GO:0030172)
1.2	6.1	GO:0034186	apolipoprotein A-I binding(GO:0034186)
1.0	3.1	GO:0051538	3 iron, 4 sulfur cluster binding(GO:0051538)
0.9	2.7	GO:0042895	antibiotic transporter activity(GO:0042895)
0.8	4.1	GO:0004563	beta-N-acetylhexosaminidase activity(GO:0004563)
0.8	3.2	GO:0030060	L-malate dehydrogenase activity(GO:0030060)
0.8	2.4	GO:0019807	aspartoacylase activity(GO:0019807)
0.8	3.1	GO:0050682	AF-2 domain binding(GO:0050682)
0.8	5.4	GO:0004064	arylesterase activity(GO:0004064)
0.7	6.1	GO:0047498	calcium-dependent phospholipase A2 activity(GO:0047498)
0.7	10.2	GO:0005523	tropomyosin binding(GO:0005523)
0.7	3.9	GO:0005338	nucleotide-sugar transmembrane transporter activity(GO:0005338)
0.6	11.1	GO:0001222	transcription corepressor binding(GO:0001222)
0.6	5.0	GO:0016174	NAD(P)H oxidase activity(GO:0016174)
0.5	4.9	GO:0008381	mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.5	3.7	GO:0005078	MAP-kinase scaffold activity(GO:0005078)
0.5	3.1	GO:0008349	MAP kinase kinase kinase kinase activity(GO:0008349)
0.5	2.0	GO:0070579	methylcytosine dioxygenase activity(GO:0070579)
0.5	1.4	GO:0000171	ribonuclease MRP activity(GO:0000171)
0.4	2.1	GO:0046923	ER retention sequence binding(GO:0046923)
0.4	3.2	GO:1990247	N6-methyladenosine-containing RNA binding(GO:1990247)
0.4	12.8	GO:0001103	RNA polymerase II repressing transcription factor binding(GO:0001103)
0.4	2.6	GO:0019957	C-C chemokine binding(GO:0019957)
0.4	2.6	GO:0004468	lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468)
0.4	3.3	GO:0015280	ligand-gated sodium channel activity(GO:0015280)
0.3	12.5	GO:0048020	CCR chemokine receptor binding(GO:0048020)
0.3	2.6	GO:0030368	interleukin-17 receptor activity(GO:0030368)
0.3	2.7	GO:0005168	neurotrophin TRKA receptor binding(GO:0005168)
0.3	2.2	GO:0017070	U6 snRNA binding(GO:0017070) U4 snRNA binding(GO:0030621)
0.3	5.8	GO:0048156	tau protein binding(GO:0048156)
0.2	4.1	GO:0008253	5'-nucleotidase activity(GO:0008253)
0.2	6.4	GO:0005328	neurotransmitter:sodium symporter activity(GO:0005328)
0.2	6.6	GO:0016676	cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.2	2.0	GO:0008140	cAMP response element binding protein binding(GO:0008140)
0.2	6.1	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.2	1.0	GO:0016907	G-protein coupled acetylcholine receptor activity(GO:0016907)
0.2	1.2	GO:0016493	C-C chemokine receptor activity(GO:0016493)
0.2	1.0	GO:0003997	acyl-CoA oxidase activity(GO:0003997)
0.2	1.5	GO:0004565	beta-galactosidase activity(GO:0004565)
0.2	1.7	GO:1990446	U1 snRNP binding(GO:1990446)
0.2	4.0	GO:0046961	proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.2	0.9	GO:0004416	hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2	0.7	GO:0004967	glucagon receptor activity(GO:0004967)
0.2	11.3	GO:0030971	receptor tyrosine kinase binding(GO:0030971)
0.2	2.2	GO:0042043	neurexin family protein binding(GO:0042043)
0.2	14.4	GO:0005200	structural constituent of cytoskeleton(GO:0005200)
0.1	6.9	GO:0030507	spectrin binding(GO:0030507)
0.1	0.9	GO:0003988	acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1	1.9	GO:0051400	BH domain binding(GO:0051400)
0.1	0.4	GO:0004449	isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.1	33.4	GO:0001077	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077)
0.1	2.4	GO:0070491	repressing transcription factor binding(GO:0070491)
0.1	21.2	GO:0005096	GTPase activator activity(GO:0005096)
0.1	2.1	GO:0043015	gamma-tubulin binding(GO:0043015)
0.1	6.4	GO:0051087	chaperone binding(GO:0051087)
0.1	14.0	GO:0001227	transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1	5.1	GO:0001046	core promoter sequence-specific DNA binding(GO:0001046)
0.1	2.8	GO:0001047	core promoter binding(GO:0001047)
0.1	1.3	GO:0042800	histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1	1.2	GO:0004198	calcium-dependent cysteine-type endopeptidase activity(GO:0004198)
0.0	2.2	GO:0030374	ligand-dependent nuclear receptor transcription coactivator activity(GO:0030374)
0.0	1.2	GO:0001965	G-protein alpha-subunit binding(GO:0001965)
0.0	0.4	GO:0071253	connexin binding(GO:0071253)
0.0	1.2	GO:0004298	threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0	1.9	GO:0033613	activating transcription factor binding(GO:0033613)
0.0	2.5	GO:0003724	RNA helicase activity(GO:0003724) ATP-dependent RNA helicase activity(GO:0004004)
0.0	0.1	GO:0004691	cAMP-dependent protein kinase activity(GO:0004691)
0.0	0.5	GO:0047555	3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555)
0.0	1.8	GO:0008188	neuropeptide receptor activity(GO:0008188)
0.0	0.2	GO:0008432	JUN kinase binding(GO:0008432)
0.0	0.2	GO:0004568	chitinase activity(GO:0004568)
0.0	0.8	GO:0051059	NF-kappaB binding(GO:0051059)
0.0	1.5	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors(GO:0016667)
0.0	1.9	GO:0005518	collagen binding(GO:0005518)
0.0	2.9	GO:0030165	PDZ domain binding(GO:0030165)
0.0	0.6	GO:0048027	mRNA 5'-UTR binding(GO:0048027)
0.0	0.7	GO:0051539	4 iron, 4 sulfur cluster binding(GO:0051539)
0.0	2.8	GO:0003774	motor activity(GO:0003774)
0.0	0.6	GO:0004364	glutathione transferase activity(GO:0004364)
0.0	1.4	GO:0003697	single-stranded DNA binding(GO:0003697)
0.0	1.5	GO:0005249	voltage-gated potassium channel activity(GO:0005249)
0.0	2.5	GO:0008017	microtubule binding(GO:0008017)
0.0	2.1	GO:0005085	guanyl-nucleotide exchange factor activity(GO:0005085)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.5	9.2	PID CIRCADIAN PATHWAY	Circadian rhythm pathway
0.3	2.6	SA G2 AND M PHASES	Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.
0.3	6.1	PID TOLL ENDOGENOUS PATHWAY	Endogenous TLR signaling
0.2	6.6	PID INTEGRIN CS PATHWAY	Integrin family cell surface interactions
0.2	2.7	PID S1P S1P4 PATHWAY	S1P4 pathway
0.2	3.1	PID ERB GENOMIC PATHWAY	Validated nuclear estrogen receptor beta network
0.2	6.4	SA B CELL RECEPTOR COMPLEXES	Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases.
0.2	12.8	PID HES HEY PATHWAY	Notch-mediated HES/HEY network
0.2	10.2	PID ANGIOPOIETIN RECEPTOR PATHWAY	Angiopoietin receptor Tie2-mediated signaling
0.2	5.0	PID CERAMIDE PATHWAY	Ceramide signaling pathway
0.2	4.2	ST GRANULE CELL SURVIVAL PATHWAY	Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.1	10.0	PID REG GR PATHWAY	Glucocorticoid receptor regulatory network
0.1	6.0	PID ATF2 PATHWAY	ATF-2 transcription factor network
0.1	7.1	PID CASPASE PATHWAY	Caspase cascade in apoptosis
0.1	1.9	SA PROGRAMMED CELL DEATH	Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.1	7.7	PID TGFBR PATHWAY	TGF-beta receptor signaling
0.1	3.9	ST WNT BETA CATENIN PATHWAY	Wnt/beta-catenin Pathway
0.1	3.1	PID TNF PATHWAY	TNF receptor signaling pathway
0.1	11.6	PID P53 DOWNSTREAM PATHWAY	Direct p53 effectors
0.1	3.8	PID ERA GENOMIC PATHWAY	Validated nuclear estrogen receptor alpha network
0.1	4.2	PID TRKR PATHWAY	Neurotrophic factor-mediated Trk receptor signaling
0.1	2.1	PID RAS PATHWAY	Regulation of Ras family activation
0.1	3.2	PID TELOMERASE PATHWAY	Regulation of Telomerase
0.0	2.9	PID CMYB PATHWAY	C-MYB transcription factor network
0.0	0.5	ST WNT CA2 CYCLIC GMP PATHWAY	Wnt/Ca2+/cyclic GMP signaling.
0.0	0.4	PID NEPHRIN NEPH1 PATHWAY	Nephrin/Neph1 signaling in the kidney podocyte
0.0	5.0	NABA ECM GLYCOPROTEINS	Genes encoding structural ECM glycoproteins
0.0	0.7	PID E2F PATHWAY	E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.7	29.1	REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION	Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.6	2.6	REACTOME BETA DEFENSINS	Genes involved in Beta defensins
0.6	10.0	REACTOME TIE2 SIGNALING	Genes involved in Tie2 Signaling
0.6	16.8	REACTOME NEPHRIN INTERACTIONS	Genes involved in Nephrin interactions
0.4	8.9	REACTOME SIGNALING BY FGFR1 FUSION MUTANTS	Genes involved in Signaling by FGFR1 fusion mutants
0.4	6.1	REACTOME ACYL CHAIN REMODELLING OF PS	Genes involved in Acyl chain remodelling of PS
0.2	11.3	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.2	5.8	REACTOME INSULIN RECEPTOR RECYCLING	Genes involved in Insulin receptor recycling
0.2	3.1	REACTOME CITRIC ACID CYCLE TCA CYCLE	Genes involved in Citric acid cycle (TCA cycle)
0.2	2.6	REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION	Genes involved in Cyclin A/B1 associated events during G2/M transition
0.2	1.7	REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS	Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.1	5.6	REACTOME REGULATION OF INSULIN SECRETION BY GLUCAGON LIKE PEPTIDE1	Genes involved in Regulation of Insulin Secretion by Glucagon-like Peptide-1
0.1	2.2	REACTOME RAP1 SIGNALLING	Genes involved in Rap1 signalling
0.1	2.0	REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS	Genes involved in Activation of the AP-1 family of transcription factors
0.1	12.8	REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION	Genes involved in Factors involved in megakaryocyte development and platelet production
0.1	2.1	REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT	Genes involved in Abortive elongation of HIV-1 transcript in the absence of Tat
0.1	4.7	REACTOME INTERFERON GAMMA SIGNALING	Genes involved in Interferon gamma signaling
0.1	1.0	REACTOME ALPHA LINOLENIC ACID ALA METABOLISM	Genes involved in alpha-linolenic acid (ALA) metabolism
0.1	6.0	REACTOME RESPIRATORY ELECTRON TRANSPORT	Genes involved in Respiratory electron transport
0.1	6.6	REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL	Genes involved in Cell surface interactions at the vascular wall
0.1	3.1	REACTOME GLUCONEOGENESIS	Genes involved in Gluconeogenesis
0.1	0.7	REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR	Genes involved in Signaling by constitutively active EGFR
0.1	1.4	REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS	Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.1	1.9	REACTOME INTRINSIC PATHWAY FOR APOPTOSIS	Genes involved in Intrinsic Pathway for Apoptosis
0.0	10.0	REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES	Genes involved in Metabolism of amino acids and derivatives
0.0	2.1	REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S	Genes involved in Activation of Chaperone Genes by XBP1(S)
0.0	1.4	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions
0.0	1.5	REACTOME GLYCOSPHINGOLIPID METABOLISM	Genes involved in Glycosphingolipid metabolism
0.0	1.0	REACTOME AMINE LIGAND BINDING RECEPTORS	Genes involved in Amine ligand-binding receptors
0.0	5.4	REACTOME G ALPHA I SIGNALLING EVENTS	Genes involved in G alpha (i) signalling events
0.0	2.0	REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY	Genes involved in Nuclear Receptor transcription pathway
0.0	0.2	REACTOME SIGNAL REGULATORY PROTEIN SIRP FAMILY INTERACTIONS	Genes involved in Signal regulatory protein (SIRP) family interactions
0.0	0.4	REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS	Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0	3.8	REACTOME SIGNALING BY RHO GTPASES	Genes involved in Signaling by Rho GTPases
0.0	2.6	REACTOME GENERIC TRANSCRIPTION PATHWAY	Genes involved in Generic Transcription Pathway
0.0	2.6	REACTOME MRNA SPLICING	Genes involved in mRNA Splicing
0.0	0.7	REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS	Genes involved in Apoptotic cleavage of cellular proteins
0.0	0.6	REACTOME GLUTATHIONE CONJUGATION	Genes involved in Glutathione conjugation
0.0	0.5	REACTOME MITOCHONDRIAL PROTEIN IMPORT	Genes involved in Mitochondrial Protein Import